EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000015801 (Gene tree)
Gene ID: 109525492
Gene Symbol: zgc:162730
Alias: fi61b04|wu:fi61b04
Full Name: mRNA decay activator protein ZFP36L1-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2720 bases
Position: chrKV880244.1:1088267-1090986
Accession: 109525492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000025567	zf-CCCH	PF00642.24	3.7e-21	1	2
ENSHCOP00000025567	zf-CCCH	PF00642.24	3.7e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000019875	-	2397	XM_019886029	ENSHCOP00000025567	429 (aa)	XP_019741588	UPI00094E56EC

Gene Model

Click here to download ENSHCOG00000015801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015801's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000015801	zgc:162730	66	35.179	ENSHCOG00000000792	sb:cb81	76	36.389

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015801	zgc:162730	100	75.870	ENSAPOG00000014920	zgc:162730	100	76.102	Acanthochromis_polyacanthus
ENSHCOG00000015801	zgc:162730	59	64.427	ENSACIG00000017366	zgc:162730	97	63.241	Amphilophus_citrinellus
ENSHCOG00000015801	zgc:162730	67	36.877	ENSACIG00000009027	sb:cb81	83	36.908	Amphilophus_citrinellus
ENSHCOG00000015801	zgc:162730	100	76.102	ENSAOCG00000002001	zgc:162730	100	76.334	Amphiprion_ocellaris
ENSHCOG00000015801	zgc:162730	94	76.296	ENSAPEG00000015490	zgc:162730	98	76.543	Amphiprion_percula
ENSHCOG00000015801	zgc:162730	100	72.120	ENSATEG00000008790	zgc:162730	100	72.644	Anabas_testudineus
ENSHCOG00000015801	zgc:162730	69	38.835	ENSATEG00000003462	sb:cb81	84	36.272	Anabas_testudineus
ENSHCOG00000015801	zgc:162730	66	38.542	ENSACLG00000013759	sb:cb81	82	37.659	Astatotilapia_calliptera
ENSHCOG00000015801	zgc:162730	100	66.975	ENSACLG00000022112	zgc:162730	89	71.850	Astatotilapia_calliptera
ENSHCOG00000015801	zgc:162730	68	41.290	ENSAMXG00000034874	sb:cb81	75	39.306	Astyanax_mexicanus
ENSHCOG00000015801	zgc:162730	100	42.890	ENSAMXG00000035945	zgc:162730	87	46.438	Astyanax_mexicanus
ENSHCOG00000015801	zgc:162730	88	32.754	ENSCSEG00000014426	sb:cb81	71	35.644	Cynoglossus_semilaevis
ENSHCOG00000015801	zgc:162730	98	69.575	ENSCSEG00000018283	zgc:162730	100	63.256	Cynoglossus_semilaevis
ENSHCOG00000015801	zgc:162730	100	69.444	ENSCVAG00000018571	zgc:162730	100	68.213	Cyprinodon_variegatus
ENSHCOG00000015801	zgc:162730	100	42.857	ENSDARG00000103720	zgc:162730	91	49.202	Danio_rerio
ENSHCOG00000015801	zgc:162730	83	35.789	ENSELUG00000013045	sb:cb81	80	36.053	Esox_lucius
ENSHCOG00000015801	zgc:162730	100	51.389	ENSELUG00000013158	zgc:162730	100	53.241	Esox_lucius
ENSHCOG00000015801	zgc:162730	55	40.336	ENSELUG00000013151	zgc:114130	53	41.841	Esox_lucius
ENSHCOG00000015801	zgc:162730	100	69.676	ENSFHEG00000013710	zgc:162730	100	68.445	Fundulus_heteroclitus
