EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000016006 (Gene tree)
Gene ID: 109527274
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 23135 bases
Position: chrKV880294.1:2261088-2284222
Accession: 109527274
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000025682	Suf	PF05843.14	1.7e-07	1	1
ENSHCOP00000025682	S1	PF00575.23	2.9e-58	1	4
ENSHCOP00000025682	S1	PF00575.23	2.9e-58	2	4
ENSHCOP00000025682	S1	PF00575.23	2.9e-58	3	4
ENSHCOP00000025682	S1	PF00575.23	2.9e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000020101	-	7469	XM_019889076	ENSHCOP00000025682	1811 (aa)	XP_019744635	UPI00094F378B

Gene Model

Click here to download ENSHCOG00000016006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000016006's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000016006	pdcd11	99	43.228	ENSG00000148843	PDCD11	99	42.910	Homo_sapiens
ENSHCOG00000016006	pdcd11	100	71.868	ENSAPOG00000015629	pdcd11	100	71.813	Acanthochromis_polyacanthus
ENSHCOG00000016006	pdcd11	99	43.203	ENSAMEG00000017935	PDCD11	99	43.068	Ailuropoda_melanoleuca
ENSHCOG00000016006	pdcd11	50	62.595	ENSACIG00000006458	-	98	62.486	Amphilophus_citrinellus
ENSHCOG00000016006	pdcd11	100	72.292	ENSAOCG00000015287	pdcd11	100	72.292	Amphiprion_ocellaris
ENSHCOG00000016006	pdcd11	54	69.534	ENSAPEG00000020240	pdcd11	97	69.433	Amphiprion_percula
ENSHCOG00000016006	pdcd11	99	72.692	ENSATEG00000021043	pdcd11	99	72.802	Anabas_testudineus
ENSHCOG00000016006	pdcd11	99	43.660	ENSAPLG00000010301	PDCD11	96	58.201	Anas_platyrhynchos
ENSHCOG00000016006	pdcd11	99	43.119	ENSACAG00000004796	PDCD11	99	43.167	Anolis_carolinensis
ENSHCOG00000016006	pdcd11	99	42.925	ENSANAG00000034576	PDCD11	99	42.872	Aotus_nancymaae
ENSHCOG00000016006	pdcd11	95	84.667	ENSACLG00000018236	pdcd11	99	79.023	Astatotilapia_calliptera
ENSHCOG00000016006	pdcd11	99	46.806	ENSAMXG00000005458	pdcd11	97	50.518	Astyanax_mexicanus
ENSHCOG00000016006	pdcd11	99	42.744	ENSCJAG00000018257	PDCD11	99	42.736	Callithrix_jacchus
ENSHCOG00000016006	pdcd11	99	43.189	ENSCAFG00000010411	PDCD11	99	43.333	Canis_familiaris
ENSHCOG00000016006	pdcd11	99	43.955	ENSCAFG00020010369	PDCD11	99	43.938	Canis_lupus_dingo
ENSHCOG00000016006	pdcd11	96	41.736	ENSTSYG00000033423	PDCD11	98	41.625	Carlito_syrichta
ENSHCOG00000016006	pdcd11	92	37.909	ENSCAPG00000005386	PDCD11	99	38.384	Cavia_aperea
ENSHCOG00000016006	pdcd11	99	42.156	ENSCPOG00000010957	PDCD11	99	42.632	Cavia_porcellus
ENSHCOG00000016006	pdcd11	99	42.842	ENSCCAG00000018950	PDCD11	99	42.660	Cebus_capucinus
ENSHCOG00000016006	pdcd11	99	43.016	ENSCATG00000044331	PDCD11	99	42.865	Cercocebus_atys
