EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000015860 (Gene tree)
Gene ID: 109506961
Gene Symbol: ovol1a
Alias: ovol1|sb:cb956|zgc:171804
Full Name: putative transcription factor Ovo-like 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 5924 bases
Position: chrKV880472.1:687747-693670
Accession: 109506961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000012793	zf-C2H2	PF00096.26	4.7e-15	1	2
ENSHCOP00000012793	zf-C2H2	PF00096.26	4.7e-15	2	2
ENSHCOP00000012793	zf-met	PF12874.7	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027081	-	1864	XM_019856024	ENSHCOP00000012793	330 (aa)	XP_019711583	UPI00094EEDF6

Gene Model

Click here to download ENSHCOG00000015860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000015860	ovol1a	50	32.174	ENSHCOG00000015639	znf319b	65	32.174
ENSHCOG00000015860	ovol1a	51	44.737	ENSHCOG00000001252	-	94	44.737
ENSHCOG00000015860	ovol1a	73	41.772	ENSHCOG00000014881	-	61	41.772
ENSHCOG00000015860	ovol1a	50	37.179	ENSHCOG00000015414	-	64	37.179
ENSHCOG00000015860	ovol1a	53	33.333	ENSHCOG00000014796	-	56	33.333
ENSHCOG00000015860	ovol1a	64	38.961	ENSHCOG00000008133	-	59	38.961
ENSHCOG00000015860	ovol1a	59	35.965	ENSHCOG00000020924	-	56	35.965
ENSHCOG00000015860	ovol1a	77	31.776	ENSHCOG00000001318	-	89	31.776
ENSHCOG00000015860	ovol1a	50	43.750	ENSHCOG00000000947	-	67	43.750
ENSHCOG00000015860	ovol1a	53	37.179	ENSHCOG00000019001	-	59	37.179
ENSHCOG00000015860	ovol1a	55	37.349	ENSHCOG00000019555	GFI1	55	37.349
ENSHCOG00000015860	ovol1a	81	32.051	ENSHCOG00000010142	zbtb16a	51	32.051
ENSHCOG00000015860	ovol1a	50	34.783	ENSHCOG00000018201	-	72	34.783
ENSHCOG00000015860	ovol1a	51	35.345	ENSHCOG00000015231	-	51	35.345
ENSHCOG00000015860	ovol1a	62	36.709	ENSHCOG00000014713	-	74	37.349
ENSHCOG00000015860	ovol1a	51	34.667	ENSHCOG00000015241	-	63	32.948
ENSHCOG00000015860	ovol1a	64	38.462	ENSHCOG00000001942	-	86	37.255
ENSHCOG00000015860	ovol1a	53	38.750	ENSHCOG00000001338	-	70	40.260

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015860	ovol1a	98	41.284	ENSAMXG00000041879	ovol1b	98	41.284	Astyanax_mexicanus
ENSHCOG00000015860	ovol1a	99	57.849	ENSAMXG00000011046	ovol1a	99	59.366	Astyanax_mexicanus
ENSHCOG00000015860	ovol1a	99	58.621	ENSDARG00000076472	ovol1a	100	58.621	Danio_rerio
ENSHCOG00000015860	ovol1a	96	48.137	ENSDARG00000078256	ovol1b	99	48.137	Danio_rerio
ENSHCOG00000015860	ovol1a	99	59.605	ENSELUG00000000343	ovol1a	99	59.605	Esox_lucius
ENSHCOG00000015860	ovol1a	100	67.347	ENSFHEG00000002773	-	100	67.930	Fundulus_heteroclitus
ENSHCOG00000015860	ovol1a	100	55.357	ENSGACG00000018794	ovol1a	100	57.440	Gasterosteus_aculeatus
ENSHCOG00000015860	ovol1a	100	64.928	ENSKMAG00000002605	-	100	67.251	Kryptolebias_marmoratus
ENSHCOG00000015860	ovol1a	100	69.075	ENSMAMG00000009768	ovol1a	100	69.741	Mastacembelus_armatus
ENSHCOG00000015860	ovol1a	100	70.968	ENSMALG00000008421	ovol1a	100	70.968	Monopterus_albus
ENSHCOG00000015860	ovol1a	100	56.725	ENSPKIG00000024718	ovol1a	100	57.895	Paramormyrops_kingsleyae
ENSHCOG00000015860	ovol1a	100	66.087	ENSPFOG00000008841	-	100	66.087	Poecilia_formosa
ENSHCOG00000015860	ovol1a	90	43.581	ENSPNAG00000016198	ovol1b	80	60.123	Pygocentrus_nattereri
ENSHCOG00000015860	ovol1a	100	58.960	ENSPNAG00000020630	ovol1a	100	58.960	Pygocentrus_nattereri
ENSHCOG00000015860	ovol1a	100	67.797	ENSSDUG00000009846	ovol1a	100	68.644	Seriola_dumerili
ENSHCOG00000015860	ovol1a	67	54.955	ENSXCOG00000006461	-	78	54.955	Xiphophorus_couchianus