ENSHCOG00000015801	zgc:162730	79	66.176	ENSGMOG00000017242	zgc:162730	98	66.471	Gadus_morhua
ENSHCOG00000015801	zgc:162730	100	69.838	ENSGAFG00000009953	zgc:162730	100	69.142	Gambusia_affinis
ENSHCOG00000015801	zgc:162730	71	37.459	ENSGAFG00000015700	sb:cb81	69	41.613	Gambusia_affinis
ENSHCOG00000015801	zgc:162730	83	34.127	ENSGACG00000013400	sb:cb81	98	37.795	Gasterosteus_aculeatus
ENSHCOG00000015801	zgc:162730	75	71.605	ENSGACG00000008351	zgc:162730	98	72.271	Gasterosteus_aculeatus
ENSHCOG00000015801	zgc:162730	66	38.542	ENSHBUG00000002383	sb:cb81	63	41.368	Haplochromis_burtoni
ENSHCOG00000015801	zgc:162730	100	66.744	ENSHBUG00000015057	zgc:162730	89	71.582	Haplochromis_burtoni
ENSHCOG00000015801	zgc:162730	50	42.081	ENSIPUG00000011378	sb:cb81	59	42.672	Ictalurus_punctatus
ENSHCOG00000015801	zgc:162730	100	44.084	ENSIPUG00000018248	zgc:162730	85	48.889	Ictalurus_punctatus
ENSHCOG00000015801	zgc:162730	100	67.667	ENSKMAG00000019277	zgc:162730	100	67.206	Kryptolebias_marmoratus
ENSHCOG00000015801	zgc:162730	100	71.034	ENSLBEG00000018380	zgc:162730	100	71.264	Labrus_bergylta
ENSHCOG00000015801	zgc:162730	79	38.177	ENSLACG00000015980	-	63	43.662	Latimeria_chalumnae
ENSHCOG00000015801	zgc:162730	69	43.046	ENSLACG00000015732	sb:cb81	68	43.046	Latimeria_chalumnae
ENSHCOG00000015801	zgc:162730	100	45.497	ENSLOCG00000014597	zgc:162730	86	49.602	Lepisosteus_oculatus
ENSHCOG00000015801	zgc:162730	99	37.385	ENSLOCG00000014587	sb:cb81	80	40.701	Lepisosteus_oculatus
ENSHCOG00000015801	zgc:162730	100	72.622	ENSMAMG00000007516	zgc:162730	99	75.000	Mastacembelus_armatus
ENSHCOG00000015801	zgc:162730	66	38.889	ENSMZEG00005016001	-	82	38.265	Maylandia_zebra
ENSHCOG00000015801	zgc:162730	100	60.648	ENSMZEG00005014415	zgc:162730	97	64.032	Maylandia_zebra
ENSHCOG00000015801	zgc:162730	66	39.373	ENSMZEG00005024684	sb:cb81	82	38.265	Maylandia_zebra
ENSHCOG00000015801	zgc:162730	60	73.643	ENSMMOG00000011506	zgc:162730	99	72.868	Mola_mola
ENSHCOG00000015801	zgc:162730	100	68.981	ENSMALG00000002348	zgc:162730	100	69.907	Monopterus_albus
ENSHCOG00000015801	zgc:162730	66	39.373	ENSNBRG00000006231	sb:cb81	69	41.935	Neolamprologus_brichardi
ENSHCOG00000015801	zgc:162730	100	66.513	ENSNBRG00000013701	zgc:162730	89	71.850	Neolamprologus_brichardi
ENSHCOG00000015801	zgc:162730	69	69.153	ENSONIG00000005003	zgc:162730	99	63.662	Oreochromis_niloticus
ENSHCOG00000015801	zgc:162730	99	58.469	ENSORLG00000027149	zgc:162730	100	60.093	Oryzias_latipes
ENSHCOG00000015801	zgc:162730	99	58.933	ENSORLG00020020289	zgc:162730	100	60.557	Oryzias_latipes_hni
ENSHCOG00000015801	zgc:162730	99	59.259	ENSORLG00015001519	zgc:162730	100	60.880	Oryzias_latipes_hsok
ENSHCOG00000015801	zgc:162730	99	62.005	ENSOMEG00000017752	zgc:162730	86	65.684	Oryzias_melastigma
ENSHCOG00000015801	zgc:162730	68	36.877	ENSOMEG00000020565	sb:cb81	70	40.625	Oryzias_melastigma
