EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000016176 (Gene tree)
Gene ID: 109518774
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 16425 bases
Position: chrKV880056.1:742788-759212
Accession: 109518774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000025770	Exo_endo_phos	PF03372.23	5.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000020289	-	1641	XM_019874832	ENSHCOP00000025770	546 (aa)	XP_019730391	-

Gene Model

Click here to download ENSHCOG00000016176's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000016176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000016176	cnot6b	99	67.901	ENSHCOG00000009512	cnot6l	99	67.372

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000016176	cnot6b	100	84.615	ENSG00000113300	CNOT6	100	94.737	Homo_sapiens
ENSHCOG00000016176	cnot6b	100	96.064	ENSAPOG00000009994	cnot6b	100	96.064	Acanthochromis_polyacanthus
ENSHCOG00000016176	cnot6b	100	84.492	ENSAMEG00000000949	CNOT6	99	83.601	Ailuropoda_melanoleuca
ENSHCOG00000016176	cnot6b	100	96.007	ENSACIG00000016566	cnot6b	100	96.007	Amphilophus_citrinellus
ENSHCOG00000016176	cnot6b	100	96.064	ENSAOCG00000006893	cnot6b	100	96.064	Amphiprion_ocellaris
ENSHCOG00000016176	cnot6b	100	96.064	ENSAPEG00000016949	cnot6b	100	96.064	Amphiprion_percula
ENSHCOG00000016176	cnot6b	100	93.202	ENSATEG00000007862	cnot6b	100	93.202	Anabas_testudineus
ENSHCOG00000016176	cnot6b	100	84.973	ENSAPLG00000012715	CNOT6	99	84.436	Anas_platyrhynchos
ENSHCOG00000016176	cnot6b	100	85.152	ENSACAG00000016548	CNOT6	100	84.079	Anolis_carolinensis
ENSHCOG00000016176	cnot6b	100	84.436	ENSANAG00000030436	CNOT6	96	83.542	Aotus_nancymaae
ENSHCOG00000016176	cnot6b	100	94.812	ENSACLG00000008279	cnot6b	100	94.812	Astatotilapia_calliptera
ENSHCOG00000016176	cnot6b	100	89.785	ENSAMXG00000019140	cnot6a	100	89.606	Astyanax_mexicanus
ENSHCOG00000016176	cnot6b	100	87.835	ENSAMXG00000034694	cnot6b	100	86.762	Astyanax_mexicanus
ENSHCOG00000016176	cnot6b	100	84.794	ENSBTAG00000017362	CNOT6	100	83.900	Bos_taurus
ENSHCOG00000016176	cnot6b	100	84.258	ENSCJAG00000009795	CNOT6	100	83.363	Callithrix_jacchus
ENSHCOG00000016176	cnot6b	100	84.794	ENSCAFG00000000464	CNOT6	100	83.900	Canis_familiaris
ENSHCOG00000016176	cnot6b	100	84.794	ENSCAFG00020002441	CNOT6	100	83.900	Canis_lupus_dingo
ENSHCOG00000016176	cnot6b	100	84.436	ENSCHIG00000019100	CNOT6	100	83.542	Capra_hircus
ENSHCOG00000016176	cnot6b	100	83.363	ENSTSYG00000003982	CNOT6	100	82.469	Carlito_syrichta
ENSHCOG00000016176	cnot6b	100	80.143	ENSCPOG00000035657	CNOT6	100	79.249	Cavia_porcellus
ENSHCOG00000016176	cnot6b	100	79.964	ENSCCAG00000033670	CNOT6	100	79.070	Cebus_capucinus
ENSHCOG00000016176	cnot6b	100	84.615	ENSCATG00000042014	CNOT6	100	83.721	Cercocebus_atys
ENSHCOG00000016176	cnot6b	100	83.363	ENSCLAG00000010489	CNOT6	100	82.469	Chinchilla_lanigera
