EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000016164 (Gene tree)
Gene ID: 109526647
Gene Symbol: exosc10
Alias: zgc:55695
Full Name: exosome component 10
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 10454 bases
Position: chrKV880263.1:1421930-1432383
Accession: 109526647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000025805	HRDC	PF00570.23	9.3e-12	1	1
ENSHCOP00000025805	PMC2NT	PF08066.12	2e-20	1	1
ENSHCOP00000025805	DNA_pol_A_exo1	PF01612.20	4e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027168	-	2991	XM_019888058	ENSHCOP00000025805	890 (aa)	XP_019743617	UPI00094E5C6F

Gene Model

Click here to download ENSHCOG00000016164's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000016164's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000016164	exosc10	98	60.771	ENSG00000171824	EXOSC10	98	60.589	Homo_sapiens
ENSHCOG00000016164	exosc10	99	79.484	ENSAPOG00000013304	exosc10	100	79.036	Acanthochromis_polyacanthus
ENSHCOG00000016164	exosc10	98	61.538	ENSAMEG00000009546	EXOSC10	98	61.243	Ailuropoda_melanoleuca
ENSHCOG00000016164	exosc10	96	71.013	ENSACIG00000020455	exosc10	98	70.994	Amphilophus_citrinellus
ENSHCOG00000016164	exosc10	99	71.717	ENSAOCG00000018823	exosc10	100	71.156	Amphiprion_ocellaris
ENSHCOG00000016164	exosc10	99	78.924	ENSAPEG00000017786	exosc10	99	78.475	Amphiprion_percula
ENSHCOG00000016164	exosc10	99	79.260	ENSATEG00000017271	exosc10	100	78.924	Anabas_testudineus
ENSHCOG00000016164	exosc10	96	60.462	ENSAPLG00000006652	EXOSC10	98	60.347	Anas_platyrhynchos
ENSHCOG00000016164	exosc10	95	58.721	ENSANAG00000031112	EXOSC10	99	58.469	Aotus_nancymaae
ENSHCOG00000016164	exosc10	98	79.019	ENSACLG00000025226	exosc10	100	77.915	Astatotilapia_calliptera
ENSHCOG00000016164	exosc10	98	65.140	ENSAMXG00000014510	exosc10	98	65.363	Astyanax_mexicanus
ENSHCOG00000016164	exosc10	75	65.300	ENSBTAG00000002590	EXOSC10	97	65.300	Bos_taurus
ENSHCOG00000016164	exosc10	61	37.230	WBGene00000796	crn-3	61	37.230	Caenorhabditis_elegans
ENSHCOG00000016164	exosc10	98	60.884	ENSCJAG00000002327	EXOSC10	98	60.747	Callithrix_jacchus
ENSHCOG00000016164	exosc10	98	61.080	ENSCAFG00000016721	EXOSC10	96	60.787	Canis_familiaris
ENSHCOG00000016164	exosc10	98	61.080	ENSCAFG00020002481	EXOSC10	96	60.787	Canis_lupus_dingo
ENSHCOG00000016164	exosc10	98	58.211	ENSCHIG00000020022	EXOSC10	98	58.032	Capra_hircus
ENSHCOG00000016164	exosc10	98	58.390	ENSTSYG00000006937	EXOSC10	98	58.324	Carlito_syrichta
ENSHCOG00000016164	exosc10	96	60.739	ENSCAPG00000006494	EXOSC10	99	61.085	Cavia_aperea
ENSHCOG00000016164	exosc10	98	60.589	ENSCPOG00000011628	EXOSC10	97	60.929	Cavia_porcellus
ENSHCOG00000016164	exosc10	98	57.740	ENSCCAG00000023223	EXOSC10	100	61.029	Cebus_capucinus
ENSHCOG00000016164	exosc10	98	61.130	ENSCATG00000039000	EXOSC10	91	67.974	Cercocebus_atys
