EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000016419 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1
Alias: a2bp1|zgc:103635
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 109726 bases
Position: chrKV879778.1:528536-638261
Accession: ZDB-GENE-040927-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000013272	Fox-1_C	PF12414.8	1.2e-28	1	1
ENSHCOP00000013272	RRM_1	PF00076.22	1.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027244	-	1035	-	ENSHCOP00000013272	344 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000016419's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000016419's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000016419	rbfox1	64	66.667	ENSHCOG00000016102	rbfox2	70	55.786
ENSHCOG00000016419	rbfox1	90	61.180	ENSHCOG00000007444	RBFOX3	80	61.801
ENSHCOG00000016419	rbfox1	92	62.461	ENSHCOG00000001863	RBFOX3	93	62.461
ENSHCOG00000016419	rbfox1	63	65.957	ENSHCOG00000020771	rbfox1l	62	66.809
ENSHCOG00000016419	rbfox1	88	53.846	ENSHCOG00000005662	-	70	55.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000016419	rbfox1	91	76.562	ENSG00000078328	RBFOX1	88	73.988	Homo_sapiens
ENSHCOG00000016419	rbfox1	91	85.196	ENSAPOG00000003197	rbfox1	84	84.894	Acanthochromis_polyacanthus
ENSHCOG00000016419	rbfox1	61	76.777	ENSAMEG00000008605	RBFOX1	82	76.777	Ailuropoda_melanoleuca
ENSHCOG00000016419	rbfox1	81	66.038	ENSACIG00000005478	rbfox1	79	65.421	Amphilophus_citrinellus
ENSHCOG00000016419	rbfox1	75	86.667	ENSAOCG00000008283	rbfox1	91	86.296	Amphiprion_ocellaris
ENSHCOG00000016419	rbfox1	96	69.188	ENSAPEG00000010636	rbfox1	94	70.056	Amphiprion_percula
ENSHCOG00000016419	rbfox1	75	84.191	ENSATEG00000007513	rbfox1	91	85.294	Anabas_testudineus
ENSHCOG00000016419	rbfox1	91	70.201	ENSAPLG00000013263	RBFOX1	84	70.317	Anas_platyrhynchos
ENSHCOG00000016419	rbfox1	91	67.614	ENSACAG00000004013	RBFOX1	85	67.714	Anolis_carolinensis
ENSHCOG00000016419	rbfox1	91	77.188	ENSANAG00000029527	RBFOX1	83	77.188	Aotus_nancymaae
ENSHCOG00000016419	rbfox1	61	78.673	ENSAMXG00000002431	rbfox1	60	78.673	Astyanax_mexicanus
ENSHCOG00000016419	rbfox1	91	70.402	ENSBTAG00000007210	RBFOX1	85	70.402	Bos_taurus
ENSHCOG00000016419	rbfox1	91	77.570	ENSCJAG00000017351	RBFOX1	80	77.570	Callithrix_jacchus
ENSHCOG00000016419	rbfox1	91	70.977	ENSCAFG00000019082	RBFOX1	81	70.977	Canis_familiaris
ENSHCOG00000016419	rbfox1	69	69.549	ENSCAFG00020024881	RBFOX1	72	69.549	Canis_lupus_dingo
ENSHCOG00000016419	rbfox1	91	70.115	ENSCHIG00000023549	RBFOX1	85	70.115	Capra_hircus
ENSHCOG00000016419	rbfox1	91	76.875	ENSTSYG00000005334	RBFOX1	86	76.875	Carlito_syrichta
ENSHCOG00000016419	rbfox1	91	70.977	ENSCAPG00000017669	RBFOX1	87	70.893	Cavia_aperea
ENSHCOG00000016419	rbfox1	91	70.977	ENSCPOG00000011314	RBFOX1	86	70.893	Cavia_porcellus
