EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000016446 (Gene tree)
Gene ID: 109514105
Gene Symbol: rbm19
Alias: nil per os|npo
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6479 bases
Position: chrKV879872.1:974383-980861
Accession: 109514105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000013070	RRM_1	PF00076.22	5e-84	1	6
ENSHCOP00000013070	RRM_1	PF00076.22	5e-84	2	6
ENSHCOP00000013070	RRM_1	PF00076.22	5e-84	3	6
ENSHCOP00000013070	RRM_1	PF00076.22	5e-84	4	6
ENSHCOP00000013070	RRM_1	PF00076.22	5e-84	5	6
ENSHCOP00000013070	RRM_1	PF00076.22	5e-84	6	6
ENSHCOP00000025748	RRM_1	PF00076.22	3.7e-74	1	6
ENSHCOP00000025748	RRM_1	PF00076.22	3.7e-74	2	6
ENSHCOP00000025748	RRM_1	PF00076.22	3.7e-74	3	6
ENSHCOP00000025748	RRM_1	PF00076.22	3.7e-74	4	6
ENSHCOP00000025748	RRM_1	PF00076.22	3.7e-74	5	6
ENSHCOP00000025748	RRM_1	PF00076.22	3.7e-74	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027154	-	2598	-	ENSHCOP00000025748	865 (aa)	-	-
ENSHCOT00000020287	-	2703	XM_019866914	ENSHCOP00000013070	900 (aa)	XP_019722473	-

Gene Model

Click here to download ENSHCOG00000016446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000016446's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000016446	rbm19	74	36.000	ENSHCOG00000013502	pabpc1a	57	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000016446	rbm19	99	58.299	ENSG00000122965	RBM19	85	74.737	Homo_sapiens
ENSHCOG00000016446	rbm19	100	78.873	ENSAPOG00000010507	rbm19	100	79.632	Acanthochromis_polyacanthus
ENSHCOG00000016446	rbm19	99	57.720	ENSAMEG00000008544	RBM19	99	58.048	Ailuropoda_melanoleuca
ENSHCOG00000016446	rbm19	98	79.376	ENSACIG00000017780	rbm19	99	79.399	Amphilophus_citrinellus
ENSHCOG00000016446	rbm19	100	77.682	ENSAOCG00000008554	rbm19	100	78.172	Amphiprion_ocellaris
ENSHCOG00000016446	rbm19	97	76.940	ENSAPEG00000022381	rbm19	96	77.494	Amphiprion_percula
ENSHCOG00000016446	rbm19	99	78.408	ENSATEG00000007000	rbm19	99	79.110	Anabas_testudineus
ENSHCOG00000016446	rbm19	92	55.580	ENSAPLG00000015319	RBM19	92	74.269	Anas_platyrhynchos
ENSHCOG00000016446	rbm19	99	56.352	ENSACAG00000005065	RBM19	99	56.909	Anolis_carolinensis
ENSHCOG00000016446	rbm19	99	58.203	ENSANAG00000024136	RBM19	99	58.689	Aotus_nancymaae
ENSHCOG00000016446	rbm19	100	70.494	ENSACLG00000001399	rbm19	100	71.030	Astatotilapia_calliptera
ENSHCOG00000016446	rbm19	65	71.669	ENSAMXG00000017073	rbm19	99	62.697	Astyanax_mexicanus
ENSHCOG00000016446	rbm19	100	57.588	ENSBTAG00000031824	RBM19	99	57.830	Bos_taurus
ENSHCOG00000016446	rbm19	77	47.368	WBGene00004315	rbd-1	89	47.368	Caenorhabditis_elegans
ENSHCOG00000016446	rbm19	99	57.720	ENSCJAG00000009798	RBM19	99	58.351	Callithrix_jacchus
ENSHCOG00000016446	rbm19	99	57.321	ENSCAFG00000009146	RBM19	98	58.255	Canis_familiaris
