EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000015943 (Gene tree)
Gene ID: 109519996
Gene Symbol: rif1
Alias: fc38c03|si:dkey-89p3.2|wu:fc38c03
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 32921 bases
Position: chrKV880080.1:887125-920045
Accession: 109519996
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000012872	Rif1_N	PF12231.8	3.2e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000020030	-	8496	XM_019876913	ENSHCOP00000012872	2634 (aa)	XP_019732472	UPI00094E1682

Gene Model

Click here to download ENSHCOG00000015943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015943	rif1	60	48.177	ENSG00000080345	RIF1	98	52.086	Homo_sapiens
ENSHCOG00000015943	rif1	70	64.605	ENSAPOG00000011073	rif1	100	52.492	Acanthochromis_polyacanthus
ENSHCOG00000015943	rif1	60	49.171	ENSAMEG00000008461	RIF1	64	49.124	Ailuropoda_melanoleuca
ENSHCOG00000015943	rif1	83	68.764	ENSACIG00000017765	rif1	99	67.118	Amphilophus_citrinellus
ENSHCOG00000015943	rif1	90	63.188	ENSAOCG00000017231	rif1	94	64.970	Amphiprion_ocellaris
ENSHCOG00000015943	rif1	85	73.578	ENSAPEG00000013228	rif1	94	73.451	Amphiprion_percula
ENSHCOG00000015943	rif1	92	65.752	ENSATEG00000022887	rif1	99	65.556	Anabas_testudineus
ENSHCOG00000015943	rif1	58	51.356	ENSAPLG00000007092	RIF1	67	51.356	Anas_platyrhynchos
ENSHCOG00000015943	rif1	60	48.019	ENSACAG00000003714	RIF1	66	48.019	Anolis_carolinensis
ENSHCOG00000015943	rif1	59	49.042	ENSANAG00000024840	RIF1	63	49.362	Aotus_nancymaae
ENSHCOG00000015943	rif1	74	58.442	ENSAMXG00000010910	rif1	76	58.442	Astyanax_mexicanus
ENSHCOG00000015943	rif1	54	49.683	ENSBTAG00000021020	RIF1	61	49.502	Bos_taurus
ENSHCOG00000015943	rif1	59	49.120	ENSCJAG00000003138	RIF1	62	49.395	Callithrix_jacchus
ENSHCOG00000015943	rif1	62	48.576	ENSCAFG00000005670	RIF1	63	48.562	Canis_familiaris
ENSHCOG00000015943	rif1	62	48.722	ENSCAFG00020016401	RIF1	66	48.562	Canis_lupus_dingo
ENSHCOG00000015943	rif1	60	48.732	ENSCHIG00000020327	RIF1	63	48.761	Capra_hircus
ENSHCOG00000015943	rif1	60	46.105	ENSTSYG00000008861	RIF1	63	46.307	Carlito_syrichta
ENSHCOG00000015943	rif1	51	41.292	ENSCAPG00000008957	RIF1	68	41.292	Cavia_aperea
ENSHCOG00000015943	rif1	59	47.407	ENSCPOG00000037898	RIF1	65	46.797	Cavia_porcellus
ENSHCOG00000015943	rif1	59	46.918	ENSCCAG00000024760	RIF1	62	46.922	Cebus_capucinus
ENSHCOG00000015943	rif1	60	48.415	ENSCATG00000033353	RIF1	64	48.521	Cercocebus_atys
ENSHCOG00000015943	rif1	56	49.522	ENSCLAG00000001517	RIF1	62	49.262	Chinchilla_lanigera
ENSHCOG00000015943	rif1	60	48.732	ENSCSAG00000016089	RIF1	63	48.841	Chlorocebus_sabaeus
ENSHCOG00000015943	rif1	59	50.847	ENSCHOG00000007187	RIF1	61	50.847	Choloepus_hoffmanni
ENSHCOG00000015943	rif1	60	50.239	ENSCPBG00000025885	RIF1	70	50.080	Chrysemys_picta_bellii
ENSHCOG00000015943	rif1	55	55.263	ENSCANG00000028962	RIF1	62	55.263	Colobus_angolensis_palliatus
ENSHCOG00000015943	rif1	59	46.803	ENSCGRG00001024589	Rif1	64	47.649	Cricetulus_griseus_chok1gshd
