EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000016098 (Gene tree)
Gene ID: 109522716
Gene Symbol: pcca
Alias: fb92g02|wu:fb92g02|zgc:100925
Full Name: propionyl-CoA carboxylase subunit alpha
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 60626 bases
Position: chrKV879733.1:41784-102409
Accession: 109522716
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000025675	RimK	PF08443.11	5.8e-05	1	1
ENSHCOP00000012932	RimK	PF08443.11	6.5e-05	1	1
ENSHCOP00000012940	RimK	PF08443.11	7.4e-05	1	1
ENSHCOP00000012941	RimK	PF08443.11	7.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027120	-	2379	-	ENSHCOP00000012932	644 (aa)	-	-
ENSHCOT00000027124	-	2533	-	ENSHCOP00000012941	712 (aa)	-	UPI00094EBFF4
ENSHCOT00000020106	-	2533	XM_019881477	ENSHCOP00000012940	712 (aa)	XP_019737036	UPI00094EBFF4
ENSHCOT00000027112	-	1941	-	ENSHCOP00000025675	646 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000016098's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq00280	Valine, leucine and isoleucine degradation	KEGG
hcq00630	Glyoxylate and dicarboxylate metabolism	KEGG
hcq00640	Propanoate metabolism	KEGG
hcq01100	Metabolic pathways	KEGG
hcq01200	Carbon metabolism	KEGG

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000016098	pcca	98	42.260	ENSHCOG00000010503	mccc1	98	42.878

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000016098	pcca	100	74.224	ENSG00000175198	PCCA	99	83.121	Homo_sapiens
ENSHCOG00000016098	pcca	100	86.180	ENSAPOG00000002389	pcca	100	86.180	Acanthochromis_polyacanthus
ENSHCOG00000016098	pcca	98	75.158	ENSAMEG00000016627	PCCA	99	75.158	Ailuropoda_melanoleuca
ENSHCOG00000016098	pcca	91	90.196	ENSACIG00000015913	PCCA	98	90.196	Amphilophus_citrinellus
ENSHCOG00000016098	pcca	100	86.335	ENSAOCG00000005451	pcca	100	84.551	Amphiprion_ocellaris
ENSHCOG00000016098	pcca	100	86.491	ENSAPEG00000002955	pcca	100	84.551	Amphiprion_percula
ENSHCOG00000016098	pcca	100	86.491	ENSATEG00000004273	pcca	100	84.270	Anabas_testudineus
ENSHCOG00000016098	pcca	100	77.245	ENSAPLG00000002609	PCCA	98	77.320	Anas_platyrhynchos
ENSHCOG00000016098	pcca	98	74.363	ENSANAG00000031162	PCCA	95	74.363	Aotus_nancymaae
ENSHCOG00000016098	pcca	100	86.180	ENSACLG00000006725	pcca	99	83.989	Astatotilapia_calliptera
ENSHCOG00000016098	pcca	100	74.429	ENSBTAG00000010672	PCCA	96	73.588	Bos_taurus
ENSHCOG00000016098	pcca	100	73.758	ENSCJAG00000020998	PCCA	95	74.551	Callithrix_jacchus
ENSHCOG00000016098	pcca	100	75.270	ENSCAFG00000005838	PCCA	95	74.212	Canis_familiaris
ENSHCOG00000016098	pcca	100	75.270	ENSCAFG00020022683	PCCA	95	74.212	Canis_lupus_dingo
ENSHCOG00000016098	pcca	100	75.851	ENSCHIG00000007335	PCCA	95	74.892	Capra_hircus
ENSHCOG00000016098	pcca	100	74.224	ENSTSYG00000000053	PCCA	95	74.963	Carlito_syrichta