ENSHCOG00000016419	rbfox1	91	77.188	ENSCCAG00000023031	RBFOX1	83	77.188	Cebus_capucinus
ENSHCOG00000016419	rbfox1	91	76.562	ENSCATG00000033816	RBFOX1	83	76.562	Cercocebus_atys
ENSHCOG00000016419	rbfox1	91	70.690	ENSCLAG00000012761	RBFOX1	85	70.605	Chinchilla_lanigera
ENSHCOG00000016419	rbfox1	86	68.389	ENSCSAG00000008739	RBFOX1	85	68.389	Chlorocebus_sabaeus
ENSHCOG00000016419	rbfox1	91	76.562	ENSCPBG00000026626	RBFOX1	94	63.562	Chrysemys_picta_bellii
ENSHCOG00000016419	rbfox1	91	76.562	ENSCANG00000033125	RBFOX1	83	76.562	Colobus_angolensis_palliatus
ENSHCOG00000016419	rbfox1	91	71.264	ENSCGRG00001013729	Rbfox1	85	71.182	Cricetulus_griseus_chok1gshd
ENSHCOG00000016419	rbfox1	91	71.264	ENSCGRG00000003272	Rbfox1	85	71.182	Cricetulus_griseus_crigri
ENSHCOG00000016419	rbfox1	91	76.418	ENSCSEG00000008840	rbfox1	89	76.577	Cynoglossus_semilaevis
ENSHCOG00000016419	rbfox1	91	77.188	ENSDARG00000014746	rbfox1	100	77.725	Danio_rerio
ENSHCOG00000016419	rbfox1	91	70.317	ENSDNOG00000043612	RBFOX1	81	70.317	Dasypus_novemcinctus
ENSHCOG00000016419	rbfox1	91	69.452	ENSDORG00000010024	Rbfox1	87	69.452	Dipodomys_ordii
ENSHCOG00000016419	rbfox1	91	59.195	ENSETEG00000003771	RBFOX1	81	59.195	Echinops_telfairi
ENSHCOG00000016419	rbfox1	91	72.121	ENSEASG00005011599	RBFOX1	85	70.977	Equus_asinus_asinus
ENSHCOG00000016419	rbfox1	91	72.121	ENSECAG00000012667	RBFOX1	85	68.693	Equus_caballus
ENSHCOG00000016419	rbfox1	72	71.930	ENSELUG00000013096	rbfox1	78	72.515	Esox_lucius
ENSHCOG00000016419	rbfox1	91	76.875	ENSFCAG00000025322	RBFOX1	85	68.085	Felis_catus
ENSHCOG00000016419	rbfox1	83	69.470	ENSFALG00000004027	RBFOX1	93	69.470	Ficedula_albicollis
ENSHCOG00000016419	rbfox1	91	70.690	ENSFDAG00000007388	RBFOX1	85	70.605	Fukomys_damarensis
ENSHCOG00000016419	rbfox1	96	68.824	ENSGALG00000034325	RBFOX1	93	63.562	Gallus_gallus
ENSHCOG00000016419	rbfox1	91	76.324	ENSGAGG00000023681	RBFOX1	89	70.029	Gopherus_agassizii
ENSHCOG00000016419	rbfox1	91	76.562	ENSGGOG00000016871	-	83	76.562	Gorilla_gorilla
ENSHCOG00000016419	rbfox1	91	70.690	ENSHGLG00000016944	RBFOX1	85	70.605	Heterocephalus_glaber_female
ENSHCOG00000016419	rbfox1	91	70.690	ENSHGLG00100003272	RBFOX1	85	70.605	Heterocephalus_glaber_male
ENSHCOG00000016419	rbfox1	93	75.610	ENSIPUG00000015215	rbfox1	89	76.875	Ictalurus_punctatus
ENSHCOG00000016419	rbfox1	91	70.977	ENSSTOG00000000322	RBFOX1	86	70.893	Ictidomys_tridecemlineatus
ENSHCOG00000016419	rbfox1	91	69.741	ENSJJAG00000002575	Rbfox1	84	69.452	Jaculus_jaculus
ENSHCOG00000016419	rbfox1	91	82.282	ENSLBEG00000014659	rbfox1	91	82.831	Labrus_bergylta
ENSHCOG00000016419	rbfox1	91	70.571	ENSLOCG00000006675	rbfox1	85	70.571	Lepisosteus_oculatus
ENSHCOG00000016419	rbfox1	69	73.993	ENSLAFG00000011480	RBFOX1	87	73.993	Loxodonta_africana