ENSHCOG00000015943	rif1	59	48.148	ENSCGRG00000010713	Rif1	64	49.300	Cricetulus_griseus_crigri
ENSHCOG00000015943	rif1	87	61.648	ENSCSEG00000003945	rif1	99	62.178	Cynoglossus_semilaevis
ENSHCOG00000015943	rif1	72	60.229	ENSCVAG00000022479	rif1	97	60.813	Cyprinodon_variegatus
ENSHCOG00000015943	rif1	68	56.142	ENSDARG00000062650	rif1	75	55.857	Danio_rerio
ENSHCOG00000015943	rif1	59	47.008	ENSDNOG00000011194	RIF1	61	47.110	Dasypus_novemcinctus
ENSHCOG00000015943	rif1	56	54.032	ENSETEG00000012421	RIF1	60	54.032	Echinops_telfairi
ENSHCOG00000015943	rif1	60	48.585	ENSEASG00005023434	RIF1	51	67.213	Equus_asinus_asinus
ENSHCOG00000015943	rif1	56	57.466	ENSECAG00000012679	RIF1	61	57.466	Equus_caballus
ENSHCOG00000015943	rif1	65	61.862	ENSELUG00000006826	rif1	67	57.586	Esox_lucius
ENSHCOG00000015943	rif1	60	49.435	ENSFCAG00000029742	RIF1	63	49.435	Felis_catus
ENSHCOG00000015943	rif1	52	50.556	ENSFALG00000013874	RIF1	65	50.977	Ficedula_albicollis
ENSHCOG00000015943	rif1	60	48.916	ENSFDAG00000006538	RIF1	64	48.736	Fukomys_damarensis
ENSHCOG00000015943	rif1	91	61.825	ENSFHEG00000013721	rif1	99	61.769	Fundulus_heteroclitus
ENSHCOG00000015943	rif1	62	56.970	ENSGMOG00000003517	rif1	100	56.970	Gadus_morhua
ENSHCOG00000015943	rif1	53	50.134	ENSGALG00000012484	RIF1	65	50.583	Gallus_gallus
ENSHCOG00000015943	rif1	86	71.579	ENSGAFG00000017196	rif1	99	71.128	Gambusia_affinis
ENSHCOG00000015943	rif1	63	73.617	ENSGACG00000008579	rif1	77	63.084	Gasterosteus_aculeatus
ENSHCOG00000015943	rif1	60	49.560	ENSGAGG00000012595	RIF1	68	49.720	Gopherus_agassizii
ENSHCOG00000015943	rif1	51	56.392	ENSGGOG00000040178	RIF1	57	56.392	Gorilla_gorilla
ENSHCOG00000015943	rif1	66	78.884	ENSHBUG00000007125	rif1	99	65.752	Haplochromis_burtoni
ENSHCOG00000015943	rif1	54	49.767	ENSHGLG00100009807	RIF1	63	49.767	Heterocephalus_glaber_male
ENSHCOG00000015943	rif1	59	61.526	ENSIPUG00000021703	rif1	70	61.027	Ictalurus_punctatus
ENSHCOG00000015943	rif1	66	49.483	ENSSTOG00000020712	RIF1	69	49.562	Ictidomys_tridecemlineatus
ENSHCOG00000015943	rif1	60	47.649	ENSJJAG00000023000	Rif1	65	47.439	Jaculus_jaculus
ENSHCOG00000015943	rif1	73	61.654	ENSKMAG00000002852	rif1	80	62.883	Kryptolebias_marmoratus
ENSHCOG00000015943	rif1	57	65.313	ENSLBEG00000023196	rif1	57	66.099	Labrus_bergylta
ENSHCOG00000015943	rif1	62	53.712	ENSLACG00000005425	RIF1	69	53.633	Latimeria_chalumnae
ENSHCOG00000015943	rif1	68	52.874	ENSLOCG00000002657	rif1	81	53.448	Lepisosteus_oculatus
ENSHCOG00000015943	rif1	60	50.000	ENSLAFG00000009796	RIF1	64	49.960	Loxodonta_africana
ENSHCOG00000015943	rif1	60	48.576	ENSMFAG00000032233	RIF1	63	48.683	Macaca_fascicularis
ENSHCOG00000015943	rif1	60	48.576	ENSMMUG00000008611	RIF1	63	48.683	Macaca_mulatta
ENSHCOG00000015943	rif1	60	48.574	ENSMNEG00000031616	RIF1	63	48.681	Macaca_nemestrina
ENSHCOG00000015943	rif1	60	48.415	ENSMLEG00000042945	RIF1	63	48.521	Mandrillus_leucophaeus
