EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000015815 (Gene tree)
Gene ID: 109530905
Gene Symbol: cnot4a
Alias: si:dkey-230e6.2
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 14151 bases
Position: chrKV880407.1:1484926-1499076
Accession: 109530905
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000012721	RRM_1	PF00076.22	3.3e-05	1	1
ENSHCOP00000025741	RRM_1	PF00076.22	3.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000019825	-	2157	-	ENSHCOP00000012721	718 (aa)	-	-
ENSHCOT00000027045	-	5218	XM_019894868	ENSHCOP00000025741	798 (aa)	XP_019750427	UPI00094EC170

Gene Model

Click here to download ENSHCOG00000015815's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015815's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015815	cnot4a	91	89.434	ENSG00000080802	CNOT4	98	89.434	Homo_sapiens
ENSHCOG00000015815	cnot4a	94	98.148	ENSAPOG00000016272	cnot4a	96	98.148	Acanthochromis_polyacanthus
ENSHCOG00000015815	cnot4a	92	89.048	ENSAMEG00000012081	CNOT4	90	89.048	Ailuropoda_melanoleuca
ENSHCOG00000015815	cnot4a	100	98.148	ENSACIG00000003011	cnot4a	92	98.148	Amphilophus_citrinellus
ENSHCOG00000015815	cnot4a	100	97.778	ENSAOCG00000010792	cnot4a	99	97.778	Amphiprion_ocellaris
ENSHCOG00000015815	cnot4a	100	97.778	ENSAPEG00000004680	cnot4a	99	97.778	Amphiprion_percula
ENSHCOG00000015815	cnot4a	100	97.778	ENSATEG00000017580	cnot4a	100	92.066	Anabas_testudineus
ENSHCOG00000015815	cnot4a	100	69.619	ENSAPLG00000016441	CNOT4	100	69.127	Anas_platyrhynchos
ENSHCOG00000015815	cnot4a	100	69.373	ENSACAG00000011154	CNOT4	100	68.881	Anolis_carolinensis
ENSHCOG00000015815	cnot4a	91	89.434	ENSANAG00000032156	CNOT4	98	89.434	Aotus_nancymaae
ENSHCOG00000015815	cnot4a	100	98.148	ENSACLG00000002514	cnot4a	99	98.148	Astatotilapia_calliptera
ENSHCOG00000015815	cnot4a	100	91.144	ENSAMXG00000011473	cnot4b	99	91.111	Astyanax_mexicanus
ENSHCOG00000015815	cnot4a	82	94.444	ENSAMXG00000001373	cnot4a	93	90.526	Astyanax_mexicanus
ENSHCOG00000015815	cnot4a	100	71.390	ENSBTAG00000017919	CNOT4	99	87.226	Bos_taurus
ENSHCOG00000015815	cnot4a	91	89.434	ENSCJAG00000012532	CNOT4	98	89.434	Callithrix_jacchus
ENSHCOG00000015815	cnot4a	91	89.434	ENSCAFG00000003223	CNOT4	98	89.434	Canis_familiaris
ENSHCOG00000015815	cnot4a	84	89.434	ENSCAFG00020000093	CNOT4	98	89.434	Canis_lupus_dingo
ENSHCOG00000015815	cnot4a	92	87.226	ENSCHIG00000010955	CNOT4	98	89.434	Capra_hircus
ENSHCOG00000015815	cnot4a	91	89.434	ENSTSYG00000000893	CNOT4	98	89.434	Carlito_syrichta
ENSHCOG00000015815	cnot4a	91	89.057	ENSCAPG00000006213	CNOT4	98	89.057	Cavia_aperea
ENSHCOG00000015815	cnot4a	91	89.434	ENSCPOG00000011526	CNOT4	98	89.434	Cavia_porcellus
ENSHCOG00000015815	cnot4a	92	87.226	ENSCCAG00000024414	CNOT4	94	93.013	Cebus_capucinus
