EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000016203 (Gene tree)
Gene ID: 109506945
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6144 bases
Position: chrKV880472.1:565544-571687
Accession: 109506945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000013095	DUF382	PF04037.13	1.6e-58	1	1
ENSHCOP00000013095	SAP	PF02037.27	2.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000020356	-	2699	XM_019855994	ENSHCOP00000013095	846 (aa)	XP_019711553	UPI00094EFFD4

Gene Model

Click here to download ENSHCOG00000016203's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000016203's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000016203	sf3b2	87	71.056	ENSG00000087365	SF3B2	99	86.751	Homo_sapiens
ENSHCOG00000016203	sf3b2	97	79.064	ENSAPOG00000001974	sf3b2	96	79.930	Acanthochromis_polyacanthus
ENSHCOG00000016203	sf3b2	97	64.865	ENSAMEG00000017206	SF3B2	97	65.798	Ailuropoda_melanoleuca
ENSHCOG00000016203	sf3b2	100	75.593	ENSACIG00000000624	sf3b2	100	76.212	Amphilophus_citrinellus
ENSHCOG00000016203	sf3b2	100	79.932	ENSAOCG00000009207	sf3b2	100	81.115	Amphiprion_ocellaris
ENSHCOG00000016203	sf3b2	100	80.251	ENSAPEG00000002762	sf3b2	100	79.019	Amphiprion_percula
ENSHCOG00000016203	sf3b2	97	55.141	ENSACAG00000008615	SF3B2	99	54.084	Anolis_carolinensis
ENSHCOG00000016203	sf3b2	87	70.926	ENSANAG00000029120	SF3B2	97	65.795	Aotus_nancymaae
ENSHCOG00000016203	sf3b2	100	79.556	ENSACLG00000014771	sf3b2	100	79.791	Astatotilapia_calliptera
ENSHCOG00000016203	sf3b2	100	72.564	ENSAMXG00000007929	sf3b2	100	73.103	Astyanax_mexicanus
ENSHCOG00000016203	sf3b2	97	66.251	ENSBTAG00000002778	SF3B2	97	66.667	Bos_taurus
ENSHCOG00000016203	sf3b2	65	48.596	WBGene00021004	sftb-2	92	48.596	Caenorhabditis_elegans
ENSHCOG00000016203	sf3b2	87	71.056	ENSCJAG00000001656	SF3B2	97	65.909	Callithrix_jacchus
ENSHCOG00000016203	sf3b2	97	65.011	ENSCAFG00000013033	SF3B2	97	66.175	Canis_familiaris
ENSHCOG00000016203	sf3b2	97	65.011	ENSCAFG00020015382	SF3B2	97	66.175	Canis_lupus_dingo
ENSHCOG00000016203	sf3b2	97	64.439	ENSCHIG00000011211	SF3B2	97	66.629	Capra_hircus
ENSHCOG00000016203	sf3b2	97	65.653	ENSTSYG00000000959	SF3B2	97	66.025	Carlito_syrichta
ENSHCOG00000016203	sf3b2	87	63.005	ENSCPOG00000008294	SF3B2	97	63.211	Cavia_porcellus
ENSHCOG00000016203	sf3b2	87	71.056	ENSCCAG00000035256	SF3B2	97	65.909	Cebus_capucinus
ENSHCOG00000016203	sf3b2	87	71.056	ENSCATG00000042240	SF3B2	97	66.009	Cercocebus_atys
ENSHCOG00000016203	sf3b2	97	65.222	ENSCLAG00000016852	SF3B2	97	65.411	Chinchilla_lanigera
ENSHCOG00000016203	sf3b2	87	71.056	ENSCSAG00000008121	SF3B2	97	65.795	Chlorocebus_sabaeus