ENSHCOG00000016176	cnot6b	100	84.615	ENSCSAG00000008165	CNOT6	100	83.721	Chlorocebus_sabaeus
ENSHCOG00000016176	cnot6b	100	84.079	ENSCHOG00000009680	CNOT6	100	83.542	Choloepus_hoffmanni
ENSHCOG00000016176	cnot6b	100	85.152	ENSCPBG00000008908	CNOT6	100	84.615	Chrysemys_picta_bellii
ENSHCOG00000016176	cnot6b	100	84.794	ENSCANG00000026756	CNOT6	100	83.900	Colobus_angolensis_palliatus
ENSHCOG00000016176	cnot6b	100	84.296	ENSCGRG00001011452	Cnot6	100	83.394	Cricetulus_griseus_chok1gshd
ENSHCOG00000016176	cnot6b	100	81.038	ENSCGRG00000010407	Cnot6	100	80.143	Cricetulus_griseus_crigri
ENSHCOG00000016176	cnot6b	100	95.170	ENSCSEG00000010939	cnot6b	100	95.170	Cynoglossus_semilaevis
ENSHCOG00000016176	cnot6b	100	93.560	ENSCVAG00000010538	cnot6b	100	93.560	Cyprinodon_variegatus
ENSHCOG00000016176	cnot6b	100	86.225	ENSDARG00000101072	cnot6b	100	86.047	Danio_rerio
ENSHCOG00000016176	cnot6b	100	89.068	ENSDARG00000008255	cnot6a	100	88.889	Danio_rerio
ENSHCOG00000016176	cnot6b	100	84.973	ENSDNOG00000041644	CNOT6	100	84.079	Dasypus_novemcinctus
ENSHCOG00000016176	cnot6b	100	76.029	ENSDORG00000001708	Cnot6	100	75.134	Dipodomys_ordii
ENSHCOG00000016176	cnot6b	100	67.321	ENSETEG00000006975	CNOT6	100	66.429	Echinops_telfairi
ENSHCOG00000016176	cnot6b	90	80.483	ENSEASG00005012957	-	99	79.678	Equus_asinus_asinus
ENSHCOG00000016176	cnot6b	100	84.436	ENSEASG00005012794	-	100	83.542	Equus_asinus_asinus
ENSHCOG00000016176	cnot6b	100	84.973	ENSECAG00000019325	CNOT6	100	84.079	Equus_caballus
ENSHCOG00000016176	cnot6b	100	80.866	ENSECAG00000012704	-	99	79.964	Equus_caballus
ENSHCOG00000016176	cnot6b	100	83.721	ENSEEUG00000015382	CNOT6	100	82.826	Erinaceus_europaeus
ENSHCOG00000016176	cnot6b	100	86.380	ENSELUG00000024580	cnot6a	100	85.842	Esox_lucius
ENSHCOG00000016176	cnot6b	100	87.654	ENSELUG00000015981	cnot6b	99	86.596	Esox_lucius
ENSHCOG00000016176	cnot6b	100	84.973	ENSFCAG00000001881	CNOT6	100	84.079	Felis_catus
ENSHCOG00000016176	cnot6b	100	85.152	ENSFALG00000007699	CNOT6	100	84.615	Ficedula_albicollis
ENSHCOG00000016176	cnot6b	100	82.826	ENSFDAG00000001999	CNOT6	100	81.932	Fukomys_damarensis
ENSHCOG00000016176	cnot6b	69	93.438	ENSFHEG00000013756	cnot6b	99	93.438	Fundulus_heteroclitus
ENSHCOG00000016176	cnot6b	95	92.060	ENSGMOG00000009767	cnot6b	99	92.060	Gadus_morhua
ENSHCOG00000016176	cnot6b	100	84.973	ENSGALG00000034316	CNOT6	100	84.436	Gallus_gallus
ENSHCOG00000016176	cnot6b	100	93.560	ENSGAFG00000008525	cnot6b	100	93.560	Gambusia_affinis
ENSHCOG00000016176	cnot6b	95	92.439	ENSGACG00000018046	cnot6b	99	92.439	Gasterosteus_aculeatus
ENSHCOG00000016176	cnot6b	100	70.000	ENSGAGG00000012176	CNOT6	100	69.464	Gopherus_agassizii
ENSHCOG00000016176	cnot6b	100	84.615	ENSGGOG00000003675	CNOT6	100	83.721	Gorilla_gorilla