ENSHCOG00000016419	rbfox1	91	76.562	ENSMFAG00000036447	RBFOX1	83	76.562	Macaca_fascicularis
ENSHCOG00000016419	rbfox1	91	76.562	ENSMMUG00000003458	RBFOX1	83	76.562	Macaca_mulatta
ENSHCOG00000016419	rbfox1	91	70.402	ENSMNEG00000032034	RBFOX1	84	70.317	Macaca_nemestrina
ENSHCOG00000016419	rbfox1	91	76.562	ENSMLEG00000015382	RBFOX1	83	76.562	Mandrillus_leucophaeus
ENSHCOG00000016419	rbfox1	91	78.852	ENSMAMG00000003142	rbfox1	87	82.812	Mastacembelus_armatus
ENSHCOG00000016419	rbfox1	73	70.968	ENSMGAG00000008606	RBFOX1	91	70.438	Meleagris_gallopavo
ENSHCOG00000016419	rbfox1	91	76.250	ENSMICG00000034286	RBFOX1	83	76.250	Microcebus_murinus
ENSHCOG00000016419	rbfox1	91	70.977	ENSMOCG00000020932	Rbfox1	88	70.893	Microtus_ochrogaster
ENSHCOG00000016419	rbfox1	98	80.473	ENSMMOG00000009716	rbfox1	93	79.882	Mola_mola
ENSHCOG00000016419	rbfox1	86	68.389	ENSMODG00000005826	RBFOX1	90	68.389	Monodelphis_domestica
ENSHCOG00000016419	rbfox1	92	81.515	ENSMALG00000003337	rbfox1	84	83.077	Monopterus_albus
ENSHCOG00000016419	rbfox1	91	70.977	MGP_CAROLIEiJ_G0020427	Rbfox1	85	70.893	Mus_caroli
ENSHCOG00000016419	rbfox1	91	72.644	ENSMUSG00000008658	Rbfox1	91	70.803	Mus_musculus
ENSHCOG00000016419	rbfox1	91	70.977	MGP_PahariEiJ_G0016135	Rbfox1	85	70.893	Mus_pahari
ENSHCOG00000016419	rbfox1	91	70.977	MGP_SPRETEiJ_G0021321	Rbfox1	85	70.893	Mus_spretus
ENSHCOG00000016419	rbfox1	86	68.085	ENSMPUG00000014822	RBFOX1	81	68.085	Mustela_putorius_furo
ENSHCOG00000016419	rbfox1	69	73.723	ENSMLUG00000015896	RBFOX1	87	73.897	Myotis_lucifugus
ENSHCOG00000016419	rbfox1	91	70.402	ENSNGAG00000023276	Rbfox1	87	70.317	Nannospalax_galili
ENSHCOG00000016419	rbfox1	91	63.610	ENSNBRG00000011084	rbfox1	81	64.183	Neolamprologus_brichardi
ENSHCOG00000016419	rbfox1	91	76.250	ENSNLEG00000010017	-	83	76.250	Nomascus_leucogenys
ENSHCOG00000016419	rbfox1	91	70.977	ENSODEG00000013166	RBFOX1	85	70.893	Octodon_degus
ENSHCOG00000016419	rbfox1	86	67.674	ENSOANG00000002379	RBFOX1	85	67.781	Ornithorhynchus_anatinus
ENSHCOG00000016419	rbfox1	61	76.777	ENSOCUG00000001205	-	91	76.777	Oryctolagus_cuniculus
ENSHCOG00000016419	rbfox1	91	70.317	ENSOGAG00000025535	RBFOX1	85	70.317	Otolemur_garnettii
ENSHCOG00000016419	rbfox1	61	66.351	ENSOARG00000005135	RBFOX1	79	66.351	Ovis_aries
ENSHCOG00000016419	rbfox1	91	76.562	ENSPPAG00000036238	-	86	76.562	Pan_paniscus
ENSHCOG00000016419	rbfox1	91	76.875	ENSPPRG00000006546	RBFOX1	83	76.875	Panthera_pardus
ENSHCOG00000016419	rbfox1	91	64.907	ENSPTIG00000021154	RBFOX1	85	61.934	Panthera_tigris_altaica
ENSHCOG00000016419	rbfox1	91	76.562	ENSPTRG00000007744	RBFOX1	83	76.562	Pan_troglodytes
ENSHCOG00000016419	rbfox1	91	76.562	ENSPANG00000026500	RBFOX1	83	76.562	Papio_anubis
ENSHCOG00000016419	rbfox1	76	78.927	ENSPKIG00000019353	rbfox1	82	78.927	Paramormyrops_kingsleyae