ENSHCOG00000015943	rif1	75	61.996	ENSMAMG00000001745	rif1	82	62.878	Mastacembelus_armatus
ENSHCOG00000015943	rif1	84	67.900	ENSMZEG00005020920	rif1	97	67.760	Maylandia_zebra
ENSHCOG00000015943	rif1	57	50.626	ENSMGAG00000012732	RIF1	73	50.542	Meleagris_gallopavo
ENSHCOG00000015943	rif1	54	64.470	ENSMAUG00000013158	Rif1	62	62.810	Mesocricetus_auratus
ENSHCOG00000015943	rif1	60	49.446	ENSMICG00000046127	RIF1	63	49.800	Microcebus_murinus
ENSHCOG00000015943	rif1	60	46.915	ENSMOCG00000009381	Rif1	65	46.363	Microtus_ochrogaster
ENSHCOG00000015943	rif1	92	59.094	ENSMMOG00000006519	rif1	99	60.805	Mola_mola
ENSHCOG00000015943	rif1	60	49.840	ENSMODG00000003703	RIF1	65	49.721	Monodelphis_domestica
ENSHCOG00000015943	rif1	71	63.185	ENSMALG00000016759	rif1	87	63.185	Monopterus_albus
ENSHCOG00000015943	rif1	60	49.274	MGP_CAROLIEiJ_G0023555	Rif1	65	49.355	Mus_caroli
ENSHCOG00000015943	rif1	59	49.475	ENSMUSG00000036202	Rif1	64	49.358	Mus_musculus
ENSHCOG00000015943	rif1	60	45.345	MGP_PahariEiJ_G0025006	Rif1	64	46.865	Mus_pahari
ENSHCOG00000015943	rif1	59	49.959	MGP_SPRETEiJ_G0024476	Rif1	64	49.677	Mus_spretus
ENSHCOG00000015943	rif1	61	48.975	ENSMPUG00000000371	RIF1	64	48.817	Mustela_putorius_furo
ENSHCOG00000015943	rif1	50	45.817	ENSMLUG00000003376	RIF1	60	45.618	Myotis_lucifugus
ENSHCOG00000015943	rif1	62	49.048	ENSNGAG00000009268	Rif1	68	49.127	Nannospalax_galili
ENSHCOG00000015943	rif1	75	68.237	ENSNBRG00000014257	rif1	96	68.094	Neolamprologus_brichardi
ENSHCOG00000015943	rif1	60	47.840	ENSNLEG00000010955	RIF1	63	47.956	Nomascus_leucogenys
ENSHCOG00000015943	rif1	62	45.194	ENSODEG00000003950	RIF1	67	45.351	Octodon_degus
ENSHCOG00000015943	rif1	77	65.106	ENSONIG00000013657	rif1	100	65.623	Oreochromis_niloticus
ENSHCOG00000015943	rif1	50	52.273	ENSOANG00000006078	-	55	52.083	Ornithorhynchus_anatinus
ENSHCOG00000015943	rif1	60	47.871	ENSOCUG00000017435	RIF1	64	48.687	Oryctolagus_cuniculus
ENSHCOG00000015943	rif1	75	59.514	ENSORLG00020001302	rif1	84	59.379	Oryzias_latipes_hni
ENSHCOG00000015943	rif1	75	59.649	ENSORLG00015000009	rif1	83	59.447	Oryzias_latipes_hsok
ENSHCOG00000015943	rif1	68	63.557	ENSOMEG00000021513	rif1	77	63.557	Oryzias_melastigma
ENSHCOG00000015943	rif1	60	49.363	ENSOGAG00000006141	RIF1	63	49.478	Otolemur_garnettii
ENSHCOG00000015943	rif1	60	48.177	ENSPPAG00000023754	RIF1	63	48.177	Pan_paniscus
ENSHCOG00000015943	rif1	62	49.151	ENSPPRG00000003618	RIF1	65	49.232	Panthera_pardus
ENSHCOG00000015943	rif1	62	49.151	ENSPTIG00000020652	RIF1	65	49.232	Panthera_tigris_altaica
ENSHCOG00000015943	rif1	60	48.257	ENSPTRG00000012534	RIF1	63	48.257	Pan_troglodytes
ENSHCOG00000015943	rif1	60	48.415	ENSPANG00000008525	RIF1	63	48.521	Papio_anubis
ENSHCOG00000015943	rif1	69	55.620	ENSPKIG00000004267	rif1	79	55.620	Paramormyrops_kingsleyae
ENSHCOG00000015943	rif1	72	57.200	ENSPMGG00000016141	rif1	93	56.638	Periophthalmus_magnuspinnatus
ENSHCOG00000015943	rif1	60	48.606	ENSPEMG00000000446	Rif1	65	48.994	Peromyscus_maniculatus_bairdii