ENSHCOG00000015815	cnot4a	92	87.226	ENSCATG00000022607	CNOT4	99	87.226	Cercocebus_atys
ENSHCOG00000015815	cnot4a	91	89.434	ENSCLAG00000001857	CNOT4	98	89.434	Chinchilla_lanigera
ENSHCOG00000015815	cnot4a	91	89.434	ENSCSAG00000009096	CNOT4	98	89.434	Chlorocebus_sabaeus
ENSHCOG00000015815	cnot4a	66	92.513	ENSCHOG00000010412	CNOT4	67	92.513	Choloepus_hoffmanni
ENSHCOG00000015815	cnot4a	91	88.192	ENSCPBG00000004959	CNOT4	98	88.192	Chrysemys_picta_bellii
ENSHCOG00000015815	cnot4a	67	68.293	ENSCING00000004364	-	66	68.293	Ciona_intestinalis
ENSHCOG00000015815	cnot4a	92	87.226	ENSCANG00000029319	CNOT4	99	87.226	Colobus_angolensis_palliatus
ENSHCOG00000015815	cnot4a	91	89.434	ENSCGRG00001014651	Cnot4	98	89.434	Cricetulus_griseus_chok1gshd
ENSHCOG00000015815	cnot4a	91	89.434	ENSCGRG00000005727	Cnot4	98	89.434	Cricetulus_griseus_crigri
ENSHCOG00000015815	cnot4a	95	98.148	ENSCSEG00000015080	cnot4a	94	90.432	Cynoglossus_semilaevis
ENSHCOG00000015815	cnot4a	100	96.296	ENSCVAG00000009399	cnot4a	99	95.604	Cyprinodon_variegatus
ENSHCOG00000015815	cnot4a	100	75.773	ENSDARG00000007045	cnot4a	100	76.391	Danio_rerio
ENSHCOG00000015815	cnot4a	100	89.247	ENSDARG00000007639	cnot4b	93	89.247	Danio_rerio
ENSHCOG00000015815	cnot4a	92	87.226	ENSDNOG00000009409	CNOT4	99	87.226	Dasypus_novemcinctus
ENSHCOG00000015815	cnot4a	91	89.434	ENSDORG00000012268	Cnot4	98	89.434	Dipodomys_ordii
ENSHCOG00000015815	cnot4a	100	69.346	ENSETEG00000013407	CNOT4	92	82.117	Echinops_telfairi
ENSHCOG00000015815	cnot4a	85	87.226	ENSEASG00005014430	CNOT4	99	87.226	Equus_asinus_asinus
ENSHCOG00000015815	cnot4a	92	87.226	ENSECAG00000020262	CNOT4	99	87.226	Equus_caballus
ENSHCOG00000015815	cnot4a	99	94.182	ENSELUG00000008742	cnot4a	98	96.241	Esox_lucius
ENSHCOG00000015815	cnot4a	95	91.321	ENSELUG00000011540	cnot4b	94	91.321	Esox_lucius
ENSHCOG00000015815	cnot4a	91	89.434	ENSFCAG00000011904	CNOT4	98	89.434	Felis_catus
ENSHCOG00000015815	cnot4a	100	69.779	ENSFALG00000011194	CNOT4	100	69.042	Ficedula_albicollis
ENSHCOG00000015815	cnot4a	91	89.434	ENSFDAG00000013525	CNOT4	98	89.434	Fukomys_damarensis
ENSHCOG00000015815	cnot4a	100	97.407	ENSFHEG00000006608	cnot4a	99	95.683	Fundulus_heteroclitus
ENSHCOG00000015815	cnot4a	96	75.853	ENSGMOG00000001329	cnot4a	100	75.853	Gadus_morhua
ENSHCOG00000015815	cnot4a	92	87.226	ENSGALG00000011682	CNOT4	99	87.226	Gallus_gallus
ENSHCOG00000015815	cnot4a	100	97.037	ENSGACG00000004276	cnot4a	99	97.037	Gasterosteus_aculeatus
ENSHCOG00000015815	cnot4a	91	88.192	ENSGAGG00000017331	CNOT4	98	88.192	Gopherus_agassizii
ENSHCOG00000015815	cnot4a	84	88.626	ENSGGOG00000000142	CNOT4	97	88.626	Gorilla_gorilla
ENSHCOG00000015815	cnot4a	100	98.148	ENSHBUG00000000027	cnot4a	99	98.148	Haplochromis_burtoni