ENSHCOG00000016419	rbfox1	91	76.562	ENSPKIG00000009667	-	95	69.527	Paramormyrops_kingsleyae
ENSHCOG00000016419	rbfox1	91	70.317	ENSPSIG00000006523	RBFOX1	84	70.317	Pelodiscus_sinensis
ENSHCOG00000016419	rbfox1	91	70.977	ENSPEMG00000017607	Rbfox1	85	70.893	Peromyscus_maniculatus_bairdii
ENSHCOG00000016419	rbfox1	64	75.502	ENSPCIG00000026887	RBFOX1	86	75.502	Phascolarctos_cinereus
ENSHCOG00000016419	rbfox1	86	68.389	ENSPPYG00000007079	-	81	68.389	Pongo_abelii
ENSHCOG00000016419	rbfox1	91	65.805	ENSPCAG00000002630	RBFOX1	89	65.805	Procavia_capensis
ENSHCOG00000016419	rbfox1	91	76.562	ENSPCOG00000025687	RBFOX1	83	76.562	Propithecus_coquereli
ENSHCOG00000016419	rbfox1	91	66.667	ENSPVAG00000013467	RBFOX1	81	66.667	Pteropus_vampyrus
ENSHCOG00000016419	rbfox1	91	74.194	ENSPNAG00000023109	rbfox1	89	73.746	Pygocentrus_nattereri
ENSHCOG00000016419	rbfox1	91	70.605	ENSRNOG00000002827	Rbfox1	85	68.485	Rattus_norvegicus
ENSHCOG00000016419	rbfox1	91	76.562	ENSRBIG00000044478	RBFOX1	86	76.562	Rhinopithecus_bieti
ENSHCOG00000016419	rbfox1	91	76.562	ENSRROG00000044411	RBFOX1	83	76.562	Rhinopithecus_roxellana
ENSHCOG00000016419	rbfox1	91	77.500	ENSSBOG00000033726	RBFOX1	83	77.500	Saimiri_boliviensis_boliviensis
ENSHCOG00000016419	rbfox1	91	70.605	ENSSHAG00000009257	RBFOX1	89	74.917	Sarcophilus_harrisii
ENSHCOG00000016419	rbfox1	91	66.349	ENSSFOG00015023675	rbfox1	82	65.815	Scleropages_formosus
ENSHCOG00000016419	rbfox1	91	72.036	ENSSFOG00015009955	-	81	71.601	Scleropages_formosus
ENSHCOG00000016419	rbfox1	93	85.075	ENSSMAG00000015505	rbfox1	92	84.776	Scophthalmus_maximus
ENSHCOG00000016419	rbfox1	91	87.580	ENSSDUG00000016413	rbfox1	84	86.901	Seriola_dumerili
ENSHCOG00000016419	rbfox1	98	83.478	ENSSLDG00000009353	rbfox1	97	82.849	Seriola_lalandi_dorsalis
ENSHCOG00000016419	rbfox1	91	77.500	ENSSPUG00000009732	RBFOX1	87	77.500	Sphenodon_punctatus
ENSHCOG00000016419	rbfox1	91	84.242	ENSSPAG00000009723	rbfox1	86	83.939	Stegastes_partitus
ENSHCOG00000016419	rbfox1	91	70.115	ENSSSCG00000007917	RBFOX1	90	68.085	Sus_scrofa
ENSHCOG00000016419	rbfox1	91	70.605	ENSTGUG00000004562	RBFOX1	87	70.605	Taeniopygia_guttata
ENSHCOG00000016419	rbfox1	92	81.845	ENSTRUG00000020940	rbfox1	92	82.036	Takifugu_rubripes
ENSHCOG00000016419	rbfox1	69	62.457	ENSTNIG00000002567	rbfox1	100	64.605	Tetraodon_nigroviridis
ENSHCOG00000016419	rbfox1	91	70.402	ENSTTRG00000005700	RBFOX1	81	70.402	Tursiops_truncatus
ENSHCOG00000016419	rbfox1	91	70.497	ENSUAMG00000024633	RBFOX1	88	71.429	Ursus_americanus
ENSHCOG00000016419	rbfox1	91	66.772	ENSUMAG00000003579	RBFOX1	84	66.772	Ursus_maritimus
ENSHCOG00000016419	rbfox1	69	73.626	ENSVPAG00000001284	RBFOX1	64	73.626	Vicugna_pacos
ENSHCOG00000016419	rbfox1	91	76.875	ENSVVUG00000017311	RBFOX1	85	68.085	Vulpes_vulpes