EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000015834 (Gene tree)
Gene ID: 109511487
Gene Symbol: fip1l1b
Alias: fip1l1|wu:fd36f11|zgc:103421
Full Name: factor interacting with PAPOLA and CPSF1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 6179 bases
Position: chrKV880534.1:8844986-8851164
Accession: 109511487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000012753	Fip1	PF05182.13	1e-24	1	1
ENSHCOP00000012769	Fip1	PF05182.13	1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000019898	-	2593	XM_019862629	ENSHCOP00000012769	562 (aa)	XP_019718188	UPI00094F13E8
ENSHCOT00000019896	-	2539	-	ENSHCOP00000012753	544 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000015834's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015834's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015834	fip1l1b	70	88.542	ENSACIG00000001454	fip1l1b	96	88.542	Amphilophus_citrinellus
ENSHCOG00000015834	fip1l1b	99	84.314	ENSAOCG00000021043	fip1l1b	99	83.422	Amphiprion_ocellaris
ENSHCOG00000015834	fip1l1b	99	84.314	ENSAPEG00000022229	fip1l1b	99	83.422	Amphiprion_percula
ENSHCOG00000015834	fip1l1b	99	84.492	ENSATEG00000021757	fip1l1b	99	84.314	Anabas_testudineus
ENSHCOG00000015834	fip1l1b	83	57.418	ENSAPLG00000003042	-	90	58.767	Anas_platyrhynchos
ENSHCOG00000015834	fip1l1b	68	73.026	ENSACAG00000010556	-	89	57.411	Anolis_carolinensis
ENSHCOG00000015834	fip1l1b	99	83.750	ENSACLG00000010418	fip1l1b	99	84.464	Astatotilapia_calliptera
ENSHCOG00000015834	fip1l1b	57	69.419	ENSAMXG00000011126	fip1l1b	89	73.205	Astyanax_mexicanus
ENSHCOG00000015834	fip1l1b	59	44.720	ENSAMXG00000031045	fip1l1a	59	49.528	Astyanax_mexicanus
ENSHCOG00000015834	fip1l1b	83	63.341	ENSBTAG00000020653	FIP1L1	99	62.025	Bos_taurus
ENSHCOG00000015834	fip1l1b	83	60.331	ENSCHIG00000025903	-	99	59.722	Capra_hircus
ENSHCOG00000015834	fip1l1b	83	56.522	ENSCAPG00000009569	-	76	71.078	Cavia_aperea
ENSHCOG00000015834	fip1l1b	83	63.261	ENSCPOG00000010770	-	86	67.391	Cavia_porcellus
ENSHCOG00000015834	fip1l1b	55	49.686	ENSCPBG00000014849	-	52	50.168	Chrysemys_picta_bellii
ENSHCOG00000015834	fip1l1b	99	63.008	ENSCPBG00000025019	-	99	59.965	Chrysemys_picta_bellii
ENSHCOG00000015834	fip1l1b	86	58.656	ENSCGRG00001018568	Fip1l1	99	60.963	Cricetulus_griseus_chok1gshd
ENSHCOG00000015834	fip1l1b	86	58.656	ENSCGRG00000000208	Fip1l1	99	60.963	Cricetulus_griseus_crigri
ENSHCOG00000015834	fip1l1b	99	84.007	ENSCSEG00000006583	fip1l1b	99	82.721	Cynoglossus_semilaevis
ENSHCOG00000015834	fip1l1b	99	84.249	ENSCVAG00000023435	fip1l1b	99	82.051	Cyprinodon_variegatus
ENSHCOG00000015834	fip1l1b	99	68.430	ENSDARG00000070431	fip1l1b	99	67.406	Danio_rerio
ENSHCOG00000015834	fip1l1b	99	40.696	ENSDARG00000043328	fip1l1a	91	46.154	Danio_rerio
ENSHCOG00000015834	fip1l1b	80	50.699	ENSETEG00000018271	-	76	62.644	Echinops_telfairi
ENSHCOG00000015834	fip1l1b	70	54.608	ENSEASG00005019566	-	99	59.964	Equus_asinus_asinus