ENSHCOG00000016176	cnot6b	100	94.991	ENSHBUG00000002819	cnot6b	100	94.991	Haplochromis_burtoni
ENSHCOG00000016176	cnot6b	100	83.184	ENSHGLG00000017756	CNOT6	100	82.290	Heterocephalus_glaber_female
ENSHCOG00000016176	cnot6b	100	83.184	ENSHGLG00100005747	CNOT6	100	82.290	Heterocephalus_glaber_male
ENSHCOG00000016176	cnot6b	100	89.048	ENSIPUG00000019831	cnot6a	100	89.048	Ictalurus_punctatus
ENSHCOG00000016176	cnot6b	100	88.193	ENSIPUG00000017482	cnot6b	100	87.299	Ictalurus_punctatus
ENSHCOG00000016176	cnot6b	100	84.258	ENSSTOG00000002803	CNOT6	100	83.363	Ictidomys_tridecemlineatus
ENSHCOG00000016176	cnot6b	100	84.079	ENSJJAG00000012296	Cnot6	100	83.184	Jaculus_jaculus
ENSHCOG00000016176	cnot6b	100	93.202	ENSKMAG00000004640	cnot6b	100	93.202	Kryptolebias_marmoratus
ENSHCOG00000016176	cnot6b	100	95.349	ENSLBEG00000027917	cnot6b	100	95.349	Labrus_bergylta
ENSHCOG00000016176	cnot6b	100	91.771	ENSLOCG00000010102	cnot6b	99	91.055	Lepisosteus_oculatus
ENSHCOG00000016176	cnot6b	100	85.331	ENSLAFG00000016742	CNOT6	100	84.436	Loxodonta_africana
ENSHCOG00000016176	cnot6b	100	84.615	ENSMFAG00000030867	CNOT6	100	83.721	Macaca_fascicularis
ENSHCOG00000016176	cnot6b	100	84.615	ENSMMUG00000018690	CNOT6	100	83.721	Macaca_mulatta
ENSHCOG00000016176	cnot6b	100	84.615	ENSMNEG00000038565	CNOT6	100	83.721	Macaca_nemestrina
ENSHCOG00000016176	cnot6b	100	84.615	ENSMLEG00000010555	CNOT6	100	83.721	Mandrillus_leucophaeus
ENSHCOG00000016176	cnot6b	100	96.243	ENSMAMG00000007515	cnot6b	100	96.243	Mastacembelus_armatus
ENSHCOG00000016176	cnot6b	100	94.812	ENSMZEG00005012899	cnot6b	100	94.812	Maylandia_zebra
ENSHCOG00000016176	cnot6b	100	83.721	ENSMAUG00000019798	Cnot6	100	82.826	Mesocricetus_auratus
ENSHCOG00000016176	cnot6b	100	82.826	ENSMICG00000013018	-	100	81.932	Microcebus_murinus
ENSHCOG00000016176	cnot6b	98	77.037	ENSMICG00000028378	-	99	76.111	Microcebus_murinus
ENSHCOG00000016176	cnot6b	100	83.721	ENSMOCG00000021662	Cnot6	100	82.826	Microtus_ochrogaster
ENSHCOG00000016176	cnot6b	100	95.788	ENSMMOG00000003227	cnot6b	100	95.238	Mola_mola
ENSHCOG00000016176	cnot6b	100	84.794	ENSMODG00000003979	CNOT6	100	84.258	Monodelphis_domestica
ENSHCOG00000016176	cnot6b	100	95.886	ENSMALG00000014251	cnot6b	100	95.886	Monopterus_albus
ENSHCOG00000016176	cnot6b	100	84.477	MGP_CAROLIEiJ_G0016277	Cnot6	100	83.574	Mus_caroli
ENSHCOG00000016176	cnot6b	100	84.477	ENSMUSG00000020362	Cnot6	100	83.574	Mus_musculus
ENSHCOG00000016176	cnot6b	100	84.477	MGP_PahariEiJ_G0017413	Cnot6	100	83.574	Mus_pahari
ENSHCOG00000016176	cnot6b	100	84.296	MGP_SPRETEiJ_G0017122	Cnot6	100	83.394	Mus_spretus
ENSHCOG00000016176	cnot6b	100	85.152	ENSMPUG00000000587	CNOT6	96	84.258	Mustela_putorius_furo
ENSHCOG00000016176	cnot6b	100	83.333	ENSMLUG00000010257	CNOT6	100	82.447	Myotis_lucifugus
ENSHCOG00000016176	cnot6b	100	82.826	ENSNGAG00000008269	Cnot6	100	82.290	Nannospalax_galili