ENSHCOG00000016098	pcca	100	75.000	ENSCPOG00000011274	PCCA	95	74.388	Cavia_porcellus
ENSHCOG00000016098	pcca	100	74.224	ENSCCAG00000022253	PCCA	95	75.000	Cebus_capucinus
ENSHCOG00000016098	pcca	100	74.379	ENSCATG00000034177	PCCA	95	75.299	Cercocebus_atys
ENSHCOG00000016098	pcca	100	74.379	ENSCLAG00000003205	PCCA	98	73.007	Chinchilla_lanigera
ENSHCOG00000016098	pcca	100	74.534	ENSCSAG00000017493	PCCA	97	73.023	Chlorocebus_sabaeus
ENSHCOG00000016098	pcca	90	76.333	ENSCHOG00000000247	PCCA	90	72.211	Choloepus_hoffmanni
ENSHCOG00000016098	pcca	100	76.863	ENSCPBG00000018046	PCCA	98	75.391	Chrysemys_picta_bellii
ENSHCOG00000016098	pcca	100	63.580	ENSCING00000008081	-	99	62.393	Ciona_intestinalis
ENSHCOG00000016098	pcca	100	62.751	ENSCSAVG00000011361	-	100	63.299	Ciona_savignyi
ENSHCOG00000016098	pcca	100	74.379	ENSCANG00000013062	PCCA	95	75.299	Colobus_angolensis_palliatus
ENSHCOG00000016098	pcca	100	75.311	ENSCGRG00001015819	Pcca	98	73.558	Cricetulus_griseus_chok1gshd
ENSHCOG00000016098	pcca	100	75.311	ENSCGRG00000014796	Pcca	97	74.006	Cricetulus_griseus_crigri
ENSHCOG00000016098	pcca	100	85.093	ENSCSEG00000016645	pcca	100	82.865	Cynoglossus_semilaevis
ENSHCOG00000016098	pcca	97	85.417	ENSCVAG00000010430	pcca	100	85.417	Cyprinodon_variegatus
ENSHCOG00000016098	pcca	100	74.689	ENSDNOG00000042384	PCCA	100	74.689	Dasypus_novemcinctus
ENSHCOG00000016098	pcca	100	65.528	ENSDORG00000012949	Pcca	95	65.093	Dipodomys_ordii
ENSHCOG00000016098	pcca	100	75.697	ENSEASG00005022166	PCCA	97	74.048	Equus_asinus_asinus
ENSHCOG00000016098	pcca	100	75.697	ENSECAG00000018952	PCCA	97	74.048	Equus_caballus
ENSHCOG00000016098	pcca	100	81.211	ENSELUG00000002383	pcca	100	81.364	Esox_lucius
ENSHCOG00000016098	pcca	100	75.387	ENSFCAG00000012573	PCCA	95	76.269	Felis_catus
ENSHCOG00000016098	pcca	100	74.379	ENSFDAG00000005817	PCCA	95	72.727	Fukomys_damarensis
ENSHCOG00000016098	pcca	100	85.248	ENSFHEG00000011811	pcca	98	84.451	Fundulus_heteroclitus
ENSHCOG00000016098	pcca	100	85.404	ENSGAFG00000011218	pcca	98	84.023	Gambusia_affinis
ENSHCOG00000016098	pcca	100	86.491	ENSGACG00000002342	pcca	100	86.308	Gasterosteus_aculeatus
ENSHCOG00000016098	pcca	98	76.789	ENSGAGG00000010472	PCCA	95	76.789	Gopherus_agassizii
ENSHCOG00000016098	pcca	100	74.379	ENSGGOG00000012516	PCCA	95	75.150	Gorilla_gorilla
ENSHCOG00000016098	pcca	100	74.534	ENSHGLG00000011057	PCCA	98	72.727	Heterocephalus_glaber_female
ENSHCOG00000016098	pcca	100	74.534	ENSHGLG00100001468	PCCA	98	72.727	Heterocephalus_glaber_male
ENSHCOG00000016098	pcca	100	75.466	ENSSTOG00000021045	PCCA	100	74.892	Ictidomys_tridecemlineatus
ENSHCOG00000016098	pcca	100	74.845	ENSJJAG00000011150	Pcca	97	73.580	Jaculus_jaculus
ENSHCOG00000016098	pcca	100	86.646	ENSKMAG00000014632	pcca	98	85.122	Kryptolebias_marmoratus
ENSHCOG00000016098	pcca	100	77.795	ENSLACG00000012828	PCCA	100	77.795	Latimeria_chalumnae