ENSHCOG00000016164	exosc10	98	60.747	ENSCLAG00000005283	EXOSC10	98	60.791	Chinchilla_lanigera
ENSHCOG00000016164	exosc10	98	61.130	ENSCSAG00000000788	EXOSC10	98	60.948	Chlorocebus_sabaeus
ENSHCOG00000016164	exosc10	96	57.241	ENSCHOG00000012713	EXOSC10	86	63.007	Choloepus_hoffmanni
ENSHCOG00000016164	exosc10	98	60.606	ENSCPBG00000022004	EXOSC10	97	60.973	Chrysemys_picta_bellii
ENSHCOG00000016164	exosc10	61	50.712	ENSCSAVG00000009049	-	94	50.712	Ciona_savignyi
ENSHCOG00000016164	exosc10	97	60.751	ENSCANG00000042813	EXOSC10	98	60.795	Colobus_angolensis_palliatus
ENSHCOG00000016164	exosc10	97	61.583	ENSCGRG00001018469	Exosc10	97	61.283	Cricetulus_griseus_chok1gshd
ENSHCOG00000016164	exosc10	97	61.353	ENSCGRG00000002278	Exosc10	97	61.054	Cricetulus_griseus_crigri
ENSHCOG00000016164	exosc10	100	77.018	ENSCSEG00000005346	exosc10	99	76.682	Cynoglossus_semilaevis
ENSHCOG00000016164	exosc10	97	78.704	ENSCVAG00000016429	exosc10	99	77.140	Cyprinodon_variegatus
ENSHCOG00000016164	exosc10	97	66.516	ENSDARG00000037708	exosc10	98	66.258	Danio_rerio
ENSHCOG00000016164	exosc10	98	60.226	ENSDNOG00000011301	EXOSC10	99	60.271	Dasypus_novemcinctus
ENSHCOG00000016164	exosc10	98	56.655	ENSDORG00000003769	Exosc10	98	56.364	Dipodomys_ordii
ENSHCOG00000016164	exosc10	74	39.683	FBgn0038269	Rrp6	72	39.683	Drosophila_melanogaster
ENSHCOG00000016164	exosc10	93	59.834	ENSETEG00000000830	EXOSC10	98	59.549	Echinops_telfairi
ENSHCOG00000016164	exosc10	72	37.026	ENSEBUG00000004395	exosc10	99	37.481	Eptatretus_burgeri
ENSHCOG00000016164	exosc10	97	61.442	ENSEASG00005018716	EXOSC10	94	70.423	Equus_asinus_asinus
ENSHCOG00000016164	exosc10	98	61.791	ENSECAG00000011639	EXOSC10	98	61.652	Equus_caballus
ENSHCOG00000016164	exosc10	82	61.600	ENSEEUG00000001166	EXOSC10	83	61.600	Erinaceus_europaeus
ENSHCOG00000016164	exosc10	98	71.183	ENSELUG00000012870	exosc10	98	70.993	Esox_lucius
ENSHCOG00000016164	exosc10	98	60.520	ENSFCAG00000000052	EXOSC10	98	60.249	Felis_catus
ENSHCOG00000016164	exosc10	99	58.241	ENSFALG00000010287	EXOSC10	98	58.212	Ficedula_albicollis
ENSHCOG00000016164	exosc10	98	60.722	ENSFDAG00000002942	EXOSC10	98	60.271	Fukomys_damarensis
ENSHCOG00000016164	exosc10	98	77.038	ENSFHEG00000010678	exosc10	98	77.038	Fundulus_heteroclitus
ENSHCOG00000016164	exosc10	84	76.525	ENSGMOG00000006131	exosc10	90	76.525	Gadus_morhua
ENSHCOG00000016164	exosc10	99	59.511	ENSGALG00000003086	EXOSC10	98	59.288	Gallus_gallus
ENSHCOG00000016164	exosc10	99	76.557	ENSGAFG00000019222	exosc10	100	76.557	Gambusia_affinis
ENSHCOG00000016164	exosc10	99	74.186	ENSGACG00000007037	exosc10	99	74.186	Gasterosteus_aculeatus
ENSHCOG00000016164	exosc10	98	59.933	ENSGAGG00000000251	EXOSC10	100	60.513	Gopherus_agassizii
ENSHCOG00000016164	exosc10	98	60.998	ENSGGOG00000010572	EXOSC10	98	60.815	Gorilla_gorilla
ENSHCOG00000016164	exosc10	98	70.964	ENSHBUG00000020328	exosc10	100	69.647	Haplochromis_burtoni
