EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000015951 (Gene tree)
Gene ID: 109522758
Gene Symbol: larp4aa
Alias: larp4a|si:ch211-156j22.2
Full Name: la-related protein 4-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 34056 bases
Position: chrKV880154.1:88977-123032
Accession: 109522758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000025647	La	PF05383.17	3.3e-17	1	1
ENSHCOP00000012875	La	PF05383.17	3.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000020033	-	4449	XM_019881540	ENSHCOP00000012875	792 (aa)	XP_019737099	UPI00094EED15
ENSHCOT00000020028	-	4407	XM_019881541	ENSHCOP00000025647	778 (aa)	XP_019737100	UPI00094EDBB1

Gene Model

Click here to download ENSHCOG00000015951's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015951's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000015951	larp4aa	95	46.606	ENSHCOG00000020857	larp4ab	100	46.405
ENSHCOG00000015951	larp4aa	52	44.622	ENSHCOG00000011581	LARP4B	60	44.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015951	larp4aa	89	56.014	ENSG00000161813	LARP4	99	59.925	Homo_sapiens
ENSHCOG00000015951	larp4aa	100	77.916	ENSAPOG00000007142	larp4aa	100	77.792	Acanthochromis_polyacanthus
ENSHCOG00000015951	larp4aa	95	50.525	ENSAPOG00000021331	larp4ab	100	49.870	Acanthochromis_polyacanthus
ENSHCOG00000015951	larp4aa	95	48.244	ENSAMEG00000001275	LARP4	99	48.244	Ailuropoda_melanoleuca
ENSHCOG00000015951	larp4aa	100	73.048	ENSACIG00000001198	larp4aa	85	89.542	Amphilophus_citrinellus
ENSHCOG00000015951	larp4aa	100	78.342	ENSAOCG00000002408	larp4aa	100	77.970	Amphiprion_ocellaris
ENSHCOG00000015951	larp4aa	95	49.542	ENSAOCG00000006387	larp4ab	100	48.711	Amphiprion_ocellaris
ENSHCOG00000015951	larp4aa	100	78.218	ENSAPEG00000019058	larp4aa	100	77.847	Amphiprion_percula
ENSHCOG00000015951	larp4aa	95	49.290	ENSATEG00000001018	larp4ab	100	49.418	Anabas_testudineus
ENSHCOG00000015951	larp4aa	100	75.879	ENSATEG00000020715	larp4aa	100	75.503	Anabas_testudineus
ENSHCOG00000015951	larp4aa	95	49.678	ENSAPLG00000013661	LARP4	99	49.936	Anas_platyrhynchos
ENSHCOG00000015951	larp4aa	95	49.676	ENSACAG00000017133	LARP4	96	49.935	Anolis_carolinensis
ENSHCOG00000015951	larp4aa	86	59.630	ENSANAG00000029342	LARP4	99	59.630	Aotus_nancymaae
ENSHCOG00000015951	larp4aa	100	74.785	ENSACLG00000002575	larp4aa	100	74.785	Astatotilapia_calliptera
ENSHCOG00000015951	larp4aa	100	61.622	ENSAMXG00000036493	larp4aa	100	61.779	Astyanax_mexicanus
ENSHCOG00000015951	larp4aa	100	50.367	ENSAMXG00000001515	larp4ab	100	51.578	Astyanax_mexicanus
ENSHCOG00000015951	larp4aa	95	48.524	ENSBTAG00000017164	LARP4	99	47.943	Bos_taurus