ENSHCOG00000016176	cnot6b	100	94.991	ENSNBRG00000010798	cnot6b	100	94.991	Neolamprologus_brichardi
ENSHCOG00000016176	cnot6b	100	84.838	ENSNLEG00000002322	CNOT6	100	83.935	Nomascus_leucogenys
ENSHCOG00000016176	cnot6b	81	83.886	ENSMEUG00000000025	CNOT6	80	82.464	Notamacropus_eugenii
ENSHCOG00000016176	cnot6b	88	84.286	ENSOPRG00000008244	-	88	84.286	Ochotona_princeps
ENSHCOG00000016176	cnot6b	100	82.826	ENSODEG00000007041	CNOT6	100	81.753	Octodon_degus
ENSHCOG00000016176	cnot6b	75	93.617	ENSONIG00000013027	cnot6b	99	93.617	Oreochromis_niloticus
ENSHCOG00000016176	cnot6b	100	84.615	ENSOANG00000010226	CNOT6	100	83.721	Ornithorhynchus_anatinus
ENSHCOG00000016176	cnot6b	100	83.601	ENSOCUG00000011083	CNOT6	100	82.709	Oryctolagus_cuniculus
ENSHCOG00000016176	cnot6b	100	94.454	ENSORLG00000005059	cnot6b	100	94.454	Oryzias_latipes
ENSHCOG00000016176	cnot6b	100	94.454	ENSORLG00020012784	cnot6b	100	94.454	Oryzias_latipes_hni
ENSHCOG00000016176	cnot6b	93	93.881	ENSORLG00015022658	cnot6b	98	93.881	Oryzias_latipes_hsok
ENSHCOG00000016176	cnot6b	100	94.991	ENSOMEG00000005295	cnot6b	100	94.991	Oryzias_melastigma
ENSHCOG00000016176	cnot6b	94	83.460	ENSOGAG00000032470	CNOT6	100	82.510	Otolemur_garnettii
ENSHCOG00000016176	cnot6b	97	83.824	ENSOARG00000001003	CNOT6	100	82.904	Ovis_aries
ENSHCOG00000016176	cnot6b	100	84.615	ENSPPAG00000032253	CNOT6	100	83.721	Pan_paniscus
ENSHCOG00000016176	cnot6b	100	84.973	ENSPPRG00000011912	CNOT6	100	84.079	Panthera_pardus
ENSHCOG00000016176	cnot6b	100	84.973	ENSPTIG00000016794	CNOT6	100	84.079	Panthera_tigris_altaica
ENSHCOG00000016176	cnot6b	100	85.199	ENSPTRG00000017636	CNOT6	100	84.296	Pan_troglodytes
ENSHCOG00000016176	cnot6b	100	84.615	ENSPANG00000016191	CNOT6	100	83.721	Papio_anubis
ENSHCOG00000016176	cnot6b	100	88.909	ENSPKIG00000021368	cnot6b	100	88.193	Paramormyrops_kingsleyae
ENSHCOG00000016176	cnot6b	98	84.982	ENSPSIG00000017307	CNOT6	100	84.432	Pelodiscus_sinensis
ENSHCOG00000016176	cnot6b	100	96.552	ENSPMGG00000011238	cnot6b	100	96.552	Periophthalmus_magnuspinnatus
ENSHCOG00000016176	cnot6b	100	83.005	ENSPEMG00000000627	Cnot6	100	82.469	Peromyscus_maniculatus_bairdii
ENSHCOG00000016176	cnot6b	100	84.794	ENSPCIG00000020319	CNOT6	99	84.258	Phascolarctos_cinereus
ENSHCOG00000016176	cnot6b	100	94.086	ENSPFOG00000006291	cnot6b	100	93.918	Poecilia_formosa
ENSHCOG00000016176	cnot6b	100	92.196	ENSPLAG00000008266	cnot6b	100	92.196	Poecilia_latipinna
ENSHCOG00000016176	cnot6b	100	94.097	ENSPMEG00000009091	cnot6b	100	94.097	Poecilia_mexicana
ENSHCOG00000016176	cnot6b	100	94.918	ENSPREG00000003713	cnot6b	100	94.918	Poecilia_reticulata
ENSHCOG00000016176	cnot6b	100	84.615	ENSPPYG00000016137	CNOT6	100	83.721	Pongo_abelii
ENSHCOG00000016176	cnot6b	72	83.582	ENSPCAG00000005599	-	71	81.716	Procavia_capensis