ENSHCOG00000016006	pdcd11	99	42.766	ENSCLAG00000001029	PDCD11	99	42.713	Chinchilla_lanigera
ENSHCOG00000016006	pdcd11	99	42.986	ENSCSAG00000005346	PDCD11	99	42.797	Chlorocebus_sabaeus
ENSHCOG00000016006	pdcd11	77	72.093	ENSCHOG00000004796	PDCD11	73	72.093	Choloepus_hoffmanni
ENSHCOG00000016006	pdcd11	91	63.557	ENSCPBG00000024487	PDCD11	99	63.848	Chrysemys_picta_bellii
ENSHCOG00000016006	pdcd11	99	42.933	ENSCANG00000043300	PDCD11	99	42.827	Colobus_angolensis_palliatus
ENSHCOG00000016006	pdcd11	99	42.326	ENSCGRG00001006458	Pdcd11	99	42.827	Cricetulus_griseus_chok1gshd
ENSHCOG00000016006	pdcd11	99	42.197	ENSCGRG00000003583	Pdcd11	99	42.698	Cricetulus_griseus_crigri
ENSHCOG00000016006	pdcd11	97	67.964	ENSCSEG00000010739	pdcd11	99	67.946	Cynoglossus_semilaevis
ENSHCOG00000016006	pdcd11	100	72.249	ENSCVAG00000018903	pdcd11	100	71.611	Cyprinodon_variegatus
ENSHCOG00000016006	pdcd11	100	51.788	ENSDARG00000052480	pdcd11	100	51.788	Danio_rerio
ENSHCOG00000016006	pdcd11	99	42.759	ENSDNOG00000013838	PDCD11	99	42.579	Dasypus_novemcinctus
ENSHCOG00000016006	pdcd11	99	42.826	ENSDORG00000010420	Pdcd11	99	43.050	Dipodomys_ordii
ENSHCOG00000016006	pdcd11	93	39.175	ENSETEG00000000813	PDCD11	98	39.048	Echinops_telfairi
ENSHCOG00000016006	pdcd11	72	50.000	ENSEBUG00000002358	-	86	49.655	Eptatretus_burgeri
ENSHCOG00000016006	pdcd11	95	43.798	ENSEASG00005015159	PDCD11	99	43.795	Equus_asinus_asinus
ENSHCOG00000016006	pdcd11	99	43.875	ENSECAG00000020507	PDCD11	99	43.707	Equus_caballus
ENSHCOG00000016006	pdcd11	87	50.000	ENSEEUG00000009245	PDCD11	89	50.000	Erinaceus_europaeus
ENSHCOG00000016006	pdcd11	100	56.970	ENSELUG00000004211	pdcd11	99	57.080	Esox_lucius
ENSHCOG00000016006	pdcd11	99	43.203	ENSFCAG00000002384	PDCD11	99	43.031	Felis_catus
ENSHCOG00000016006	pdcd11	99	43.952	ENSFALG00000008775	PDCD11	99	43.980	Ficedula_albicollis
ENSHCOG00000016006	pdcd11	99	42.102	ENSFDAG00000009532	PDCD11	99	41.980	Fukomys_damarensis
ENSHCOG00000016006	pdcd11	90	87.622	ENSFHEG00000022997	pdcd11	96	87.622	Fundulus_heteroclitus
ENSHCOG00000016006	pdcd11	99	59.925	ENSGMOG00000004186	pdcd11	94	59.500	Gadus_morhua
ENSHCOG00000016006	pdcd11	77	40.928	ENSGALG00000008265	PDCD11	97	40.832	Gallus_gallus
ENSHCOG00000016006	pdcd11	99	63.363	ENSGAFG00000012806	pdcd11	100	63.363	Gambusia_affinis
ENSHCOG00000016006	pdcd11	100	67.263	ENSGACG00000018233	pdcd11	96	81.842	Gasterosteus_aculeatus
ENSHCOG00000016006	pdcd11	95	45.732	ENSGAGG00000024314	PDCD11	100	45.758	Gopherus_agassizii
ENSHCOG00000016006	pdcd11	99	43.008	ENSGGOG00000011621	PDCD11	99	42.804	Gorilla_gorilla