ENSHCOG00000015801	zgc:162730	71	34.185	ENSPFOG00000013806	sb:cb81	69	37.695	Poecilia_formosa
ENSHCOG00000015801	zgc:162730	100	70.534	ENSPFOG00000003665	zgc:162730	100	71.031	Poecilia_formosa
ENSHCOG00000015801	zgc:162730	69	34.426	ENSPLAG00000020158	sb:cb81	75	40.193	Poecilia_latipinna
ENSHCOG00000015801	zgc:162730	100	70.534	ENSPLAG00000000946	zgc:162730	100	69.838	Poecilia_latipinna
ENSHCOG00000015801	zgc:162730	71	34.185	ENSPMEG00000022425	sb:cb81	69	37.695	Poecilia_mexicana
ENSHCOG00000015801	zgc:162730	100	70.766	ENSPMEG00000000341	zgc:162730	100	70.070	Poecilia_mexicana
ENSHCOG00000015801	zgc:162730	100	70.534	ENSPREG00000021263	zgc:162730	100	69.838	Poecilia_reticulata
ENSHCOG00000015801	zgc:162730	100	66.975	ENSPNYG00000015553	zgc:162730	89	71.850	Pundamilia_nyererei
ENSHCOG00000015801	zgc:162730	66	38.542	ENSPNYG00000007502	sb:cb81	82	38.220	Pundamilia_nyererei
ENSHCOG00000015801	zgc:162730	100	43.155	ENSPNAG00000023018	zgc:162730	87	46.649	Pygocentrus_nattereri
ENSHCOG00000015801	zgc:162730	99	35.185	ENSPNAG00000030063	sb:cb81	82	37.466	Pygocentrus_nattereri
ENSHCOG00000015801	zgc:162730	83	33.067	ENSSFOG00015003179	sb:cb81	78	33.422	Scleropages_formosus
ENSHCOG00000015801	zgc:162730	100	74.537	ENSSMAG00000018612	zgc:162730	100	74.537	Scophthalmus_maximus
ENSHCOG00000015801	zgc:162730	83	34.840	ENSSDUG00000004426	sb:cb81	78	38.058	Seriola_dumerili
ENSHCOG00000015801	zgc:162730	100	74.483	ENSSDUG00000002247	zgc:162730	100	74.483	Seriola_dumerili
ENSHCOG00000015801	zgc:162730	100	74.483	ENSSLDG00000008502	zgc:162730	100	74.483	Seriola_lalandi_dorsalis
ENSHCOG00000015801	zgc:162730	83	34.840	ENSSLDG00000018035	sb:cb81	79	37.895	Seriola_lalandi_dorsalis
ENSHCOG00000015801	zgc:162730	66	37.801	ENSSPAG00000013546	sb:cb81	84	35.526	Stegastes_partitus
ENSHCOG00000015801	zgc:162730	100	76.798	ENSSPAG00000006851	zgc:162730	100	76.798	Stegastes_partitus
ENSHCOG00000015801	zgc:162730	100	67.674	ENSTRUG00000021229	zgc:162730	100	67.442	Takifugu_rubripes
ENSHCOG00000015801	zgc:162730	66	36.395	ENSTRUG00000020720	sb:cb81	66	40.397	Takifugu_rubripes
ENSHCOG00000015801	zgc:162730	96	62.077	ENSTNIG00000000183	zgc:162730	98	64.286	Tetraodon_nigroviridis
ENSHCOG00000015801	zgc:162730	77	35.277	ENSTNIG00000019802	sb:cb81	90	37.609	Tetraodon_nigroviridis
ENSHCOG00000015801	zgc:162730	66	39.865	ENSXETG00000016987	zfp36l1	68	39.865	Xenopus_tropicalis
ENSHCOG00000015801	zgc:162730	62	30.258	ENSXCOG00000010688	sb:cb81	86	35.766	Xiphophorus_couchianus
ENSHCOG00000015801	zgc:162730	100	70.465	ENSXCOG00000012791	zgc:162730	100	69.767	Xiphophorus_couchianus
ENSHCOG00000015801	zgc:162730	100	70.465	ENSXMAG00000018206	zgc:162730	100	69.767	Xiphophorus_maculatus
ENSHCOG00000015801	zgc:162730	84	34.254	ENSXMAG00000004681	sb:cb81	79	38.904	Xiphophorus_maculatus