ENSHCOG00000016203	sf3b2	88	80.612	ENSCHOG00000001476	SF3B2	90	80.102	Choloepus_hoffmanni
ENSHCOG00000016203	sf3b2	98	63.494	ENSCPBG00000022465	SF3B2	87	77.813	Chrysemys_picta_bellii
ENSHCOG00000016203	sf3b2	76	59.690	ENSCING00000005665	-	100	59.070	Ciona_intestinalis
ENSHCOG00000016203	sf3b2	62	67.045	ENSCSAVG00000002029	-	84	67.045	Ciona_savignyi
ENSHCOG00000016203	sf3b2	87	71.056	ENSCANG00000039680	SF3B2	97	65.795	Colobus_angolensis_palliatus
ENSHCOG00000016203	sf3b2	97	63.105	ENSCGRG00001015741	Sf3b2	97	65.385	Cricetulus_griseus_chok1gshd
ENSHCOG00000016203	sf3b2	97	63.105	ENSCGRG00000018110	Sf3b2	97	66.282	Cricetulus_griseus_crigri
ENSHCOG00000016203	sf3b2	100	73.113	ENSCSEG00000000230	sf3b2	100	74.501	Cynoglossus_semilaevis
ENSHCOG00000016203	sf3b2	100	76.256	ENSCVAG00000003357	sf3b2	100	75.941	Cyprinodon_variegatus
ENSHCOG00000016203	sf3b2	97	71.243	ENSDARG00000018049	sf3b2	99	71.631	Danio_rerio
ENSHCOG00000016203	sf3b2	83	72.928	ENSDNOG00000009484	SF3B2	96	68.883	Dasypus_novemcinctus
ENSHCOG00000016203	sf3b2	97	65.074	ENSDORG00000002495	Sf3b2	97	65.870	Dipodomys_ordii
ENSHCOG00000016203	sf3b2	72	79.032	ENSETEG00000020284	SF3B2	82	78.089	Echinops_telfairi
ENSHCOG00000016203	sf3b2	99	55.411	ENSEBUG00000013703	sf3b2	99	56.385	Eptatretus_burgeri
ENSHCOG00000016203	sf3b2	97	65.721	ENSEASG00005004508	SF3B2	97	65.948	Equus_asinus_asinus
ENSHCOG00000016203	sf3b2	97	65.721	ENSECAG00000024461	SF3B2	97	65.948	Equus_caballus
ENSHCOG00000016203	sf3b2	59	83.193	ENSEEUG00000014278	-	58	83.193	Erinaceus_europaeus
ENSHCOG00000016203	sf3b2	100	72.817	ENSELUG00000005586	sf3b2	100	73.420	Esox_lucius
ENSHCOG00000016203	sf3b2	97	65.011	ENSFCAG00000013289	SF3B2	97	65.948	Felis_catus
ENSHCOG00000016203	sf3b2	77	66.972	ENSFALG00000014653	SF3B2	92	67.593	Ficedula_albicollis
ENSHCOG00000016203	sf3b2	97	65.359	ENSFDAG00000019806	SF3B2	97	66.180	Fukomys_damarensis
ENSHCOG00000016203	sf3b2	100	75.538	ENSFHEG00000020968	sf3b2	100	75.538	Fundulus_heteroclitus
ENSHCOG00000016203	sf3b2	77	83.460	ENSGMOG00000012131	sf3b2	100	82.701	Gadus_morhua
ENSHCOG00000016203	sf3b2	100	76.190	ENSGAFG00000001675	sf3b2	100	76.131	Gambusia_affinis
ENSHCOG00000016203	sf3b2	77	84.067	ENSGACG00000019012	sf3b2	100	84.091	Gasterosteus_aculeatus
ENSHCOG00000016203	sf3b2	98	65.708	ENSGAGG00000023916	SF3B2	98	66.782	Gopherus_agassizii
ENSHCOG00000016203	sf3b2	79	87.606	ENSGGOG00000028448	SF3B2	97	86.761	Gorilla_gorilla
ENSHCOG00000016203	sf3b2	100	79.673	ENSHBUG00000017349	sf3b2	100	80.023	Haplochromis_burtoni
ENSHCOG00000016203	sf3b2	97	64.286	ENSHGLG00000010807	SF3B2	97	65.525	Heterocephalus_glaber_female