ENSHCOG00000016446	rbm19	99	57.425	ENSCAFG00020017862	RBM19	98	58.359	Canis_lupus_dingo
ENSHCOG00000016446	rbm19	99	58.204	ENSCHIG00000014917	RBM19	99	58.111	Capra_hircus
ENSHCOG00000016446	rbm19	89	58.593	ENSTSYG00000007207	RBM19	96	58.553	Carlito_syrichta
ENSHCOG00000016446	rbm19	98	57.923	ENSCAPG00000006869	RBM19	98	58.661	Cavia_aperea
ENSHCOG00000016446	rbm19	99	58.842	ENSCPOG00000026629	RBM19	99	58.966	Cavia_porcellus
ENSHCOG00000016446	rbm19	95	51.038	ENSCCAG00000026637	-	99	51.593	Cebus_capucinus
ENSHCOG00000016446	rbm19	99	57.917	ENSCCAG00000021665	-	99	58.359	Cebus_capucinus
ENSHCOG00000016446	rbm19	98	58.061	ENSCATG00000035841	RBM19	99	58.298	Cercocebus_atys
ENSHCOG00000016446	rbm19	99	57.922	ENSCLAG00000009965	RBM19	99	58.128	Chinchilla_lanigera
ENSHCOG00000016446	rbm19	99	54.681	ENSCSAG00000002352	RBM19	95	69.643	Chlorocebus_sabaeus
ENSHCOG00000016446	rbm19	99	59.152	ENSCPBG00000011990	RBM19	99	59.448	Chrysemys_picta_bellii
ENSHCOG00000016446	rbm19	78	53.268	ENSCING00000023076	-	100	52.276	Ciona_intestinalis
ENSHCOG00000016446	rbm19	99	58.610	ENSCANG00000035927	RBM19	99	59.252	Colobus_angolensis_palliatus
ENSHCOG00000016446	rbm19	99	59.437	ENSCGRG00001000323	Rbm19	99	59.814	Cricetulus_griseus_chok1gshd
ENSHCOG00000016446	rbm19	99	59.437	ENSCGRG00000010371	Rbm19	99	59.814	Cricetulus_griseus_crigri
ENSHCOG00000016446	rbm19	100	74.787	ENSCSEG00000017436	rbm19	100	75.641	Cynoglossus_semilaevis
ENSHCOG00000016446	rbm19	100	72.649	ENSCVAG00000000300	rbm19	100	73.297	Cyprinodon_variegatus
ENSHCOG00000016446	rbm19	99	65.584	ENSDARG00000042590	rbm19	99	65.944	Danio_rerio
ENSHCOG00000016446	rbm19	99	56.726	ENSDNOG00000024534	RBM19	95	57.560	Dasypus_novemcinctus
ENSHCOG00000016446	rbm19	97	57.985	ENSDORG00000008549	Rbm19	100	58.110	Dipodomys_ordii
ENSHCOG00000016446	rbm19	98	37.566	FBgn0036018	CG3335	98	37.726	Drosophila_melanogaster
ENSHCOG00000016446	rbm19	63	81.159	ENSETEG00000016887	-	57	80.882	Echinops_telfairi
ENSHCOG00000016446	rbm19	79	45.663	ENSEBUG00000008521	-	94	45.083	Eptatretus_burgeri
ENSHCOG00000016446	rbm19	99	58.696	ENSEASG00005009452	RBM19	99	59.605	Equus_asinus_asinus
ENSHCOG00000016446	rbm19	99	58.884	ENSECAG00000023716	RBM19	99	59.336	Equus_caballus
ENSHCOG00000016446	rbm19	99	69.264	ENSELUG00000012561	rbm19	99	70.282	Esox_lucius
ENSHCOG00000016446	rbm19	99	57.277	ENSFCAG00000002962	RBM19	98	58.229	Felis_catus
ENSHCOG00000016446	rbm19	98	57.553	ENSFALG00000007768	RBM19	99	58.038	Ficedula_albicollis
ENSHCOG00000016446	rbm19	99	57.128	ENSFDAG00000004629	RBM19	99	57.497	Fukomys_damarensis
ENSHCOG00000016446	rbm19	100	74.480	ENSFHEG00000012578	rbm19	100	75.137	Fundulus_heteroclitus