ENSHCOG00000016164	exosc10	98	60.520	ENSHGLG00000011944	EXOSC10	98	60.226	Heterocephalus_glaber_female
ENSHCOG00000016164	exosc10	98	60.520	ENSHGLG00100014444	EXOSC10	98	60.226	Heterocephalus_glaber_male
ENSHCOG00000016164	exosc10	97	67.764	ENSIPUG00000021971	exosc10	97	67.537	Ictalurus_punctatus
ENSHCOG00000016164	exosc10	98	61.061	ENSSTOG00000005459	EXOSC10	98	60.767	Ictidomys_tridecemlineatus
ENSHCOG00000016164	exosc10	97	60.613	ENSJJAG00000013716	Exosc10	98	60.227	Jaculus_jaculus
ENSHCOG00000016164	exosc10	99	77.036	ENSKMAG00000015540	exosc10	99	76.810	Kryptolebias_marmoratus
ENSHCOG00000016164	exosc10	100	78.835	ENSLBEG00000022229	exosc10	100	78.387	Labrus_bergylta
ENSHCOG00000016164	exosc10	97	61.392	ENSLACG00000016691	EXOSC10	98	61.287	Latimeria_chalumnae
ENSHCOG00000016164	exosc10	97	67.198	ENSLOCG00000006443	exosc10	97	67.198	Lepisosteus_oculatus
ENSHCOG00000016164	exosc10	97	61.627	ENSLAFG00000016894	EXOSC10	97	61.556	Loxodonta_africana
ENSHCOG00000016164	exosc10	98	61.130	ENSMFAG00000038874	EXOSC10	98	60.181	Macaca_fascicularis
ENSHCOG00000016164	exosc10	98	61.243	ENSMMUG00000019322	EXOSC10	98	61.061	Macaca_mulatta
ENSHCOG00000016164	exosc10	98	61.130	ENSMNEG00000035812	EXOSC10	98	60.948	Macaca_nemestrina
ENSHCOG00000016164	exosc10	98	61.130	ENSMLEG00000025160	EXOSC10	98	60.948	Mandrillus_leucophaeus
ENSHCOG00000016164	exosc10	99	77.551	ENSMAMG00000019375	exosc10	100	77.438	Mastacembelus_armatus
ENSHCOG00000016164	exosc10	98	79.019	ENSMZEG00005013730	exosc10	100	77.915	Maylandia_zebra
ENSHCOG00000016164	exosc10	96	59.677	ENSMGAG00000004665	EXOSC10	99	59.447	Meleagris_gallopavo
ENSHCOG00000016164	exosc10	66	67.845	ENSMAUG00000019261	Exosc10	95	67.845	Mesocricetus_auratus
ENSHCOG00000016164	exosc10	97	61.889	ENSMICG00000003858	EXOSC10	98	61.705	Microcebus_murinus
ENSHCOG00000016164	exosc10	65	68.330	ENSMOCG00000016509	Exosc10	93	68.330	Microtus_ochrogaster
ENSHCOG00000016164	exosc10	99	72.116	ENSMMOG00000009265	exosc10	100	71.557	Mola_mola
ENSHCOG00000016164	exosc10	97	61.187	ENSMODG00000011194	EXOSC10	98	60.791	Monodelphis_domestica
ENSHCOG00000016164	exosc10	99	77.915	ENSMALG00000021322	exosc10	100	77.466	Monopterus_albus
ENSHCOG00000016164	exosc10	98	60.609	MGP_CAROLIEiJ_G0026802	Exosc10	95	68.020	Mus_caroli
ENSHCOG00000016164	exosc10	98	60.271	ENSMUSG00000017264	Exosc10	95	67.508	Mus_musculus
ENSHCOG00000016164	exosc10	98	60.045	MGP_PahariEiJ_G0029150	Exosc10	93	68.503	Mus_pahari
ENSHCOG00000016164	exosc10	98	60.497	MGP_SPRETEiJ_G0027795	Exosc10	95	67.851	Mus_spretus
ENSHCOG00000016164	exosc10	98	60.067	ENSMPUG00000016434	EXOSC10	96	59.888	Mustela_putorius_furo
ENSHCOG00000016164	exosc10	98	60.702	ENSMLUG00000004276	EXOSC10	98	60.633	Myotis_lucifugus
ENSHCOG00000016164	exosc10	98	60.767	ENSNGAG00000023829	Exosc10	98	60.698	Nannospalax_galili
