EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000016154 (Gene tree)
Gene ID: 109526658
Gene Symbol: srm
Alias: fa18b03|id:ibd1177|wu:fa18b03|zgc:63600
Full Name: spermidine synthase
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 5373 bases
Position: chrKV880263.1:1433694-1439066
Accession: 109526658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000013071	Methyltransf_31	PF13847.6	6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000020288	-	1794	XM_019888082	ENSHCOP00000013071	289 (aa)	XP_019743641	UPI00094E15CF

Gene Model

Click here to download ENSHCOG00000016154's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq00270	Cysteine and methionine metabolism	KEGG
hcq00330	Arginine and proline metabolism	KEGG
hcq00410	beta-Alanine metabolism	KEGG
hcq00480	Glutathione metabolism	KEGG
hcq01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000016154's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000016154	srm	99	83.217	ENSATEG00000017326	srm	99	83.217	Anabas_testudineus
ENSHCOG00000016154	srm	100	84.775	ENSTRUG00000019507	srm	100	84.775	Takifugu_rubripes
ENSHCOG00000016154	srm	95	75.912	ENSTTRG00000001316	SRM	95	75.912	Tursiops_truncatus