ENSHCOG00000016446	rbm19	97	70.655	ENSGMOG00000013120	rbm19	100	70.880	Gadus_morhua
ENSHCOG00000016446	rbm19	98	58.447	ENSGALG00000008289	RBM19	99	59.194	Gallus_gallus
ENSHCOG00000016446	rbm19	100	74.401	ENSGAFG00000012337	rbm19	100	74.401	Gambusia_affinis
ENSHCOG00000016446	rbm19	99	75.135	ENSGACG00000009462	rbm19	100	76.387	Gasterosteus_aculeatus
ENSHCOG00000016446	rbm19	62	66.952	ENSGAGG00000019457	RBM19	99	67.123	Gopherus_agassizii
ENSHCOG00000016446	rbm19	99	57.601	ENSGGOG00000007371	RBM19	99	58.471	Gorilla_gorilla
ENSHCOG00000016446	rbm19	100	76.626	ENSHBUG00000009047	rbm19	100	76.847	Haplochromis_burtoni
ENSHCOG00000016446	rbm19	99	58.054	ENSHGLG00000010899	RBM19	99	59.034	Heterocephalus_glaber_female
ENSHCOG00000016446	rbm19	99	57.350	ENSHGLG00100017936	RBM19	99	58.524	Heterocephalus_glaber_male
ENSHCOG00000016446	rbm19	99	64.255	ENSIPUG00000023849	rbm19	99	64.541	Ictalurus_punctatus
ENSHCOG00000016446	rbm19	100	76.591	ENSKMAG00000014807	rbm19	100	76.211	Kryptolebias_marmoratus
ENSHCOG00000016446	rbm19	100	79.133	ENSLBEG00000012897	rbm19	100	78.905	Labrus_bergylta
ENSHCOG00000016446	rbm19	77	56.143	ENSLACG00000012030	RBM19	100	60.709	Latimeria_chalumnae
ENSHCOG00000016446	rbm19	99	63.880	ENSLOCG00000008341	rbm19	99	63.627	Lepisosteus_oculatus
ENSHCOG00000016446	rbm19	95	56.389	ENSLAFG00000004187	RBM19	100	58.343	Loxodonta_africana
ENSHCOG00000016446	rbm19	99	58.549	ENSMFAG00000046091	RBM19	99	56.341	Macaca_fascicularis
ENSHCOG00000016446	rbm19	99	58.653	ENSMMUG00000010496	RBM19	99	59.110	Macaca_mulatta
ENSHCOG00000016446	rbm19	99	54.006	ENSMNEG00000028452	RBM19	99	56.192	Macaca_nemestrina
ENSHCOG00000016446	rbm19	99	57.277	ENSMLEG00000034550	RBM19	98	57.840	Mandrillus_leucophaeus
ENSHCOG00000016446	rbm19	100	79.027	ENSMAMG00000014397	rbm19	100	79.027	Mastacembelus_armatus
ENSHCOG00000016446	rbm19	100	76.017	ENSMZEG00005016607	rbm19	100	76.206	Maylandia_zebra
ENSHCOG00000016446	rbm19	97	52.511	ENSMGAG00000010087	RBM19	100	52.802	Meleagris_gallopavo
ENSHCOG00000016446	rbm19	99	58.653	ENSMAUG00000019290	Rbm19	99	60.227	Mesocricetus_auratus
ENSHCOG00000016446	rbm19	99	58.299	ENSMICG00000014423	RBM19	99	59.440	Microcebus_murinus
ENSHCOG00000016446	rbm19	99	74.267	ENSMMOG00000017839	rbm19	99	74.159	Mola_mola
ENSHCOG00000016446	rbm19	99	58.836	ENSMODG00000003597	RBM19	99	59.310	Monodelphis_domestica
ENSHCOG00000016446	rbm19	100	77.558	ENSMALG00000012647	rbm19	100	77.558	Monopterus_albus
ENSHCOG00000016446	rbm19	99	58.977	MGP_CAROLIEiJ_G0027656	Rbm19	99	60.312	Mus_caroli
ENSHCOG00000016446	rbm19	99	58.750	ENSMUSG00000029594	Rbm19	99	60.104	Mus_musculus
ENSHCOG00000016446	rbm19	99	59.502	MGP_PahariEiJ_G0024238	Rbm19	99	60.332	Mus_pahari
ENSHCOG00000016446	rbm19	99	58.996	MGP_SPRETEiJ_G0028656	Rbm19	99	59.896	Mus_spretus