ENSHCOG00000016164	exosc10	99	72.696	ENSNBRG00000006256	exosc10	100	71.829	Neolamprologus_brichardi
ENSHCOG00000016164	exosc10	97	60.710	ENSNLEG00000009539	EXOSC10	97	60.526	Nomascus_leucogenys
ENSHCOG00000016164	exosc10	65	89.189	ENSMEUG00000007020	-	71	89.189	Notamacropus_eugenii
ENSHCOG00000016164	exosc10	98	61.330	ENSOPRG00000012091	EXOSC10	99	60.248	Ochotona_princeps
ENSHCOG00000016164	exosc10	98	60.407	ENSODEG00000013285	EXOSC10	98	60.181	Octodon_degus
ENSHCOG00000016164	exosc10	88	79.745	ENSONIG00000002322	exosc10	100	79.745	Oreochromis_niloticus
ENSHCOG00000016164	exosc10	97	58.182	ENSOANG00000013322	EXOSC10	99	57.718	Ornithorhynchus_anatinus
ENSHCOG00000016164	exosc10	98	60.831	ENSOCUG00000013039	EXOSC10	99	61.017	Oryctolagus_cuniculus
ENSHCOG00000016164	exosc10	99	77.978	ENSORLG00000005117	exosc10	100	78.980	Oryzias_latipes
ENSHCOG00000016164	exosc10	99	78.202	ENSORLG00020013529	exosc10	99	77.640	Oryzias_latipes_hni
ENSHCOG00000016164	exosc10	99	78.202	ENSORLG00015005525	exosc10	99	77.640	Oryzias_latipes_hsok
ENSHCOG00000016164	exosc10	99	76.517	ENSOMEG00000003337	exosc10	99	76.067	Oryzias_melastigma
ENSHCOG00000016164	exosc10	97	57.029	ENSOGAG00000013662	EXOSC10	98	56.852	Otolemur_garnettii
ENSHCOG00000016164	exosc10	98	60.767	ENSOARG00000003668	EXOSC10	98	60.586	Ovis_aries
ENSHCOG00000016164	exosc10	98	60.998	ENSPPAG00000038356	EXOSC10	98	60.815	Pan_paniscus
ENSHCOG00000016164	exosc10	98	60.702	ENSPPRG00000022976	EXOSC10	98	60.431	Panthera_pardus
ENSHCOG00000016164	exosc10	93	61.164	ENSPTIG00000012735	EXOSC10	96	60.880	Panthera_tigris_altaica
ENSHCOG00000016164	exosc10	98	57.955	ENSPTRG00000000140	EXOSC10	98	57.775	Pan_troglodytes
ENSHCOG00000016164	exosc10	98	60.452	ENSPANG00000026088	EXOSC10	98	60.271	Papio_anubis
ENSHCOG00000016164	exosc10	97	66.551	ENSPKIG00000013098	exosc10	95	66.782	Paramormyrops_kingsleyae
ENSHCOG00000016164	exosc10	98	59.705	ENSPSIG00000005078	EXOSC10	97	59.705	Pelodiscus_sinensis
ENSHCOG00000016164	exosc10	66	79.592	ENSPMGG00000022241	exosc10	99	79.592	Periophthalmus_magnuspinnatus
ENSHCOG00000016164	exosc10	77	64.849	ENSPEMG00000007753	Exosc10	97	64.849	Peromyscus_maniculatus_bairdii
ENSHCOG00000016164	exosc10	55	52.024	ENSPMAG00000006909	exosc10	100	52.024	Petromyzon_marinus
ENSHCOG00000016164	exosc10	95	56.410	ENSPCIG00000004840	EXOSC10	92	68.576	Phascolarctos_cinereus
ENSHCOG00000016164	exosc10	99	77.018	ENSPFOG00000004744	exosc10	100	76.570	Poecilia_formosa
ENSHCOG00000016164	exosc10	100	76.708	ENSPLAG00000010253	exosc10	100	76.260	Poecilia_latipinna
ENSHCOG00000016164	exosc10	99	76.794	ENSPMEG00000005740	exosc10	100	76.345	Poecilia_mexicana
ENSHCOG00000016164	exosc10	100	76.596	ENSPREG00000016285	exosc10	100	76.148	Poecilia_reticulata
ENSHCOG00000016164	exosc10	97	61.124	ENSPPYG00000001891	EXOSC10	94	60.939	Pongo_abelii
ENSHCOG00000016164	exosc10	83	62.660	ENSPCAG00000001583	EXOSC10	93	62.660	Procavia_capensis