ENSHCOG00000015834	fip1l1b	99	51.537	ENSELUG00000004607	fip1l1a	99	53.748	Esox_lucius
ENSHCOG00000015834	fip1l1b	68	76.233	ENSELUG00000001280	fip1l1b	96	59.175	Esox_lucius
ENSHCOG00000015834	fip1l1b	99	82.491	ENSFHEG00000003843	fip1l1b	99	81.227	Fundulus_heteroclitus
ENSHCOG00000015834	fip1l1b	99	67.190	ENSGMOG00000004913	fip1l1b	99	67.016	Gadus_morhua
ENSHCOG00000015834	fip1l1b	61	35.342	ENSGMOG00000012065	-	58	38.356	Gadus_morhua
ENSHCOG00000015834	fip1l1b	99	62.523	ENSGALG00000013943	-	99	61.982	Gallus_gallus
ENSHCOG00000015834	fip1l1b	99	82.585	ENSGAFG00000008253	fip1l1b	99	81.508	Gambusia_affinis
ENSHCOG00000015834	fip1l1b	99	68.333	ENSGACG00000015946	fip1l1b	99	68.280	Gasterosteus_aculeatus
ENSHCOG00000015834	fip1l1b	99	63.115	ENSGAGG00000009763	-	99	59.758	Gopherus_agassizii
ENSHCOG00000015834	fip1l1b	55	47.531	ENSGAGG00000017677	-	83	44.807	Gopherus_agassizii
ENSHCOG00000015834	fip1l1b	99	83.750	ENSHBUG00000013978	fip1l1b	99	84.464	Haplochromis_burtoni
ENSHCOG00000015834	fip1l1b	97	59.633	ENSIPUG00000022454	fip1l1b	97	68.817	Ictalurus_punctatus
ENSHCOG00000015834	fip1l1b	99	81.136	ENSKMAG00000021938	fip1l1b	99	78.938	Kryptolebias_marmoratus
ENSHCOG00000015834	fip1l1b	99	80.927	ENSLBEG00000028819	fip1l1b	99	81.462	Labrus_bergylta
ENSHCOG00000015834	fip1l1b	95	62.004	ENSLACG00000011991	fip1l1a	96	62.991	Latimeria_chalumnae
ENSHCOG00000015834	fip1l1b	99	65.909	ENSLOCG00000014127	fip1l1b	99	66.608	Lepisosteus_oculatus
ENSHCOG00000015834	fip1l1b	99	84.007	ENSMAMG00000004535	fip1l1b	99	83.088	Mastacembelus_armatus
ENSHCOG00000015834	fip1l1b	99	84.464	ENSMZEG00005023828	fip1l1b	99	84.286	Maylandia_zebra
ENSHCOG00000015834	fip1l1b	86	54.728	ENSMAUG00000010526	Fip1l1	99	57.193	Mesocricetus_auratus
ENSHCOG00000015834	fip1l1b	86	54.981	ENSMOCG00000008020	Fip1l1	99	58.855	Microtus_ochrogaster
ENSHCOG00000015834	fip1l1b	86	74.661	ENSMMOG00000008262	fip1l1b	93	92.000	Mola_mola
ENSHCOG00000015834	fip1l1b	72	54.054	ENSMODG00000020654	-	85	53.291	Monodelphis_domestica
ENSHCOG00000015834	fip1l1b	99	64.748	ENSMALG00000000838	fip1l1b	93	70.588	Monopterus_albus
ENSHCOG00000015834	fip1l1b	69	64.691	MGP_CAROLIEiJ_G0027304	Fip1l1	99	60.357	Mus_caroli
ENSHCOG00000015834	fip1l1b	69	64.691	ENSMUSG00000029227	Fip1l1	99	60.357	Mus_musculus
ENSHCOG00000015834	fip1l1b	69	64.691	MGP_PahariEiJ_G0017085	Fip1l1	99	60.357	Mus_pahari
ENSHCOG00000015834	fip1l1b	69	64.691	MGP_SPRETEiJ_G0028299	Fip1l1	99	60.357	Mus_spretus
ENSHCOG00000015834	fip1l1b	69	65.544	ENSNGAG00000008849	Fip1l1	99	61.360	Nannospalax_galili
ENSHCOG00000015834	fip1l1b	99	83.750	ENSNBRG00000017832	fip1l1b	99	84.464	Neolamprologus_brichardi
ENSHCOG00000015834	fip1l1b	99	83.036	ENSONIG00000008785	fip1l1b	99	83.750	Oreochromis_niloticus
ENSHCOG00000015834	fip1l1b	83	52.562	ENSOANG00000003384	-	66	54.830	Ornithorhynchus_anatinus
ENSHCOG00000015834	fip1l1b	99	84.007	ENSORLG00000004397	fip1l1b	99	81.618	Oryzias_latipes