ENSHCOG00000015815	cnot4a	91	89.434	ENSHGLG00000011533	CNOT4	98	89.434	Heterocephalus_glaber_female
ENSHCOG00000015815	cnot4a	69	87.226	ENSHGLG00100013058	CNOT4	93	87.226	Heterocephalus_glaber_male
ENSHCOG00000015815	cnot4a	100	85.099	ENSIPUG00000006393	cnot4	93	88.772	Ictalurus_punctatus
ENSHCOG00000015815	cnot4a	100	91.144	ENSIPUG00000016994	cnot4b	99	91.111	Ictalurus_punctatus
ENSHCOG00000015815	cnot4a	91	89.434	ENSSTOG00000007717	CNOT4	98	89.434	Ictidomys_tridecemlineatus
ENSHCOG00000015815	cnot4a	67	87.170	ENSJJAG00000019991	-	91	87.170	Jaculus_jaculus
ENSHCOG00000015815	cnot4a	91	89.434	ENSJJAG00000016618	Cnot4	98	89.434	Jaculus_jaculus
ENSHCOG00000015815	cnot4a	94	96.667	ENSKMAG00000004581	cnot4a	99	95.971	Kryptolebias_marmoratus
ENSHCOG00000015815	cnot4a	100	97.407	ENSLBEG00000009999	cnot4a	94	97.407	Labrus_bergylta
ENSHCOG00000015815	cnot4a	100	69.608	ENSLACG00000002647	CNOT4	99	70.183	Latimeria_chalumnae
ENSHCOG00000015815	cnot4a	100	90.476	ENSLOCG00000016126	cnot4a	92	90.476	Lepisosteus_oculatus
ENSHCOG00000015815	cnot4a	92	87.226	ENSLAFG00000000709	CNOT4	99	87.226	Loxodonta_africana
ENSHCOG00000015815	cnot4a	91	89.434	ENSMFAG00000046349	CNOT4	98	89.434	Macaca_fascicularis
ENSHCOG00000015815	cnot4a	92	87.226	ENSMMUG00000016181	CNOT4	99	87.226	Macaca_mulatta
ENSHCOG00000015815	cnot4a	92	87.226	ENSMNEG00000042164	CNOT4	98	89.434	Macaca_nemestrina
ENSHCOG00000015815	cnot4a	92	87.226	ENSMLEG00000032709	CNOT4	99	87.226	Mandrillus_leucophaeus
ENSHCOG00000015815	cnot4a	100	98.148	ENSMAMG00000023194	cnot4a	100	90.947	Mastacembelus_armatus
ENSHCOG00000015815	cnot4a	100	98.148	ENSMZEG00005007312	cnot4a	99	92.222	Maylandia_zebra
ENSHCOG00000015815	cnot4a	100	69.250	ENSMGAG00000011788	CNOT4	100	68.758	Meleagris_gallopavo
ENSHCOG00000015815	cnot4a	91	89.434	ENSMAUG00000020415	Cnot4	98	89.434	Mesocricetus_auratus
ENSHCOG00000015815	cnot4a	92	87.226	ENSMICG00000001667	CNOT4	99	87.226	Microcebus_murinus
ENSHCOG00000015815	cnot4a	91	89.434	ENSMOCG00000020955	Cnot4	98	89.434	Microtus_ochrogaster
ENSHCOG00000015815	cnot4a	83	97.037	ENSMMOG00000014565	cnot4a	95	87.500	Mola_mola
ENSHCOG00000015815	cnot4a	91	89.434	ENSMODG00000014068	CNOT4	98	89.434	Monodelphis_domestica
ENSHCOG00000015815	cnot4a	93	97.407	ENSMALG00000011662	cnot4a	83	97.407	Monopterus_albus
ENSHCOG00000015815	cnot4a	91	89.434	MGP_CAROLIEiJ_G0028217	Cnot4	98	89.434	Mus_caroli
ENSHCOG00000015815	cnot4a	91	89.434	ENSMUSG00000038784	Cnot4	98	89.434	Mus_musculus
ENSHCOG00000015815	cnot4a	91	89.434	MGP_PahariEiJ_G0021974	Cnot4	98	89.434	Mus_pahari
ENSHCOG00000015815	cnot4a	91	89.434	MGP_SPRETEiJ_G0029216	Cnot4	98	89.434	Mus_spretus
ENSHCOG00000015815	cnot4a	91	89.434	ENSMPUG00000004089	CNOT4	98	89.434	Mustela_putorius_furo