ENSHCOG00000016164	exosc10	98	61.932	ENSPCOG00000013742	EXOSC10	98	61.748	Propithecus_coquereli
ENSHCOG00000016164	exosc10	97	61.379	ENSPVAG00000014780	EXOSC10	97	61.194	Pteropus_vampyrus
ENSHCOG00000016164	exosc10	98	78.905	ENSPNYG00000007387	exosc10	100	77.803	Pundamilia_nyererei
ENSHCOG00000016164	exosc10	97	65.363	ENSPNAG00000028864	exosc10	98	66.480	Pygocentrus_nattereri
ENSHCOG00000016164	exosc10	98	60.835	ENSRNOG00000010719	Exosc10	98	60.316	Rattus_norvegicus
ENSHCOG00000016164	exosc10	97	54.328	ENSRBIG00000039772	EXOSC10	98	54.152	Rhinopithecus_bieti
ENSHCOG00000016164	exosc10	97	61.092	ENSRROG00000036700	EXOSC10	98	60.909	Rhinopithecus_roxellana
ENSHCOG00000016164	exosc10	60	35.273	YOR001W	-	68	35.273	Saccharomyces_cerevisiae
ENSHCOG00000016164	exosc10	97	56.670	ENSSBOG00000020768	EXOSC10	100	56.542	Saimiri_boliviensis_boliviensis
ENSHCOG00000016164	exosc10	95	60.233	ENSSHAG00000013572	EXOSC10	100	59.837	Sarcophilus_harrisii
ENSHCOG00000016164	exosc10	94	65.955	ENSSFOG00015004512	exosc10	97	65.643	Scleropages_formosus
ENSHCOG00000016164	exosc10	99	79.955	ENSSMAG00000017318	exosc10	99	79.507	Scophthalmus_maximus
ENSHCOG00000016164	exosc10	99	79.484	ENSSDUG00000006646	exosc10	100	79.148	Seriola_dumerili
ENSHCOG00000016164	exosc10	99	79.148	ENSSLDG00000025554	exosc10	100	78.812	Seriola_lalandi_dorsalis
ENSHCOG00000016164	exosc10	77	50.071	ENSSARG00000013171	EXOSC10	100	48.993	Sorex_araneus
ENSHCOG00000016164	exosc10	95	60.349	ENSSPUG00000006844	EXOSC10	95	69.284	Sphenodon_punctatus
ENSHCOG00000016164	exosc10	99	79.260	ENSSPAG00000007053	exosc10	100	78.812	Stegastes_partitus
ENSHCOG00000016164	exosc10	90	60.294	ENSSSCG00000003412	EXOSC10	100	60.098	Sus_scrofa
ENSHCOG00000016164	exosc10	95	59.328	ENSTGUG00000002231	EXOSC10	99	58.906	Taeniopygia_guttata
ENSHCOG00000016164	exosc10	100	72.579	ENSTRUG00000012484	exosc10	99	72.331	Takifugu_rubripes
ENSHCOG00000016164	exosc10	97	77.483	ENSTNIG00000015181	exosc10	99	77.225	Tetraodon_nigroviridis
ENSHCOG00000016164	exosc10	70	71.429	ENSTBEG00000017471	-	70	71.429	Tupaia_belangeri
ENSHCOG00000016164	exosc10	98	60.726	ENSTTRG00000001320	EXOSC10	98	60.499	Tursiops_truncatus
ENSHCOG00000016164	exosc10	93	61.222	ENSUAMG00000014404	EXOSC10	96	61.150	Ursus_americanus
ENSHCOG00000016164	exosc10	98	59.188	ENSUMAG00000023413	EXOSC10	99	63.833	Ursus_maritimus
ENSHCOG00000016164	exosc10	61	71.429	ENSVPAG00000004629	EXOSC10	62	71.429	Vicugna_pacos
ENSHCOG00000016164	exosc10	90	60.710	ENSVVUG00000027116	EXOSC10	100	60.391	Vulpes_vulpes
ENSHCOG00000016164	exosc10	97	54.266	ENSXETG00000006318	exosc10	99	54.266	Xenopus_tropicalis
ENSHCOG00000016164	exosc10	99	75.448	ENSXCOG00000004665	exosc10	100	75.000	Xiphophorus_couchianus
ENSHCOG00000016164	exosc10	100	75.812	ENSXMAG00000011246	exosc10	100	75.364	Xiphophorus_maculatus