ENSHCOG00000016098	pcca	100	75.621	ENSLAFG00000014958	PCCA	100	76.198	Loxodonta_africana
ENSHCOG00000016098	pcca	100	74.379	ENSMFAG00000020427	PCCA	95	75.299	Macaca_fascicularis
ENSHCOG00000016098	pcca	100	74.224	ENSMMUG00000004493	PCCA	95	75.150	Macaca_mulatta
ENSHCOG00000016098	pcca	100	74.379	ENSMNEG00000045261	PCCA	95	75.299	Macaca_nemestrina
ENSHCOG00000016098	pcca	100	74.379	ENSMLEG00000033842	PCCA	95	75.299	Mandrillus_leucophaeus
ENSHCOG00000016098	pcca	100	86.025	ENSMAMG00000009304	pcca	100	83.848	Mastacembelus_armatus
ENSHCOG00000016098	pcca	100	86.180	ENSMZEG00005018487	pcca	99	83.989	Maylandia_zebra
ENSHCOG00000016098	pcca	65	82.979	ENSMGAG00000014892	PCCA	100	82.979	Meleagris_gallopavo
ENSHCOG00000016098	pcca	98	75.318	ENSMAUG00000000626	Pcca	93	75.318	Mesocricetus_auratus
ENSHCOG00000016098	pcca	67	78.391	ENSMICG00000038258	-	89	76.360	Microcebus_murinus
ENSHCOG00000016098	pcca	100	75.155	ENSMICG00000010685	-	95	75.898	Microcebus_murinus
ENSHCOG00000016098	pcca	100	75.000	ENSMOCG00000015156	Pcca	99	73.277	Microtus_ochrogaster
ENSHCOG00000016098	pcca	100	85.870	ENSMALG00000009947	pcca	100	83.485	Monopterus_albus
ENSHCOG00000016098	pcca	100	75.621	MGP_CAROLIEiJ_G0019618	Pcca	97	74.678	Mus_caroli
ENSHCOG00000016098	pcca	100	75.621	ENSMUSG00000041650	Pcca	97	74.678	Mus_musculus
ENSHCOG00000016098	pcca	100	75.621	MGP_PahariEiJ_G0030634	Pcca	98	73.596	Mus_pahari
ENSHCOG00000016098	pcca	100	75.466	MGP_SPRETEiJ_G0020515	Pcca	97	74.535	Mus_spretus
ENSHCOG00000016098	pcca	100	75.851	ENSMPUG00000011333	PCCA	99	75.842	Mustela_putorius_furo
ENSHCOG00000016098	pcca	78	77.362	ENSMLUG00000005729	PCCA	94	75.318	Myotis_lucifugus
ENSHCOG00000016098	pcca	100	69.195	ENSNGAG00000016528	Pcca	97	68.227	Nannospalax_galili
ENSHCOG00000016098	pcca	93	66.555	ENSNBRG00000019075	pcca	87	86.538	Neolamprologus_brichardi
ENSHCOG00000016098	pcca	100	75.000	ENSODEG00000010667	PCCA	94	74.290	Octodon_degus
ENSHCOG00000016098	pcca	100	86.646	ENSONIG00000013151	pcca	99	84.410	Oreochromis_niloticus
ENSHCOG00000016098	pcca	89	72.855	ENSOCUG00000017230	PCCA	93	71.024	Oryctolagus_cuniculus
ENSHCOG00000016098	pcca	100	86.025	ENSORLG00000000361	pcca	100	82.517	Oryzias_latipes
ENSHCOG00000016098	pcca	100	86.180	ENSORLG00020005749	pcca	100	82.657	Oryzias_latipes_hni
ENSHCOG00000016098	pcca	100	86.025	ENSORLG00015012738	pcca	100	82.287	Oryzias_latipes_hsok
ENSHCOG00000016098	pcca	100	85.248	ENSOMEG00000001912	pcca	100	82.073	Oryzias_melastigma
ENSHCOG00000016098	pcca	100	75.466	ENSOGAG00000017088	PCCA	97	73.588	Otolemur_garnettii
ENSHCOG00000016098	pcca	100	75.851	ENSOARG00000004442	PCCA	100	75.851	Ovis_aries
ENSHCOG00000016098	pcca	100	74.224	ENSPPAG00000036841	PCCA	95	75.000	Pan_paniscus
ENSHCOG00000016098	pcca	100	75.387	ENSPPRG00000006626	PCCA	95	76.269	Panthera_pardus