ENSHCOG00000016006	pdcd11	99	70.374	ENSHBUG00000020226	pdcd11	99	70.468	Haplochromis_burtoni
ENSHCOG00000016006	pdcd11	99	42.796	ENSHGLG00000001462	PDCD11	99	42.515	Heterocephalus_glaber_female
ENSHCOG00000016006	pdcd11	99	42.212	ENSHGLG00100018779	PDCD11	99	41.929	Heterocephalus_glaber_male
ENSHCOG00000016006	pdcd11	62	50.521	ENSIPUG00000015102	pdcd11	99	52.376	Ictalurus_punctatus
ENSHCOG00000016006	pdcd11	99	42.842	ENSSTOG00000014553	PDCD11	99	43.116	Ictidomys_tridecemlineatus
ENSHCOG00000016006	pdcd11	99	43.406	ENSJJAG00000015523	Pdcd11	99	43.194	Jaculus_jaculus
ENSHCOG00000016006	pdcd11	50	63.961	ENSKMAG00000021182	pdcd11	99	63.961	Kryptolebias_marmoratus
ENSHCOG00000016006	pdcd11	100	52.378	ENSLOCG00000011818	pdcd11	100	52.378	Lepisosteus_oculatus
ENSHCOG00000016006	pdcd11	99	43.777	ENSLAFG00000008398	PDCD11	99	43.925	Loxodonta_africana
ENSHCOG00000016006	pdcd11	99	43.076	ENSMFAG00000044058	PDCD11	99	43.016	Macaca_fascicularis
ENSHCOG00000016006	pdcd11	99	42.970	ENSMMUG00000007058	PDCD11	99	42.910	Macaca_mulatta
ENSHCOG00000016006	pdcd11	99	43.069	ENSMNEG00000040726	PDCD11	99	43.228	Macaca_nemestrina
ENSHCOG00000016006	pdcd11	99	42.987	ENSMLEG00000040978	PDCD11	99	43.010	Mandrillus_leucophaeus
ENSHCOG00000016006	pdcd11	100	71.067	ENSMAMG00000009572	pdcd11	100	71.413	Mastacembelus_armatus
ENSHCOG00000016006	pdcd11	99	70.319	ENSMZEG00005008949	pdcd11	99	70.413	Maylandia_zebra
ENSHCOG00000016006	pdcd11	99	43.145	ENSMGAG00000010482	PDCD11	99	43.587	Meleagris_gallopavo
ENSHCOG00000016006	pdcd11	90	46.269	ENSMAUG00000014924	Pdcd11	90	60.000	Mesocricetus_auratus
ENSHCOG00000016006	pdcd11	99	43.501	ENSMICG00000012421	PDCD11	99	43.039	Microcebus_murinus
ENSHCOG00000016006	pdcd11	99	42.804	ENSMOCG00000021792	Pdcd11	99	42.513	Microtus_ochrogaster
ENSHCOG00000016006	pdcd11	99	59.271	ENSMMOG00000007572	pdcd11	98	65.251	Mola_mola
ENSHCOG00000016006	pdcd11	93	48.797	ENSMODG00000011077	PDCD11	100	41.443	Monodelphis_domestica
ENSHCOG00000016006	pdcd11	100	59.397	ENSMALG00000003859	pdcd11	99	67.100	Monopterus_albus
ENSHCOG00000016006	pdcd11	99	42.410	MGP_CAROLIEiJ_G0023050	Pdcd11	99	42.575	Mus_caroli
ENSHCOG00000016006	pdcd11	99	42.259	ENSMUSG00000025047	Pdcd11	99	42.363	Mus_musculus
ENSHCOG00000016006	pdcd11	99	42.485	MGP_PahariEiJ_G0014540	Pdcd11	99	42.265	Mus_pahari
ENSHCOG00000016006	pdcd11	99	42.357	MGP_SPRETEiJ_G0023971	Pdcd11	99	42.560	Mus_spretus
ENSHCOG00000016006	pdcd11	99	43.220	ENSMPUG00000016829	PDCD11	99	43.464	Mustela_putorius_furo
ENSHCOG00000016006	pdcd11	99	43.015	ENSMLUG00000004997	PDCD11	75	40.139	Myotis_lucifugus
ENSHCOG00000016006	pdcd11	99	42.411	ENSNGAG00000018143	Pdcd11	99	42.516	Nannospalax_galili