ENSHCOG00000015951	larp4aa	89	57.143	ENSCJAG00000021131	LARP4	99	60.000	Callithrix_jacchus
ENSHCOG00000015951	larp4aa	82	60.904	ENSCAFG00020014554	LARP4	99	58.020	Canis_lupus_dingo
ENSHCOG00000015951	larp4aa	95	48.148	ENSCHIG00000025965	LARP4	99	47.570	Capra_hircus
ENSHCOG00000015951	larp4aa	95	51.434	ENSTSYG00000004342	LARP4	96	61.867	Carlito_syrichta
ENSHCOG00000015951	larp4aa	94	38.992	ENSCAPG00000012942	LARP4	100	38.727	Cavia_aperea
ENSHCOG00000015951	larp4aa	95	45.785	ENSCPOG00000020519	LARP4	99	45.655	Cavia_porcellus
ENSHCOG00000015951	larp4aa	86	59.925	ENSCCAG00000024439	LARP4	99	59.259	Cebus_capucinus
ENSHCOG00000015951	larp4aa	95	47.074	ENSCATG00000044528	LARP4	99	46.382	Cercocebus_atys
ENSHCOG00000015951	larp4aa	95	48.765	ENSCLAG00000001829	LARP4	99	48.635	Chinchilla_lanigera
ENSHCOG00000015951	larp4aa	95	49.936	ENSCPBG00000019407	LARP4	90	50.064	Chrysemys_picta_bellii
ENSHCOG00000015951	larp4aa	95	44.189	ENSCANG00000033097	-	86	60.714	Colobus_angolensis_palliatus
ENSHCOG00000015951	larp4aa	89	58.042	ENSCANG00000029159	-	99	61.049	Colobus_angolensis_palliatus
ENSHCOG00000015951	larp4aa	95	49.285	ENSCGRG00001010818	Larp4	99	49.476	Cricetulus_griseus_chok1gshd
ENSHCOG00000015951	larp4aa	95	49.285	ENSCGRG00000009382	Larp4	100	49.476	Cricetulus_griseus_crigri
ENSHCOG00000015951	larp4aa	90	46.225	ENSCSEG00000003240	larp4ab	98	47.074	Cynoglossus_semilaevis
ENSHCOG00000015951	larp4aa	100	74.265	ENSCSEG00000001963	larp4aa	100	74.265	Cynoglossus_semilaevis
ENSHCOG00000015951	larp4aa	100	74.662	ENSCVAG00000005488	larp4aa	100	74.785	Cyprinodon_variegatus
ENSHCOG00000015951	larp4aa	95	50.585	ENSDARG00000074979	larp4ab	87	75.974	Danio_rerio
ENSHCOG00000015951	larp4aa	100	62.562	ENSDARG00000078401	larp4aa	100	63.300	Danio_rerio
ENSHCOG00000015951	larp4aa	95	46.907	ENSDORG00000004013	Larp4	99	47.036	Dipodomys_ordii
ENSHCOG00000015951	larp4aa	69	53.333	ENSETEG00000011683	LARP4	72	53.333	Echinops_telfairi
ENSHCOG00000015951	larp4aa	52	44.316	ENSEBUG00000010394	LARP4	85	39.177	Eptatretus_burgeri
ENSHCOG00000015951	larp4aa	95	46.814	ENSEASG00005004356	LARP4	100	56.780	Equus_asinus_asinus
ENSHCOG00000015951	larp4aa	95	48.895	ENSECAG00000012479	LARP4	100	48.736	Equus_caballus
ENSHCOG00000015951	larp4aa	69	82.051	ENSEEUG00000000316	LARP4	69	82.051	Erinaceus_europaeus
ENSHCOG00000015951	larp4aa	95	51.558	ENSELUG00000018650	larp4ab	85	80.435	Esox_lucius
ENSHCOG00000015951	larp4aa	100	60.662	ENSELUG00000000395	larp4aa	100	60.465	Esox_lucius
ENSHCOG00000015951	larp4aa	83	62.500	ENSFCAG00000031897	LARP4	96	62.599	Felis_catus