ENSHCOG00000016098	pcca	98	75.397	ENSPTIG00000009732	PCCA	100	75.397	Panthera_tigris_altaica
ENSHCOG00000016098	pcca	100	74.224	ENSPTRG00000006001	PCCA	95	75.000	Pan_troglodytes
ENSHCOG00000016098	pcca	100	80.280	ENSPKIG00000004765	pcca	100	77.980	Paramormyrops_kingsleyae
ENSHCOG00000016098	pcca	100	77.795	ENSPSIG00000009154	PCCA	100	77.795	Pelodiscus_sinensis
ENSHCOG00000016098	pcca	100	75.000	ENSPEMG00000009083	Pcca	98	73.136	Peromyscus_maniculatus_bairdii
ENSHCOG00000016098	pcca	96	75.444	ENSPCIG00000027261	PCCA	94	70.972	Phascolarctos_cinereus
ENSHCOG00000016098	pcca	100	85.248	ENSPFOG00000014855	pcca	98	83.738	Poecilia_formosa
ENSHCOG00000016098	pcca	100	85.248	ENSPLAG00000016583	pcca	98	83.738	Poecilia_latipinna
ENSHCOG00000016098	pcca	100	85.093	ENSPMEG00000011613	pcca	98	83.595	Poecilia_mexicana
ENSHCOG00000016098	pcca	100	84.472	ENSPREG00000007537	pcca	100	84.627	Poecilia_reticulata
ENSHCOG00000016098	pcca	100	74.068	ENSPPYG00000005473	PCCA	97	72.458	Pongo_abelii
ENSHCOG00000016098	pcca	100	74.845	ENSPCOG00000015321	PCCA	95	75.599	Propithecus_coquereli
ENSHCOG00000016098	pcca	100	83.385	ENSPNYG00000008226	pcca	100	83.837	Pundamilia_nyererei
ENSHCOG00000016098	pcca	100	84.161	ENSPNAG00000011078	pcca	100	82.022	Pygocentrus_nattereri
ENSHCOG00000016098	pcca	100	74.379	ENSRROG00000030936	PCCA	95	75.299	Rhinopithecus_roxellana
ENSHCOG00000016098	pcca	100	74.534	ENSSBOG00000020005	PCCA	95	75.299	Saimiri_boliviensis_boliviensis
ENSHCOG00000016098	pcca	54	85.387	ENSSHAG00000014732	-	100	85.387	Sarcophilus_harrisii
ENSHCOG00000016098	pcca	100	81.366	ENSSFOG00015021986	pcca	100	79.073	Scleropages_formosus
ENSHCOG00000016098	pcca	100	87.267	ENSSMAG00000018126	pcca	100	87.267	Scophthalmus_maximus
ENSHCOG00000016098	pcca	100	87.578	ENSSDUG00000021326	pcca	100	85.253	Seriola_dumerili
ENSHCOG00000016098	pcca	100	87.422	ENSSLDG00000016568	pcca	100	85.112	Seriola_lalandi_dorsalis
ENSHCOG00000016098	pcca	98	74.204	ENSSPUG00000006036	PCCA	96	74.204	Sphenodon_punctatus
ENSHCOG00000016098	pcca	93	85.595	ENSSPAG00000022191	pcca	91	83.759	Stegastes_partitus
ENSHCOG00000016098	pcca	100	75.851	ENSSSCG00000009522	PCCA	98	73.633	Sus_scrofa
ENSHCOG00000016098	pcca	100	74.149	ENSTGUG00000010915	PCCA	100	73.768	Taeniopygia_guttata
ENSHCOG00000016098	pcca	100	86.646	ENSTRUG00000004990	pcca	100	83.848	Takifugu_rubripes
ENSHCOG00000016098	pcca	100	75.154	ENSTTRG00000002569	PCCA	92	75.857	Tursiops_truncatus
ENSHCOG00000016098	pcca	100	75.232	ENSUMAG00000023453	PCCA	100	75.232	Ursus_maritimus
ENSHCOG00000016098	pcca	100	75.116	ENSVVUG00000013550	PCCA	99	75.552	Vulpes_vulpes
ENSHCOG00000016098	pcca	100	84.938	ENSXCOG00000014159	pcca	100	85.084	Xiphophorus_couchianus
ENSHCOG00000016098	pcca	100	85.248	ENSXMAG00000014869	pcca	98	83.880	Xiphophorus_maculatus