ENSHCOG00000015815	cnot4a	93	73.264	ENSMLUG00000008260	CNOT4	99	87.226	Myotis_lucifugus
ENSHCOG00000015815	cnot4a	91	89.434	ENSNGAG00000015030	Cnot4	98	89.434	Nannospalax_galili
ENSHCOG00000015815	cnot4a	90	88.376	ENSNBRG00000021144	cnot4a	100	88.376	Neolamprologus_brichardi
ENSHCOG00000015815	cnot4a	92	86.861	ENSNLEG00000013352	CNOT4	99	86.861	Nomascus_leucogenys
ENSHCOG00000015815	cnot4a	84	66.667	ENSOPRG00000001023	CNOT4	81	66.667	Ochotona_princeps
ENSHCOG00000015815	cnot4a	91	89.434	ENSODEG00000012975	CNOT4	98	89.434	Octodon_degus
ENSHCOG00000015815	cnot4a	100	98.148	ENSONIG00000008656	cnot4a	92	98.148	Oreochromis_niloticus
ENSHCOG00000015815	cnot4a	91	89.434	ENSOANG00000005006	CNOT4	98	89.434	Ornithorhynchus_anatinus
ENSHCOG00000015815	cnot4a	91	89.434	ENSOCUG00000013448	CNOT4	98	89.434	Oryctolagus_cuniculus
ENSHCOG00000015815	cnot4a	100	96.296	ENSORLG00000003727	cnot4a	99	95.604	Oryzias_latipes
ENSHCOG00000015815	cnot4a	100	96.296	ENSORLG00020015684	cnot4a	99	95.604	Oryzias_latipes_hni
ENSHCOG00000015815	cnot4a	100	96.296	ENSORLG00015008470	cnot4a	99	95.604	Oryzias_latipes_hsok
ENSHCOG00000015815	cnot4a	100	96.667	ENSOMEG00000011084	cnot4a	99	95.971	Oryzias_melastigma
ENSHCOG00000015815	cnot4a	92	87.226	ENSOGAG00000015499	CNOT4	99	87.226	Otolemur_garnettii
ENSHCOG00000015815	cnot4a	92	87.226	ENSOARG00000008803	CNOT4	99	87.226	Ovis_aries
ENSHCOG00000015815	cnot4a	92	87.226	ENSPPAG00000041937	CNOT4	99	87.226	Pan_paniscus
ENSHCOG00000015815	cnot4a	92	87.226	ENSPPRG00000023940	CNOT4	99	87.226	Panthera_pardus
ENSHCOG00000015815	cnot4a	91	89.434	ENSPTIG00000016601	CNOT4	98	89.434	Panthera_tigris_altaica
ENSHCOG00000015815	cnot4a	92	87.226	ENSPTRG00000019727	CNOT4	99	87.226	Pan_troglodytes
ENSHCOG00000015815	cnot4a	92	87.226	ENSPANG00000017724	CNOT4	99	87.226	Papio_anubis
ENSHCOG00000015815	cnot4a	100	85.263	ENSPKIG00000018137	cnot4a	93	85.263	Paramormyrops_kingsleyae
ENSHCOG00000015815	cnot4a	100	69.127	ENSPSIG00000011256	CNOT4	100	68.881	Pelodiscus_sinensis
ENSHCOG00000015815	cnot4a	87	95.926	ENSPMGG00000005671	cnot4a	100	86.292	Periophthalmus_magnuspinnatus
ENSHCOG00000015815	cnot4a	91	89.434	ENSPEMG00000021566	Cnot4	98	89.434	Peromyscus_maniculatus_bairdii
ENSHCOG00000015815	cnot4a	91	89.434	ENSPCIG00000029622	CNOT4	94	89.434	Phascolarctos_cinereus
ENSHCOG00000015815	cnot4a	100	97.407	ENSPFOG00000002228	cnot4a	92	97.407	Poecilia_formosa
ENSHCOG00000015815	cnot4a	100	97.407	ENSPLAG00000001780	cnot4a	99	96.703	Poecilia_latipinna
ENSHCOG00000015815	cnot4a	100	97.407	ENSPMEG00000006852	cnot4a	99	96.703	Poecilia_mexicana
ENSHCOG00000015815	cnot4a	100	97.407	ENSPREG00000008171	cnot4a	99	94.245	Poecilia_reticulata
ENSHCOG00000015815	cnot4a	91	89.434	ENSPPYG00000018026	CNOT4	98	89.434	Pongo_abelii