ENSHCOG00000015951	larp4aa	80	50.383	ENSFALG00000002114	LARP4	95	50.840	Ficedula_albicollis
ENSHCOG00000015951	larp4aa	95	48.249	ENSFDAG00000006406	-	99	48.450	Fukomys_damarensis
ENSHCOG00000015951	larp4aa	95	46.936	ENSFHEG00000013854	larp4ab	99	46.104	Fundulus_heteroclitus
ENSHCOG00000015951	larp4aa	100	73.626	ENSFHEG00000004338	larp4aa	100	73.227	Fundulus_heteroclitus
ENSHCOG00000015951	larp4aa	100	68.608	ENSGMOG00000008246	larp4aa	100	67.848	Gadus_morhua
ENSHCOG00000015951	larp4aa	90	49.452	ENSGALG00000042122	LARP4	92	49.726	Gallus_gallus
ENSHCOG00000015951	larp4aa	95	48.659	ENSGAFG00000021777	larp4ab	99	48.276	Gambusia_affinis
ENSHCOG00000015951	larp4aa	95	48.790	ENSGACG00000000680	larp4ab	96	52.518	Gasterosteus_aculeatus
ENSHCOG00000015951	larp4aa	100	73.897	ENSGACG00000008381	larp4aa	98	85.359	Gasterosteus_aculeatus
ENSHCOG00000015951	larp4aa	95	50.065	ENSGAGG00000006969	LARP4	99	50.129	Gopherus_agassizii
ENSHCOG00000015951	larp4aa	86	59.551	ENSGGOG00000015230	LARP4	99	59.551	Gorilla_gorilla
ENSHCOG00000015951	larp4aa	100	74.662	ENSHBUG00000023074	larp4aa	100	74.662	Haplochromis_burtoni
ENSHCOG00000015951	larp4aa	84	50.297	ENSHGLG00000005513	-	96	50.297	Heterocephalus_glaber_female
ENSHCOG00000015951	larp4aa	80	49.767	ENSHGLG00000013875	-	96	48.678	Heterocephalus_glaber_female
ENSHCOG00000015951	larp4aa	95	47.854	ENSHGLG00100011678	-	99	47.204	Heterocephalus_glaber_male
ENSHCOG00000015951	larp4aa	95	48.765	ENSHGLG00100016984	-	99	48.895	Heterocephalus_glaber_male
ENSHCOG00000015951	larp4aa	100	61.369	ENSIPUG00000007514	larp4aa	100	60.854	Ictalurus_punctatus
ENSHCOG00000015951	larp4aa	95	49.204	ENSIPUG00000021659	larp4ab	99	48.541	Ictalurus_punctatus
ENSHCOG00000015951	larp4aa	95	48.964	ENSSTOG00000003553	LARP4	99	48.249	Ictidomys_tridecemlineatus
ENSHCOG00000015951	larp4aa	100	75.093	ENSKMAG00000006800	larp4aa	100	75.217	Kryptolebias_marmoratus
ENSHCOG00000015951	larp4aa	95	49.422	ENSKMAG00000018556	larp4ab	100	48.843	Kryptolebias_marmoratus
ENSHCOG00000015951	larp4aa	97	75.776	ENSLBEG00000014537	larp4aa	100	75.447	Labrus_bergylta
ENSHCOG00000015951	larp4aa	95	48.579	ENSLBEG00000019306	larp4ab	100	48.645	Labrus_bergylta
ENSHCOG00000015951	larp4aa	96	51.432	ENSLACG00000019090	LARP4	99	50.625	Latimeria_chalumnae
ENSHCOG00000015951	larp4aa	100	60.497	ENSLOCG00000007113	larp4ab	100	60.373	Lepisosteus_oculatus
ENSHCOG00000015951	larp4aa	95	47.490	ENSLAFG00000005160	LARP4	100	46.832	Loxodonta_africana
ENSHCOG00000015951	larp4aa	83	62.334	ENSMFAG00000043681	LARP4	96	61.828	Macaca_fascicularis
ENSHCOG00000015951	larp4aa	83	62.334	ENSMMUG00000008172	LARP4	96	61.828	Macaca_mulatta