ENSHCOG00000016446	rbm19	99	57.217	ENSMPUG00000002694	RBM19	98	58.058	Mustela_putorius_furo
ENSHCOG00000016446	rbm19	99	58.008	ENSMLUG00000015075	RBM19	99	58.180	Myotis_lucifugus
ENSHCOG00000016446	rbm19	100	57.516	ENSNGAG00000009076	Rbm19	99	58.781	Nannospalax_galili
ENSHCOG00000016446	rbm19	100	75.626	ENSNBRG00000005913	rbm19	100	75.843	Neolamprologus_brichardi
ENSHCOG00000016446	rbm19	99	57.988	ENSNLEG00000000190	RBM19	99	58.921	Nomascus_leucogenys
ENSHCOG00000016446	rbm19	95	61.435	ENSMEUG00000004045	RBM19	90	61.161	Notamacropus_eugenii
ENSHCOG00000016446	rbm19	99	57.157	ENSOPRG00000012064	RBM19	99	58.714	Ochotona_princeps
ENSHCOG00000016446	rbm19	99	57.233	ENSODEG00000012977	RBM19	99	57.985	Octodon_degus
ENSHCOG00000016446	rbm19	99	74.841	ENSONIG00000013576	rbm19	100	79.889	Oreochromis_niloticus
ENSHCOG00000016446	rbm19	99	58.360	ENSOCUG00000009398	RBM19	99	58.254	Oryctolagus_cuniculus
ENSHCOG00000016446	rbm19	99	75.996	ENSORLG00000008077	rbm19	99	76.322	Oryzias_latipes
ENSHCOG00000016446	rbm19	98	75.162	ENSORLG00020013187	rbm19	99	75.573	Oryzias_latipes_hni
ENSHCOG00000016446	rbm19	99	75.591	ENSORLG00015001774	rbm19	99	75.376	Oryzias_latipes_hsok
ENSHCOG00000016446	rbm19	100	75.748	ENSOMEG00000003334	rbm19	100	76.709	Oryzias_melastigma
ENSHCOG00000016446	rbm19	95	55.196	ENSOGAG00000000602	RBM19	100	56.782	Otolemur_garnettii
ENSHCOG00000016446	rbm19	100	58.021	ENSOARG00000006827	RBM19	99	58.273	Ovis_aries
ENSHCOG00000016446	rbm19	99	58.238	ENSPPAG00000043712	RBM19	99	59.006	Pan_paniscus
ENSHCOG00000016446	rbm19	99	57.277	ENSPPRG00000023027	RBM19	98	58.004	Panthera_pardus
ENSHCOG00000016446	rbm19	99	54.545	ENSPTIG00000011096	RBM19	99	54.262	Panthera_tigris_altaica
ENSHCOG00000016446	rbm19	99	58.238	ENSPTRG00000005494	RBM19	99	58.903	Pan_troglodytes
ENSHCOG00000016446	rbm19	99	58.229	ENSPANG00000004795	RBM19	95	60.458	Papio_anubis
ENSHCOG00000016446	rbm19	100	63.412	ENSPKIG00000017095	rbm19	100	63.695	Paramormyrops_kingsleyae
ENSHCOG00000016446	rbm19	88	57.454	ENSPSIG00000008191	RBM19	99	57.192	Pelodiscus_sinensis
ENSHCOG00000016446	rbm19	85	80.431	ENSPMGG00000019087	rbm19	99	80.431	Periophthalmus_magnuspinnatus
ENSHCOG00000016446	rbm19	99	59.623	ENSPEMG00000018058	Rbm19	99	60.521	Peromyscus_maniculatus_bairdii
ENSHCOG00000016446	rbm19	99	58.212	ENSPCIG00000028861	RBM19	99	66.368	Phascolarctos_cinereus
ENSHCOG00000016446	rbm19	99	73.226	ENSPFOG00000015300	rbm19	99	74.030	Poecilia_formosa
ENSHCOG00000016446	rbm19	100	74.179	ENSPLAG00000000059	rbm19	100	75.055	Poecilia_latipinna
ENSHCOG00000016446	rbm19	99	73.118	ENSPMEG00000018585	rbm19	99	73.815	Poecilia_mexicana
ENSHCOG00000016446	rbm19	100	74.190	ENSPREG00000000978	rbm19	100	74.298	Poecilia_reticulata