ENSHCOG00000015943	rif1	59	49.721	ENSPCIG00000009185	RIF1	65	49.601	Phascolarctos_cinereus
ENSHCOG00000015943	rif1	83	63.261	ENSPFOG00000000554	-	99	64.087	Poecilia_formosa
ENSHCOG00000015943	rif1	90	64.418	ENSPFOG00000017804	rif1	99	64.328	Poecilia_formosa
ENSHCOG00000015943	rif1	70	63.062	ENSPLAG00000017945	rif1	100	62.253	Poecilia_latipinna
ENSHCOG00000015943	rif1	80	62.569	ENSPMEG00000006897	-	99	62.292	Poecilia_mexicana
ENSHCOG00000015943	rif1	85	63.756	ENSPREG00000018052	rif1	99	63.666	Poecilia_reticulata
ENSHCOG00000015943	rif1	60	48.418	ENSPPYG00000012846	RIF1	64	48.524	Pongo_abelii
ENSHCOG00000015943	rif1	60	48.813	ENSPCOG00000027888	RIF1	63	49.162	Propithecus_coquereli
ENSHCOG00000015943	rif1	51	59.109	ENSPVAG00000014276	RIF1	57	59.109	Pteropus_vampyrus
ENSHCOG00000015943	rif1	84	64.840	ENSPNYG00000012940	rif1	97	64.702	Pundamilia_nyererei
ENSHCOG00000015943	rif1	65	58.127	ENSPNAG00000016685	rif1	77	55.556	Pygocentrus_nattereri
ENSHCOG00000015943	rif1	59	47.314	ENSRNOG00000054901	Rif1	65	46.994	Rattus_norvegicus
ENSHCOG00000015943	rif1	61	47.090	ENSRBIG00000003704	RIF1	65	47.243	Rhinopithecus_bieti
ENSHCOG00000015943	rif1	60	48.526	ENSRROG00000028206	RIF1	63	48.919	Rhinopithecus_roxellana
ENSHCOG00000015943	rif1	57	49.121	ENSSBOG00000029530	RIF1	62	49.121	Saimiri_boliviensis_boliviensis
ENSHCOG00000015943	rif1	59	49.519	ENSSHAG00000018552	RIF1	65	49.279	Sarcophilus_harrisii
ENSHCOG00000015943	rif1	61	60.127	ENSSFOG00015021539	rif1	72	59.748	Scleropages_formosus
ENSHCOG00000015943	rif1	71	64.809	ENSSMAG00000011704	rif1	74	65.003	Scophthalmus_maximus
ENSHCOG00000015943	rif1	86	67.093	ENSSDUG00000015632	rif1	99	66.958	Seriola_dumerili
ENSHCOG00000015943	rif1	91	67.834	ENSSLDG00000019531	rif1	99	66.969	Seriola_lalandi_dorsalis
ENSHCOG00000015943	rif1	58	50.496	ENSSPUG00000003062	RIF1	66	50.537	Sphenodon_punctatus
ENSHCOG00000015943	rif1	58	69.364	ENSSPAG00000018359	rif1	96	68.979	Stegastes_partitus
ENSHCOG00000015943	rif1	60	49.879	ENSSSCG00000016395	RIF1	63	50.040	Sus_scrofa
ENSHCOG00000015943	rif1	71	62.623	ENSTRUG00000015808	rif1	99	61.405	Takifugu_rubripes
ENSHCOG00000015943	rif1	70	61.561	ENSTNIG00000011538	rif1	79	61.561	Tetraodon_nigroviridis
ENSHCOG00000015943	rif1	54	52.113	ENSTBEG00000016082	RIF1	60	42.653	Tupaia_belangeri
ENSHCOG00000015943	rif1	60	49.244	ENSTTRG00000011190	RIF1	64	48.856	Tursiops_truncatus
ENSHCOG00000015943	rif1	51	45.980	ENSUAMG00000026385	RIF1	59	46.123	Ursus_americanus
ENSHCOG00000015943	rif1	60	48.485	ENSUMAG00000000337	RIF1	63	48.521	Ursus_maritimus
ENSHCOG00000015943	rif1	62	47.887	ENSVPAG00000002162	RIF1	66	47.731	Vicugna_pacos
ENSHCOG00000015943	rif1	61	48.578	ENSVVUG00000011293	RIF1	65	48.420	Vulpes_vulpes
ENSHCOG00000015943	rif1	59	48.169	ENSXETG00000004530	rif1	65	48.335	Xenopus_tropicalis
ENSHCOG00000015943	rif1	87	58.978	ENSXMAG00000000506	rif1	99	58.885	Xiphophorus_maculatus