ENSHCOG00000015951	larp4aa	90	47.790	ENSMNEG00000034602	LARP4	96	47.260	Macaca_nemestrina
ENSHCOG00000015951	larp4aa	77	53.254	ENSMNEG00000037799	-	93	53.254	Macaca_nemestrina
ENSHCOG00000015951	larp4aa	89	56.993	ENSMLEG00000039661	LARP4	99	59.925	Mandrillus_leucophaeus
ENSHCOG00000015951	larp4aa	95	50.387	ENSMAMG00000002616	larp4ab	100	50.904	Mastacembelus_armatus
ENSHCOG00000015951	larp4aa	100	77.065	ENSMAMG00000011206	larp4aa	100	76.695	Mastacembelus_armatus
ENSHCOG00000015951	larp4aa	100	75.031	ENSMZEG00005001813	larp4aa	100	74.908	Maylandia_zebra
ENSHCOG00000015951	larp4aa	90	49.254	ENSMGAG00000010598	LARP4	92	49.795	Meleagris_gallopavo
ENSHCOG00000015951	larp4aa	80	62.640	ENSMICG00000030156	-	90	59.799	Microcebus_murinus
ENSHCOG00000015951	larp4aa	73	82.692	ENSMICG00000012388	-	97	82.692	Microcebus_murinus
ENSHCOG00000015951	larp4aa	95	48.177	ENSMOCG00000020635	Larp4	52	62.797	Microtus_ochrogaster
ENSHCOG00000015951	larp4aa	100	71.836	ENSMMOG00000004785	larp4aa	100	71.340	Mola_mola
ENSHCOG00000015951	larp4aa	95	47.368	ENSMMOG00000021861	larp4ab	92	56.091	Mola_mola
ENSHCOG00000015951	larp4aa	67	63.580	MGP_CAROLIEiJ_G0020281	Larp4	83	63.333	Mus_caroli
ENSHCOG00000015951	larp4aa	95	48.825	ENSMUSG00000023025	Larp4	100	48.319	Mus_musculus
ENSHCOG00000015951	larp4aa	95	48.956	MGP_PahariEiJ_G0020284	Larp4	99	48.497	Mus_pahari
ENSHCOG00000015951	larp4aa	95	47.984	ENSMPUG00000008706	LARP4	96	47.854	Mustela_putorius_furo
ENSHCOG00000015951	larp4aa	95	47.984	ENSMLUG00000012513	-	99	47.416	Myotis_lucifugus
ENSHCOG00000015951	larp4aa	100	74.908	ENSNBRG00000011292	larp4aa	100	74.539	Neolamprologus_brichardi
ENSHCOG00000015951	larp4aa	86	60.300	ENSNLEG00000017798	LARP4	99	60.300	Nomascus_leucogenys
ENSHCOG00000015951	larp4aa	95	47.984	ENSODEG00000009770	LARP4	100	47.724	Octodon_degus
ENSHCOG00000015951	larp4aa	100	74.874	ENSONIG00000011895	larp4aa	100	75.472	Oreochromis_niloticus
ENSHCOG00000015951	larp4aa	95	46.521	ENSONIG00000019124	larp4ab	99	47.097	Oreochromis_niloticus
ENSHCOG00000015951	larp4aa	65	55.535	ENSOANG00000004373	LARP4	92	55.056	Ornithorhynchus_anatinus
ENSHCOG00000015951	larp4aa	95	47.911	ENSOCUG00000021417	-	52	60.574	Oryctolagus_cuniculus
ENSHCOG00000015951	larp4aa	95	48.249	ENSOCUG00000026872	-	99	47.613	Oryctolagus_cuniculus
ENSHCOG00000015951	larp4aa	100	70.880	ENSORLG00000006758	larp4aa	100	70.559	Oryzias_latipes
ENSHCOG00000015951	larp4aa	100	70.632	ENSORLG00020010258	larp4aa	100	70.632	Oryzias_latipes_hni
ENSHCOG00000015951	larp4aa	100	70.260	ENSORLG00015002292	larp4aa	100	70.186	Oryzias_latipes_hsok
ENSHCOG00000015951	larp4aa	100	69.365	ENSOMEG00000019749	larp4aa	96	80.226	Oryzias_melastigma