ENSHCOG00000016446	rbm19	99	56.549	ENSPPYG00000004993	RBM19	99	57.365	Pongo_abelii
ENSHCOG00000016446	rbm19	56	65.471	ENSPCAG00000005063	-	58	65.179	Procavia_capensis
ENSHCOG00000016446	rbm19	99	58.689	ENSPCOG00000016190	RBM19	99	59.521	Propithecus_coquereli
ENSHCOG00000016446	rbm19	99	56.937	ENSPVAG00000011618	RBM19	99	57.657	Pteropus_vampyrus
ENSHCOG00000016446	rbm19	100	74.121	ENSPNYG00000017434	rbm19	100	74.547	Pundamilia_nyererei
ENSHCOG00000016446	rbm19	99	64.868	ENSPNAG00000012069	rbm19	99	65.536	Pygocentrus_nattereri
ENSHCOG00000016446	rbm19	99	58.264	ENSRNOG00000001397	Rbm19	99	59.423	Rattus_norvegicus
ENSHCOG00000016446	rbm19	99	58.255	ENSRBIG00000041419	RBM19	99	58.438	Rhinopithecus_bieti
ENSHCOG00000016446	rbm19	99	58.048	ENSRROG00000031938	RBM19	99	59.167	Rhinopithecus_roxellana
ENSHCOG00000016446	rbm19	95	37.718	YPR112C	-	79	36.692	Saccharomyces_cerevisiae
ENSHCOG00000016446	rbm19	99	56.549	ENSSBOG00000021434	-	99	59.287	Saimiri_boliviensis_boliviensis
ENSHCOG00000016446	rbm19	88	51.367	ENSSBOG00000022679	-	99	51.098	Saimiri_boliviensis_boliviensis
ENSHCOG00000016446	rbm19	99	58.730	ENSSHAG00000012256	RBM19	99	59.703	Sarcophilus_harrisii
ENSHCOG00000016446	rbm19	99	62.248	ENSSFOG00015005124	rbm19	99	62.394	Scleropages_formosus
ENSHCOG00000016446	rbm19	100	79.482	ENSSMAG00000011828	rbm19	100	79.482	Scophthalmus_maximus
ENSHCOG00000016446	rbm19	100	78.625	ENSSDUG00000013544	rbm19	100	78.518	Seriola_dumerili
ENSHCOG00000016446	rbm19	90	81.762	ENSSLDG00000025413	rbm19	96	82.335	Seriola_lalandi_dorsalis
ENSHCOG00000016446	rbm19	62	66.497	ENSSPUG00000011064	RBM19	100	67.123	Sphenodon_punctatus
ENSHCOG00000016446	rbm19	97	78.161	ENSSPAG00000018685	rbm19	98	78.736	Stegastes_partitus
ENSHCOG00000016446	rbm19	99	58.712	ENSSSCG00000009868	RBM19	99	59.209	Sus_scrofa
ENSHCOG00000016446	rbm19	100	57.203	ENSTGUG00000009017	RBM19	99	58.004	Taeniopygia_guttata
ENSHCOG00000016446	rbm19	100	70.869	ENSTRUG00000016032	rbm19	100	71.292	Takifugu_rubripes
ENSHCOG00000016446	rbm19	72	77.049	ENSTBEG00000000703	RBM19	75	72.903	Tupaia_belangeri
ENSHCOG00000016446	rbm19	90	57.756	ENSTTRG00000003987	RBM19	84	58.086	Tursiops_truncatus
ENSHCOG00000016446	rbm19	98	57.248	ENSUAMG00000002076	RBM19	98	57.712	Ursus_americanus
ENSHCOG00000016446	rbm19	99	57.676	ENSUMAG00000010816	RBM19	99	58.048	Ursus_maritimus
ENSHCOG00000016446	rbm19	99	57.632	ENSVVUG00000007886	RBM19	98	58.108	Vulpes_vulpes
ENSHCOG00000016446	rbm19	100	56.394	ENSXETG00000017668	rbm19	99	56.902	Xenopus_tropicalis
ENSHCOG00000016446	rbm19	100	73.871	ENSXCOG00000016995	rbm19	100	73.871	Xiphophorus_couchianus
ENSHCOG00000016446	rbm19	100	73.848	ENSXMAG00000007641	rbm19	100	74.384	Xiphophorus_maculatus