ENSHCOG00000016006	pdcd11	85	77.814	ENSNBRG00000021596	pdcd11	94	72.254	Neolamprologus_brichardi
ENSHCOG00000016006	pdcd11	99	42.212	ENSNLEG00000026700	PDCD11	99	41.862	Nomascus_leucogenys
ENSHCOG00000016006	pdcd11	65	68.000	ENSMEUG00000013719	-	56	68.000	Notamacropus_eugenii
ENSHCOG00000016006	pdcd11	98	44.437	ENSOPRG00000010593	PDCD11	96	44.033	Ochotona_princeps
ENSHCOG00000016006	pdcd11	99	42.375	ENSODEG00000008079	PDCD11	99	42.322	Octodon_degus
ENSHCOG00000016006	pdcd11	99	70.760	ENSONIG00000018835	pdcd11	99	71.129	Oreochromis_niloticus
ENSHCOG00000016006	pdcd11	99	42.434	ENSOANG00000001636	-	99	42.310	Ornithorhynchus_anatinus
ENSHCOG00000016006	pdcd11	99	42.458	ENSOCUG00000006312	PDCD11	99	42.479	Oryctolagus_cuniculus
ENSHCOG00000016006	pdcd11	100	68.462	ENSORLG00020003642	pdcd11	100	68.482	Oryzias_latipes_hni
ENSHCOG00000016006	pdcd11	100	68.279	ENSORLG00015001618	pdcd11	100	68.299	Oryzias_latipes_hsok
ENSHCOG00000016006	pdcd11	65	68.624	ENSOMEG00000010904	pdcd11	99	68.718	Oryzias_melastigma
ENSHCOG00000016006	pdcd11	99	42.834	ENSOGAG00000008683	PDCD11	99	42.751	Otolemur_garnettii
ENSHCOG00000016006	pdcd11	99	44.027	ENSPPAG00000024593	PDCD11	99	43.746	Pan_paniscus
ENSHCOG00000016006	pdcd11	99	43.309	ENSPPRG00000015133	PDCD11	99	43.289	Panthera_pardus
ENSHCOG00000016006	pdcd11	99	43.361	ENSPTIG00000011433	PDCD11	99	43.289	Panthera_tigris_altaica
ENSHCOG00000016006	pdcd11	99	43.228	ENSPTRG00000002911	PDCD11	99	42.865	Pan_troglodytes
ENSHCOG00000016006	pdcd11	99	42.925	ENSPANG00000020959	PDCD11	99	42.827	Papio_anubis
ENSHCOG00000016006	pdcd11	99	52.666	ENSPKIG00000000973	pdcd11	99	52.721	Paramormyrops_kingsleyae
ENSHCOG00000016006	pdcd11	78	42.145	ENSPSIG00000005102	PDCD11	95	42.164	Pelodiscus_sinensis
ENSHCOG00000016006	pdcd11	78	64.882	ENSPMGG00000007289	pdcd11	100	64.454	Periophthalmus_magnuspinnatus
ENSHCOG00000016006	pdcd11	99	42.155	ENSPEMG00000010315	Pdcd11	99	42.220	Peromyscus_maniculatus_bairdii
ENSHCOG00000016006	pdcd11	99	39.471	ENSPMAG00000003098	pdcd11	99	39.672	Petromyzon_marinus
ENSHCOG00000016006	pdcd11	99	42.760	ENSPCIG00000001118	PDCD11	99	43.031	Phascolarctos_cinereus
ENSHCOG00000016006	pdcd11	100	68.465	ENSPFOG00000006012	pdcd11	100	68.647	Poecilia_formosa
ENSHCOG00000016006	pdcd11	100	62.124	ENSPLAG00000014494	pdcd11	100	62.699	Poecilia_latipinna
ENSHCOG00000016006	pdcd11	100	55.687	ENSPMEG00000018177	pdcd11	98	62.923	Poecilia_mexicana
ENSHCOG00000016006	pdcd11	100	67.947	ENSPREG00000000475	pdcd11	100	68.129	Poecilia_reticulata
ENSHCOG00000016006	pdcd11	99	43.413	ENSPPYG00000002621	PDCD11	99	43.566	Pongo_abelii