ENSHCOG00000015951	larp4aa	65	53.484	ENSOGAG00000001415	LARP4	99	52.642	Otolemur_garnettii
ENSHCOG00000015951	larp4aa	95	48.395	ENSOARG00000017702	LARP4	99	47.815	Ovis_aries
ENSHCOG00000015951	larp4aa	76	53.829	ENSPPAG00000035100	LARP4	86	60.904	Pan_paniscus
ENSHCOG00000015951	larp4aa	83	62.500	ENSPPRG00000004522	LARP4	96	62.599	Panthera_pardus
ENSHCOG00000015951	larp4aa	83	62.500	ENSPTIG00000015617	LARP4	96	62.599	Panthera_tigris_altaica
ENSHCOG00000015951	larp4aa	89	55.670	ENSPTRG00000004935	LARP4	99	59.551	Pan_troglodytes
ENSHCOG00000015951	larp4aa	86	60.674	ENSPANG00000022964	LARP4	99	60.674	Papio_anubis
ENSHCOG00000015951	larp4aa	100	58.213	ENSPKIG00000005950	larp4ab	100	57.488	Paramormyrops_kingsleyae
ENSHCOG00000015951	larp4aa	95	48.298	ENSPSIG00000015867	LARP4	99	48.734	Pelodiscus_sinensis
ENSHCOG00000015951	larp4aa	52	55.731	ENSPMAG00000002788	LARP4	78	55.859	Petromyzon_marinus
ENSHCOG00000015951	larp4aa	96	48.849	ENSPCIG00000000384	LARP4	99	49.159	Phascolarctos_cinereus
ENSHCOG00000015951	larp4aa	95	48.688	ENSPFOG00000009764	larp4ab	99	46.899	Poecilia_formosa
ENSHCOG00000015951	larp4aa	100	75.679	ENSPFOG00000013148	larp4aa	99	81.633	Poecilia_formosa
ENSHCOG00000015951	larp4aa	100	75.251	ENSPLAG00000013626	larp4aa	100	75.377	Poecilia_latipinna
ENSHCOG00000015951	larp4aa	95	48.244	ENSPLAG00000008502	larp4ab	99	46.803	Poecilia_latipinna
ENSHCOG00000015951	larp4aa	100	75.432	ENSPMEG00000014271	larp4aa	100	75.556	Poecilia_mexicana
ENSHCOG00000015951	larp4aa	95	48.568	ENSPMEG00000002720	larp4ab	99	47.656	Poecilia_mexicana
ENSHCOG00000015951	larp4aa	100	75.346	ENSPREG00000022597	larp4aa	100	75.472	Poecilia_reticulata
ENSHCOG00000015951	larp4aa	65	55.000	ENSPPYG00000004512	-	99	54.264	Pongo_abelii
ENSHCOG00000015951	larp4aa	77	65.411	ENSPCAG00000003671	LARP4	80	65.411	Procavia_capensis
ENSHCOG00000015951	larp4aa	83	62.534	ENSPCOG00000026291	LARP4	96	62.234	Propithecus_coquereli
ENSHCOG00000015951	larp4aa	100	74.785	ENSPNYG00000022265	larp4aa	100	74.785	Pundamilia_nyererei
ENSHCOG00000015951	larp4aa	96	61.509	ENSPNAG00000024770	larp4aa	99	61.616	Pygocentrus_nattereri
ENSHCOG00000015951	larp4aa	95	52.739	ENSPNAG00000014478	larp4ab	99	52.124	Pygocentrus_nattereri
ENSHCOG00000015951	larp4aa	90	49.301	ENSRBIG00000036890	-	99	50.769	Rhinopithecus_bieti
ENSHCOG00000015951	larp4aa	86	59.925	ENSRBIG00000038857	-	99	59.925	Rhinopithecus_bieti
ENSHCOG00000015951	larp4aa	95	44.850	ENSRROG00000025487	-	99	50.769	Rhinopithecus_roxellana
ENSHCOG00000015951	larp4aa	83	62.334	ENSRROG00000042764	-	99	59.925	Rhinopithecus_roxellana