ENSHCOG00000015815	cnot4a	92	87.226	ENSPCOG00000019907	CNOT4	99	87.226	Propithecus_coquereli
ENSHCOG00000015815	cnot4a	94	71.243	ENSPVAG00000004905	CNOT4	89	87.226	Pteropus_vampyrus
ENSHCOG00000015815	cnot4a	100	98.148	ENSPNYG00000004276	cnot4a	92	98.148	Pundamilia_nyererei
ENSHCOG00000015815	cnot4a	100	86.093	ENSPNAG00000020433	cnot4a	99	93.704	Pygocentrus_nattereri
ENSHCOG00000015815	cnot4a	100	91.513	ENSPNAG00000008679	cnot4b	99	91.481	Pygocentrus_nattereri
ENSHCOG00000015815	cnot4a	91	89.434	ENSRNOG00000010795	Cnot4	98	89.434	Rattus_norvegicus
ENSHCOG00000015815	cnot4a	92	87.226	ENSRBIG00000043977	CNOT4	99	87.226	Rhinopithecus_bieti
ENSHCOG00000015815	cnot4a	91	89.434	ENSSBOG00000020808	CNOT4	98	89.434	Saimiri_boliviensis_boliviensis
ENSHCOG00000015815	cnot4a	91	89.434	ENSSHAG00000013639	CNOT4	98	89.434	Sarcophilus_harrisii
ENSHCOG00000015815	cnot4a	97	75.223	ENSSFOG00015002019	cnot4a	96	90.370	Scleropages_formosus
ENSHCOG00000015815	cnot4a	100	74.289	ENSSFOG00015017285	CNOT4	92	89.964	Scleropages_formosus
ENSHCOG00000015815	cnot4a	100	98.148	ENSSMAG00000008614	cnot4a	99	98.155	Scophthalmus_maximus
ENSHCOG00000015815	cnot4a	82	92.105	ENSSDUG00000018585	cnot4b	98	92.105	Seriola_dumerili
ENSHCOG00000015815	cnot4a	100	98.148	ENSSDUG00000022635	cnot4a	99	98.148	Seriola_dumerili
ENSHCOG00000015815	cnot4a	100	66.667	ENSSLDG00000014347	cnot4b	100	60.996	Seriola_lalandi_dorsalis
ENSHCOG00000015815	cnot4a	100	98.148	ENSSLDG00000015770	cnot4a	100	92.081	Seriola_lalandi_dorsalis
ENSHCOG00000015815	cnot4a	85	87.226	ENSSPUG00000004677	CNOT4	99	87.226	Sphenodon_punctatus
ENSHCOG00000015815	cnot4a	100	98.148	ENSSPAG00000012329	cnot4a	99	98.148	Stegastes_partitus
ENSHCOG00000015815	cnot4a	92	87.226	ENSSSCG00000021354	CNOT4	99	87.226	Sus_scrofa
ENSHCOG00000015815	cnot4a	100	69.742	ENSTGUG00000009161	CNOT4	100	69.250	Taeniopygia_guttata
ENSHCOG00000015815	cnot4a	100	96.667	ENSTRUG00000016861	cnot4a	99	96.667	Takifugu_rubripes
ENSHCOG00000015815	cnot4a	100	83.243	ENSTNIG00000016000	cnot4a	98	90.037	Tetraodon_nigroviridis
ENSHCOG00000015815	cnot4a	86	82.847	ENSTBEG00000002202	CNOT4	87	81.752	Tupaia_belangeri
ENSHCOG00000015815	cnot4a	86	87.226	ENSTTRG00000005122	CNOT4	89	87.226	Tursiops_truncatus
ENSHCOG00000015815	cnot4a	85	87.226	ENSUAMG00000026759	CNOT4	99	87.226	Ursus_americanus
ENSHCOG00000015815	cnot4a	91	87.226	ENSUMAG00000015351	CNOT4	94	87.226	Ursus_maritimus
ENSHCOG00000015815	cnot4a	92	87.226	ENSVVUG00000006200	CNOT4	98	89.434	Vulpes_vulpes
ENSHCOG00000015815	cnot4a	92	88.148	ENSXETG00000010594	cnot4	89	88.148	Xenopus_tropicalis
ENSHCOG00000015815	cnot4a	80	96.337	ENSXCOG00000020824	cnot4a	97	96.337	Xiphophorus_couchianus
ENSHCOG00000015815	cnot4a	99	98.113	ENSXMAG00000016984	cnot4a	99	95.971	Xiphophorus_maculatus