ENSHCOG00000016176	cnot6b	100	78.712	ENSPCOG00000017359	CNOT6	100	78.533	Propithecus_coquereli
ENSHCOG00000016176	cnot6b	100	81.395	ENSPVAG00000003069	CNOT6	100	80.501	Pteropus_vampyrus
ENSHCOG00000016176	cnot6b	100	94.633	ENSPNYG00000000321	cnot6b	100	94.633	Pundamilia_nyererei
ENSHCOG00000016176	cnot6b	100	90.143	ENSPNAG00000029586	cnot6a	100	89.964	Pygocentrus_nattereri
ENSHCOG00000016176	cnot6b	100	88.193	ENSPNAG00000028816	cnot6b	100	87.299	Pygocentrus_nattereri
ENSHCOG00000016176	cnot6b	100	83.005	ENSRNOG00000054891	Cnot6	100	82.111	Rattus_norvegicus
ENSHCOG00000016176	cnot6b	100	84.615	ENSRBIG00000004309	CNOT6	100	83.721	Rhinopithecus_bieti
ENSHCOG00000016176	cnot6b	100	84.615	ENSRROG00000035378	CNOT6	100	83.721	Rhinopithecus_roxellana
ENSHCOG00000016176	cnot6b	100	84.615	ENSSBOG00000030494	CNOT6	100	83.900	Saimiri_boliviensis_boliviensis
ENSHCOG00000016176	cnot6b	100	84.794	ENSSHAG00000017436	CNOT6	100	84.258	Sarcophilus_harrisii
ENSHCOG00000016176	cnot6b	100	91.055	ENSSFOG00015015133	CNOT6	100	90.519	Scleropages_formosus
ENSHCOG00000016176	cnot6b	100	89.267	ENSSFOG00015022383	cnot6a	96	88.372	Scleropages_formosus
ENSHCOG00000016176	cnot6b	100	94.812	ENSSMAG00000003084	cnot6b	100	94.812	Scophthalmus_maximus
ENSHCOG00000016176	cnot6b	100	96.243	ENSSDUG00000004151	cnot6b	100	96.243	Seriola_dumerili
ENSHCOG00000016176	cnot6b	100	96.422	ENSSLDG00000004448	cnot6b	100	96.422	Seriola_lalandi_dorsalis
ENSHCOG00000016176	cnot6b	63	66.295	ENSSARG00000012650	-	100	66.295	Sorex_araneus
ENSHCOG00000016176	cnot6b	100	84.794	ENSSPUG00000007893	CNOT6	100	84.258	Sphenodon_punctatus
ENSHCOG00000016176	cnot6b	100	96.243	ENSSPAG00000000149	cnot6b	100	96.243	Stegastes_partitus
ENSHCOG00000016176	cnot6b	100	85.199	ENSSSCG00000014009	CNOT6	100	84.296	Sus_scrofa
ENSHCOG00000016176	cnot6b	100	84.946	ENSTGUG00000001119	CNOT6	100	84.409	Taeniopygia_guttata
ENSHCOG00000016176	cnot6b	100	90.877	ENSTRUG00000002818	cnot6b	100	90.340	Takifugu_rubripes
ENSHCOG00000016176	cnot6b	100	91.771	ENSTNIG00000004443	cnot6b	99	91.234	Tetraodon_nigroviridis
ENSHCOG00000016176	cnot6b	66	88.281	ENSTBEG00000017094	-	75	88.281	Tupaia_belangeri
ENSHCOG00000016176	cnot6b	100	84.436	ENSTTRG00000009363	CNOT6	100	83.542	Tursiops_truncatus
ENSHCOG00000016176	cnot6b	90	73.810	ENSUAMG00000004579	CNOT6	99	72.817	Ursus_americanus
ENSHCOG00000016176	cnot6b	100	80.887	ENSUMAG00000024577	CNOT6	100	80.034	Ursus_maritimus
ENSHCOG00000016176	cnot6b	83	91.892	ENSVPAG00000003593	CNOT6	83	91.892	Vicugna_pacos
ENSHCOG00000016176	cnot6b	100	84.794	ENSVVUG00000026940	CNOT6	100	83.900	Vulpes_vulpes
ENSHCOG00000016176	cnot6b	100	92.559	ENSXCOG00000003360	cnot6b	100	92.559	Xiphophorus_couchianus
ENSHCOG00000016176	cnot6b	100	94.097	ENSXMAG00000008730	cnot6b	100	94.097	Xiphophorus_maculatus