ENSHCOG00000015951	larp4aa	83	61.273	ENSSBOG00000026650	LARP4	99	59.341	Saimiri_boliviensis_boliviensis
ENSHCOG00000015951	larp4aa	100	59.113	ENSSFOG00015014096	larp4ab	100	60.222	Scleropages_formosus
ENSHCOG00000015951	larp4aa	99	60.387	ENSSFOG00015003868	larp4aa	99	61.089	Scleropages_formosus
ENSHCOG00000015951	larp4aa	100	75.679	ENSSMAG00000019473	larp4aa	100	75.990	Scophthalmus_maximus
ENSHCOG00000015951	larp4aa	95	49.496	ENSSMAG00000002838	larp4ab	100	49.810	Scophthalmus_maximus
ENSHCOG00000015951	larp4aa	95	50.127	ENSSDUG00000006655	larp4ab	100	49.496	Seriola_dumerili
ENSHCOG00000015951	larp4aa	100	77.435	ENSSDUG00000010621	larp4aa	100	77.435	Seriola_dumerili
ENSHCOG00000015951	larp4aa	100	77.435	ENSSLDG00000004942	larp4aa	100	77.065	Seriola_lalandi_dorsalis
ENSHCOG00000015951	larp4aa	95	51.088	ENSSLDG00000001791	larp4ab	100	51.097	Seriola_lalandi_dorsalis
ENSHCOG00000015951	larp4aa	64	61.183	ENSSARG00000012469	LARP4	92	52.007	Sorex_araneus
ENSHCOG00000015951	larp4aa	90	48.784	ENSSPUG00000016552	LARP4	93	49.662	Sphenodon_punctatus
ENSHCOG00000015951	larp4aa	95	50.329	ENSSPAG00000002172	larp4ab	100	49.542	Stegastes_partitus
ENSHCOG00000015951	larp4aa	92	80.261	ENSSPAG00000007222	larp4aa	98	78.056	Stegastes_partitus
ENSHCOG00000015951	larp4aa	95	47.876	ENSSSCG00000028516	LARP4	100	47.759	Sus_scrofa
ENSHCOG00000015951	larp4aa	95	48.906	ENSTGUG00000003479	LARP4	99	48.914	Taeniopygia_guttata
ENSHCOG00000015951	larp4aa	95	47.416	ENSTRUG00000007206	larp4ab	100	46.641	Takifugu_rubripes
ENSHCOG00000015951	larp4aa	95	45.006	ENSTNIG00000014571	larp4ab	100	45.111	Tetraodon_nigroviridis
ENSHCOG00000015951	larp4aa	95	71.028	ENSTNIG00000015109	larp4aa	99	70.415	Tetraodon_nigroviridis
ENSHCOG00000015951	larp4aa	80	53.333	ENSTBEG00000005167	LARP4	82	53.333	Tupaia_belangeri
ENSHCOG00000015951	larp4aa	95	47.792	ENSTTRG00000003764	LARP4	99	47.097	Tursiops_truncatus
ENSHCOG00000015951	larp4aa	66	54.869	ENSUAMG00000013764	LARP4	98	54.597	Ursus_americanus
ENSHCOG00000015951	larp4aa	95	48.375	ENSUMAG00000008473	LARP4	99	48.375	Ursus_maritimus
ENSHCOG00000015951	larp4aa	95	48.010	ENSVPAG00000010136	LARP4	99	47.194	Vicugna_pacos
ENSHCOG00000015951	larp4aa	84	61.579	ENSVVUG00000024717	LARP4	99	57.143	Vulpes_vulpes
ENSHCOG00000015951	larp4aa	87	47.983	ENSXETG00000007283	larp4	95	49.928	Xenopus_tropicalis
ENSHCOG00000015951	larp4aa	100	71.588	ENSXCOG00000006387	larp4aa	100	71.712	Xiphophorus_couchianus
ENSHCOG00000015951	larp4aa	100	75.495	ENSXMAG00000010519	larp4aa	100	75.619	Xiphophorus_maculatus
ENSHCOG00000015951	larp4aa	95	48.774	ENSXMAG00000002156	larp4ab	99	48.635	Xiphophorus_maculatus