ENSHCOG00000016203	sf3b2	97	65.834	ENSHGLG00100006361	SF3B2	97	66.023	Heterocephalus_glaber_male
ENSHCOG00000016203	sf3b2	100	71.188	ENSIPUG00000009383	sf3b2	100	71.620	Ictalurus_punctatus
ENSHCOG00000016203	sf3b2	97	65.724	ENSSTOG00000028892	SF3B2	97	66.138	Ictidomys_tridecemlineatus
ENSHCOG00000016203	sf3b2	74	78.268	ENSJJAG00000018193	Sf3b2	97	65.685	Jaculus_jaculus
ENSHCOG00000016203	sf3b2	62	92.264	ENSKMAG00000020181	sf3b2	100	75.395	Kryptolebias_marmoratus
ENSHCOG00000016203	sf3b2	100	80.091	ENSLBEG00000027739	sf3b2	100	80.931	Labrus_bergylta
ENSHCOG00000016203	sf3b2	83	79.747	ENSLACG00000010429	SF3B2	100	64.648	Latimeria_chalumnae
ENSHCOG00000016203	sf3b2	83	72.652	ENSLAFG00000002128	SF3B2	97	65.831	Loxodonta_africana
ENSHCOG00000016203	sf3b2	87	70.964	ENSMFAG00000003064	SF3B2	97	65.933	Macaca_fascicularis
ENSHCOG00000016203	sf3b2	97	61.382	ENSMMUG00000011743	SF3B2	97	62.372	Macaca_mulatta
ENSHCOG00000016203	sf3b2	87	71.184	ENSMNEG00000034437	SF3B2	97	66.009	Macaca_nemestrina
ENSHCOG00000016203	sf3b2	87	71.056	ENSMLEG00000029373	SF3B2	97	66.009	Mandrillus_leucophaeus
ENSHCOG00000016203	sf3b2	100	79.025	ENSMAMG00000014103	sf3b2	100	79.638	Mastacembelus_armatus
ENSHCOG00000016203	sf3b2	100	79.496	ENSMZEG00005020789	sf3b2	100	79.657	Maylandia_zebra
ENSHCOG00000016203	sf3b2	50	86.464	ENSMAUG00000017040	Sf3b2	93	85.635	Mesocricetus_auratus
ENSHCOG00000016203	sf3b2	97	65.653	ENSMICG00000008565	-	97	66.025	Microcebus_murinus
ENSHCOG00000016203	sf3b2	97	66.315	ENSMICG00000016942	-	97	66.549	Microcebus_murinus
ENSHCOG00000016203	sf3b2	97	64.253	ENSMOCG00000003136	Sf3b2	97	65.498	Microtus_ochrogaster
ENSHCOG00000016203	sf3b2	100	75.517	ENSMMOG00000012928	sf3b2	100	76.261	Mola_mola
ENSHCOG00000016203	sf3b2	74	73.858	ENSMODG00000025020	-	99	71.674	Monodelphis_domestica
ENSHCOG00000016203	sf3b2	74	78.750	ENSMODG00000008490	-	95	69.689	Monodelphis_domestica
ENSHCOG00000016203	sf3b2	100	75.624	ENSMALG00000015137	sf3b2	100	76.271	Monopterus_albus
ENSHCOG00000016203	sf3b2	97	64.853	MGP_CAROLIEiJ_G0022539	Sf3b2	97	65.459	Mus_caroli
ENSHCOG00000016203	sf3b2	97	63.851	ENSMUSG00000024853	Sf3b2	97	65.498	Mus_musculus
ENSHCOG00000016203	sf3b2	97	62.992	MGP_PahariEiJ_G0014036	Sf3b2	97	65.198	Mus_pahari
ENSHCOG00000016203	sf3b2	97	63.964	MGP_SPRETEiJ_G0023453	Sf3b2	97	65.385	Mus_spretus
ENSHCOG00000016203	sf3b2	97	65.760	ENSMPUG00000011349	SF3B2	97	66.175	Mustela_putorius_furo
ENSHCOG00000016203	sf3b2	97	65.090	ENSMLUG00000011136	SF3B2	97	64.302	Myotis_lucifugus
ENSHCOG00000016203	sf3b2	97	64.077	ENSNGAG00000012103	Sf3b2	97	65.533	Nannospalax_galili