ENSHCOG00000016006	pdcd11	64	51.056	ENSPCAG00000011663	PDCD11	66	49.520	Procavia_capensis
ENSHCOG00000016006	pdcd11	90	46.862	ENSPCOG00000023327	PDCD11	97	46.595	Propithecus_coquereli
ENSHCOG00000016006	pdcd11	99	42.691	ENSPVAG00000004176	PDCD11	99	42.744	Pteropus_vampyrus
ENSHCOG00000016006	pdcd11	99	70.485	ENSPNYG00000003979	pdcd11	99	70.579	Pundamilia_nyererei
ENSHCOG00000016006	pdcd11	95	54.774	ENSPNAG00000017225	pdcd11	100	55.060	Pygocentrus_nattereri
ENSHCOG00000016006	pdcd11	99	43.016	ENSRNOG00000020304	Pdcd11	99	42.684	Rattus_norvegicus
ENSHCOG00000016006	pdcd11	99	42.759	ENSRBIG00000011889	PDCD11	99	42.759	Rhinopithecus_bieti
ENSHCOG00000016006	pdcd11	99	42.759	ENSRROG00000030483	PDCD11	99	42.759	Rhinopithecus_roxellana
ENSHCOG00000016006	pdcd11	84	44.815	YMR229C	-	94	32.037	Saccharomyces_cerevisiae
ENSHCOG00000016006	pdcd11	99	42.720	ENSSBOG00000030308	PDCD11	99	41.683	Saimiri_boliviensis_boliviensis
ENSHCOG00000016006	pdcd11	100	42.119	ENSSHAG00000018258	PDCD11	100	41.917	Sarcophilus_harrisii
ENSHCOG00000016006	pdcd11	100	53.374	ENSSFOG00015003881	pdcd11	100	53.103	Scleropages_formosus
ENSHCOG00000016006	pdcd11	100	72.292	ENSSMAG00000006612	pdcd11	100	72.183	Scophthalmus_maximus
ENSHCOG00000016006	pdcd11	95	72.831	ENSSDUG00000021302	pdcd11	99	72.964	Seriola_dumerili
ENSHCOG00000016006	pdcd11	76	62.745	ENSSARG00000002540	PDCD11	71	62.745	Sorex_araneus
ENSHCOG00000016006	pdcd11	97	71.218	ENSSPAG00000017558	pdcd11	100	71.542	Stegastes_partitus
ENSHCOG00000016006	pdcd11	99	43.045	ENSSSCG00000010599	PDCD11	99	43.428	Sus_scrofa
ENSHCOG00000016006	pdcd11	70	63.018	ENSTRUG00000014291	pdcd11	100	63.331	Takifugu_rubripes
ENSHCOG00000016006	pdcd11	99	65.206	ENSTNIG00000012085	pdcd11	99	65.329	Tetraodon_nigroviridis
ENSHCOG00000016006	pdcd11	99	40.283	ENSTBEG00000001893	PDCD11	93	61.062	Tupaia_belangeri
ENSHCOG00000016006	pdcd11	93	42.266	ENSTTRG00000003356	PDCD11	93	42.687	Tursiops_truncatus
ENSHCOG00000016006	pdcd11	99	43.109	ENSUAMG00000018015	PDCD11	99	43.203	Ursus_americanus
ENSHCOG00000016006	pdcd11	99	42.549	ENSUMAG00000023567	PDCD11	99	42.586	Ursus_maritimus
ENSHCOG00000016006	pdcd11	69	50.000	ENSVPAG00000007405	PDCD11	72	50.000	Vicugna_pacos
ENSHCOG00000016006	pdcd11	99	43.266	ENSVVUG00000004457	PDCD11	99	43.349	Vulpes_vulpes
ENSHCOG00000016006	pdcd11	100	43.760	ENSXETG00000009482	pdcd11	100	43.888	Xenopus_tropicalis
ENSHCOG00000016006	pdcd11	100	57.285	ENSXCOG00000012420	pdcd11	100	57.450	Xiphophorus_couchianus
ENSHCOG00000016006	pdcd11	100	68.575	ENSXMAG00000004638	pdcd11	100	68.757	Xiphophorus_maculatus