ENSHCOG00000015834	fip1l1b	99	84.007	ENSORLG00020008716	fip1l1b	99	81.801	Oryzias_latipes_hni
ENSHCOG00000015834	fip1l1b	99	84.007	ENSORLG00015006736	fip1l1b	99	81.801	Oryzias_latipes_hsok
ENSHCOG00000015834	fip1l1b	99	57.774	ENSOMEG00000015730	fip1l1b	97	82.320	Oryzias_melastigma
ENSHCOG00000015834	fip1l1b	99	62.610	ENSPKIG00000003396	fip1l1b	99	60.141	Paramormyrops_kingsleyae
ENSHCOG00000015834	fip1l1b	51	49.831	ENSPKIG00000014162	-	51	49.826	Paramormyrops_kingsleyae
ENSHCOG00000015834	fip1l1b	99	69.751	ENSPMGG00000017028	fip1l1b	99	67.558	Periophthalmus_magnuspinnatus
ENSHCOG00000015834	fip1l1b	86	58.418	ENSPEMG00000002025	Fip1l1	99	60.428	Peromyscus_maniculatus_bairdii
ENSHCOG00000015834	fip1l1b	99	82.342	ENSPFOG00000014745	fip1l1b	99	81.982	Poecilia_formosa
ENSHCOG00000015834	fip1l1b	99	80.216	ENSPLAG00000010954	fip1l1b	99	81.835	Poecilia_latipinna
ENSHCOG00000015834	fip1l1b	99	82.523	ENSPMEG00000019187	fip1l1b	99	82.162	Poecilia_mexicana
ENSHCOG00000015834	fip1l1b	82	66.814	ENSPREG00000012535	fip1l1b	90	62.766	Poecilia_reticulata
ENSHCOG00000015834	fip1l1b	67	85.979	ENSPNYG00000015976	fip1l1b	90	85.174	Pundamilia_nyererei
ENSHCOG00000015834	fip1l1b	58	68.502	ENSPNAG00000015341	fip1l1b	71	70.988	Pygocentrus_nattereri
ENSHCOG00000015834	fip1l1b	59	43.598	ENSPNAG00000009853	fip1l1a	60	51.643	Pygocentrus_nattereri
ENSHCOG00000015834	fip1l1b	97	39.012	ENSPNAG00000007456	-	55	44.262	Pygocentrus_nattereri
ENSHCOG00000015834	fip1l1b	70	59.653	ENSRNOG00000002275	Fip1l1	99	58.750	Rattus_norvegicus
ENSHCOG00000015834	fip1l1b	70	54.299	ENSSHAG00000015789	-	86	57.864	Sarcophilus_harrisii
ENSHCOG00000015834	fip1l1b	91	59.881	ENSSFOG00015017653	fip1l1b	99	59.443	Scleropages_formosus
ENSHCOG00000015834	fip1l1b	51	50.000	ENSSFOG00015010948	-	55	57.488	Scleropages_formosus
ENSHCOG00000015834	fip1l1b	99	84.875	ENSSMAG00000013444	fip1l1b	99	84.342	Scophthalmus_maximus
ENSHCOG00000015834	fip1l1b	99	85.383	ENSSDUG00000004117	fip1l1b	99	85.205	Seriola_dumerili
ENSHCOG00000015834	fip1l1b	99	84.848	ENSSLDG00000024099	fip1l1b	99	84.492	Seriola_lalandi_dorsalis
ENSHCOG00000015834	fip1l1b	57	55.906	ENSSARG00000001973	-	71	62.703	Sorex_araneus
ENSHCOG00000015834	fip1l1b	99	85.027	ENSSPAG00000017564	fip1l1b	99	84.135	Stegastes_partitus
ENSHCOG00000015834	fip1l1b	99	79.596	ENSTRUG00000001545	fip1l1b	99	78.428	Takifugu_rubripes
ENSHCOG00000015834	fip1l1b	99	74.037	ENSTNIG00000004104	fip1l1b	99	73.367	Tetraodon_nigroviridis
ENSHCOG00000015834	fip1l1b	68	57.353	ENSUMAG00000002758	-	91	61.429	Ursus_maritimus
ENSHCOG00000015834	fip1l1b	57	55.906	ENSVPAG00000011574	-	74	62.703	Vicugna_pacos
ENSHCOG00000015834	fip1l1b	83	62.955	ENSXETG00000011679	fip1l1	96	57.539	Xenopus_tropicalis
ENSHCOG00000015834	fip1l1b	99	64.534	ENSXCOG00000013656	fip1l1b	80	71.667	Xiphophorus_couchianus
ENSHCOG00000015834	fip1l1b	99	83.243	ENSXMAG00000017620	fip1l1b	99	81.261	Xiphophorus_maculatus