ENSHCOG00000016203	sf3b2	97	62.108	ENSNLEG00000006007	SF3B2	97	62.698	Nomascus_leucogenys
ENSHCOG00000016203	sf3b2	86	82.203	ENSMEUG00000000019	SF3B2	91	81.356	Notamacropus_eugenii
ENSHCOG00000016203	sf3b2	97	62.057	ENSODEG00000017764	SF3B2	97	62.215	Octodon_degus
ENSHCOG00000016203	sf3b2	100	77.778	ENSONIG00000013068	sf3b2	100	78.733	Oreochromis_niloticus
ENSHCOG00000016203	sf3b2	87	65.670	ENSOANG00000012482	SF3B2	96	66.148	Ornithorhynchus_anatinus
ENSHCOG00000016203	sf3b2	64	45.586	ENSOCUG00000024154	-	100	45.471	Oryctolagus_cuniculus
ENSHCOG00000016203	sf3b2	97	66.667	ENSOCUG00000015722	-	97	65.349	Oryctolagus_cuniculus
ENSHCOG00000016203	sf3b2	100	77.881	ENSORLG00000008235	sf3b2	97	78.231	Oryzias_latipes
ENSHCOG00000016203	sf3b2	100	77.881	ENSORLG00020005357	sf3b2	100	78.231	Oryzias_latipes_hni
ENSHCOG00000016203	sf3b2	100	77.998	ENSORLG00015022454	sf3b2	95	72.890	Oryzias_latipes_hsok
ENSHCOG00000016203	sf3b2	100	79.064	ENSOMEG00000017480	sf3b2	100	79.419	Oryzias_melastigma
ENSHCOG00000016203	sf3b2	97	63.217	ENSOGAG00000005799	SF3B2	97	63.451	Otolemur_garnettii
ENSHCOG00000016203	sf3b2	97	64.245	ENSOARG00000002125	SF3B2	100	72.617	Ovis_aries
ENSHCOG00000016203	sf3b2	97	64.779	ENSPPAG00000007359	SF3B2	97	65.795	Pan_paniscus
ENSHCOG00000016203	sf3b2	97	65.011	ENSPPRG00000013334	SF3B2	97	65.948	Panthera_pardus
ENSHCOG00000016203	sf3b2	97	65.011	ENSPTIG00000015022	SF3B2	97	65.948	Panthera_tigris_altaica
ENSHCOG00000016203	sf3b2	97	64.779	ENSPTRG00000003912	SF3B2	97	65.795	Pan_troglodytes
ENSHCOG00000016203	sf3b2	87	71.056	ENSPANG00000008593	SF3B2	97	66.009	Papio_anubis
ENSHCOG00000016203	sf3b2	100	72.849	ENSPKIG00000016576	sf3b2	100	73.903	Paramormyrops_kingsleyae
ENSHCOG00000016203	sf3b2	87	70.844	ENSPSIG00000003158	SF3B2	90	83.273	Pelodiscus_sinensis
ENSHCOG00000016203	sf3b2	100	70.242	ENSPMGG00000000819	sf3b2	100	71.461	Periophthalmus_magnuspinnatus
ENSHCOG00000016203	sf3b2	97	63.739	ENSPEMG00000015437	Sf3b2	97	65.385	Peromyscus_maniculatus_bairdii
ENSHCOG00000016203	sf3b2	88	63.768	ENSPEMG00000015451	-	94	63.325	Peromyscus_maniculatus_bairdii
ENSHCOG00000016203	sf3b2	97	64.334	ENSPCIG00000008381	SF3B2	99	65.783	Phascolarctos_cinereus
ENSHCOG00000016203	sf3b2	100	76.163	ENSPFOG00000002552	sf3b2	100	75.878	Poecilia_formosa
ENSHCOG00000016203	sf3b2	100	76.617	ENSPLAG00000001471	sf3b2	100	76.331	Poecilia_latipinna
ENSHCOG00000016203	sf3b2	100	76.136	ENSPMEG00000013180	sf3b2	100	75.850	Poecilia_mexicana
ENSHCOG00000016203	sf3b2	100	75.482	ENSPREG00000002665	sf3b2	100	75.991	Poecilia_reticulata
ENSHCOG00000016203	sf3b2	59	64.839	ENSPPYG00000003034	-	94	59.346	Pongo_abelii
ENSHCOG00000016203	sf3b2	97	65.912	ENSPCAG00000005129	SF3B2	97	66.478	Procavia_capensis
ENSHCOG00000016203	sf3b2	97	65.494	ENSPCOG00000025375	SF3B2	97	65.948	Propithecus_coquereli
ENSHCOG00000016203	sf3b2	56	92.105	ENSPVAG00000005466	-	84	92.105	Pteropus_vampyrus
ENSHCOG00000016203	sf3b2	90	79.916	ENSPNYG00000023594	sf3b2	100	81.066	Pundamilia_nyererei
ENSHCOG00000016203	sf3b2	100	73.490	ENSPNAG00000001891	sf3b2	100	74.776	Pygocentrus_nattereri
ENSHCOG00000016203	sf3b2	83	69.714	ENSRNOG00000020412	Sf3b2	97	65.158	Rattus_norvegicus
ENSHCOG00000016203	sf3b2	87	71.056	ENSRBIG00000034065	SF3B2	97	65.795	Rhinopithecus_bieti
ENSHCOG00000016203	sf3b2	87	71.056	ENSRROG00000034496	SF3B2	97	65.795	Rhinopithecus_roxellana
ENSHCOG00000016203	sf3b2	99	64.182	ENSSBOG00000026337	SF3B2	97	66.283	Saimiri_boliviensis_boliviensis
ENSHCOG00000016203	sf3b2	96	56.471	ENSSHAG00000018043	-	100	57.562	Sarcophilus_harrisii
ENSHCOG00000016203	sf3b2	74	75.981	ENSSHAG00000010933	-	97	63.164	Sarcophilus_harrisii
ENSHCOG00000016203	sf3b2	100	72.098	ENSSFOG00015021125	sf3b2	100	73.107	Scleropages_formosus
ENSHCOG00000016203	sf3b2	100	78.241	ENSSMAG00000004079	sf3b2	100	77.523	Scophthalmus_maximus
ENSHCOG00000016203	sf3b2	62	93.690	ENSSLDG00000006838	sf3b2	100	80.471	Seriola_lalandi_dorsalis
ENSHCOG00000016203	sf3b2	74	80.096	ENSSPUG00000009198	SF3B2	98	66.591	Sphenodon_punctatus
ENSHCOG00000016203	sf3b2	100	78.420	ENSSPAG00000004406	sf3b2	100	79.023	Stegastes_partitus
ENSHCOG00000016203	sf3b2	97	65.459	ENSSSCG00000012957	SF3B2	97	66.025	Sus_scrofa
ENSHCOG00000016203	sf3b2	100	63.837	ENSTRUG00000007611	sf3b2	99	70.142	Takifugu_rubripes
ENSHCOG00000016203	sf3b2	97	74.912	ENSTNIG00000007441	sf3b2	100	73.918	Tetraodon_nigroviridis
ENSHCOG00000016203	sf3b2	73	85.106	ENSTBEG00000004258	SF3B2	79	85.106	Tupaia_belangeri
ENSHCOG00000016203	sf3b2	97	65.912	ENSTTRG00000014339	SF3B2	97	64.189	Tursiops_truncatus
ENSHCOG00000016203	sf3b2	95	64.311	ENSUAMG00000020754	SF3B2	97	63.210	Ursus_americanus
ENSHCOG00000016203	sf3b2	97	65.011	ENSUMAG00000010994	SF3B2	97	65.948	Ursus_maritimus
ENSHCOG00000016203	sf3b2	60	82.353	ENSVPAG00000008695	SF3B2	66	82.353	Vicugna_pacos
ENSHCOG00000016203	sf3b2	97	64.334	ENSVVUG00000027029	SF3B2	97	64.374	Vulpes_vulpes
ENSHCOG00000016203	sf3b2	86	66.934	ENSXETG00000008422	sf3b2	99	65.223	Xenopus_tropicalis
ENSHCOG00000016203	sf3b2	89	74.700	ENSXCOG00000008943	sf3b2	96	71.851	Xiphophorus_couchianus
ENSHCOG00000016203	sf3b2	100	75.847	ENSXMAG00000008467	sf3b2	100	75.676	Xiphophorus_maculatus