EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000016455 (Gene tree)
Gene ID: 109522722
Gene Symbol: e4f1
Alias: zgc:114190
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 8103 bases
Position: chrKV880153.1:316673-324775
Accession: 109522722
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000013333	zf-C2H2	PF00096.26	2.6e-28	1	5
ENSHCOP00000013333	zf-C2H2	PF00096.26	2.6e-28	2	5
ENSHCOP00000013333	zf-C2H2	PF00096.26	2.6e-28	3	5
ENSHCOP00000013333	zf-C2H2	PF00096.26	2.6e-28	4	5
ENSHCOP00000013333	zf-C2H2	PF00096.26	2.6e-28	5	5
ENSHCOP00000013333	zf-met	PF12874.7	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000020632	-	2661	XM_019881480	ENSHCOP00000013333	761 (aa)	XP_019737039	UPI00094EE90B

Gene Model

Click here to download ENSHCOG00000016455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000016455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000016455	e4f1	55	35.542	ENSHCOG00000001345	-	85	35.542
ENSHCOG00000016455	e4f1	55	38.983	ENSHCOG00000020984	-	83	41.250
ENSHCOG00000016455	e4f1	63	37.356	ENSHCOG00000008168	-	96	40.580
ENSHCOG00000016455	e4f1	59	37.427	ENSHCOG00000001252	-	96	37.427
ENSHCOG00000016455	e4f1	73	43.636	ENSHCOG00000011612	zfat	70	43.636
ENSHCOG00000016455	e4f1	60	36.190	ENSHCOG00000020972	-	98	39.264
ENSHCOG00000016455	e4f1	61	41.667	ENSHCOG00000020976	-	59	41.667
ENSHCOG00000016455	e4f1	68	43.210	ENSHCOG00000010282	znf236	74	43.210
ENSHCOG00000016455	e4f1	69	33.971	ENSHCOG00000006286	ZNF319	90	35.795
ENSHCOG00000016455	e4f1	50	43.750	ENSHCOG00000003041	-	95	43.750
ENSHCOG00000016455	e4f1	71	42.857	ENSHCOG00000001942	-	97	42.857
ENSHCOG00000016455	e4f1	60	37.949	ENSHCOG00000014713	-	99	38.503
ENSHCOG00000016455	e4f1	56	38.182	ENSHCOG00000001338	-	97	38.182
ENSHCOG00000016455	e4f1	60	41.975	ENSHCOG00000001272	-	93	44.000
ENSHCOG00000016455	e4f1	55	41.975	ENSHCOG00000015441	-	66	41.975
ENSHCOG00000016455	e4f1	58	41.727	ENSHCOG00000015237	-	65	41.727
ENSHCOG00000016455	e4f1	51	40.517	ENSHCOG00000007358	-	92	40.517
ENSHCOG00000016455	e4f1	62	42.963	ENSHCOG00000019512	-	96	42.963
ENSHCOG00000016455	e4f1	57	44.872	ENSHCOG00000020940	-	78	44.872
ENSHCOG00000016455	e4f1	58	40.404	ENSHCOG00000007990	-	72	45.000
ENSHCOG00000016455	e4f1	71	38.636	ENSHCOG00000021073	-	78	38.636
ENSHCOG00000016455	e4f1	56	38.983	ENSHCOG00000011411	-	85	36.842
ENSHCOG00000016455	e4f1	73	38.728	ENSHCOG00000021033	-	81	38.728
ENSHCOG00000016455	e4f1	58	35.260	ENSHCOG00000019438	-	87	35.393
ENSHCOG00000016455	e4f1	59	42.157	ENSHCOG00000015476	-	89	41.905
ENSHCOG00000016455	e4f1	72	40.000	ENSHCOG00000008028	-	88	40.000
ENSHCOG00000016455	e4f1	74	37.805	ENSHCOG00000008181	-	69	37.805
ENSHCOG00000016455	e4f1	55	39.634	ENSHCOG00000020856	-	91	41.250
ENSHCOG00000016455	e4f1	73	34.536	ENSHCOG00000012131	prdm5	74	35.838
ENSHCOG00000016455	e4f1	55	30.275	ENSHCOG00000001901	si:dkey-89b17.4	63	36.145
ENSHCOG00000016455	e4f1	57	42.308	ENSHCOG00000015105	-	91	42.308
ENSHCOG00000016455	e4f1	55	36.000	ENSHCOG00000001238	-	89	38.710
ENSHCOG00000016455	e4f1	58	42.308	ENSHCOG00000021028	-	85	44.156
ENSHCOG00000016455	e4f1	58	40.260	ENSHCOG00000001883	-	86	45.205
ENSHCOG00000016455	e4f1	65	38.136	ENSHCOG00000019497	-	84	42.169
ENSHCOG00000016455	e4f1	58	38.750	ENSHCOG00000020909	-	91	35.754
ENSHCOG00000016455	e4f1	57	41.135	ENSHCOG00000015246	-	61	41.558
ENSHCOG00000016455	e4f1	55	34.177	ENSHCOG00000015241	-	65	42.857
ENSHCOG00000016455	e4f1	65	38.000	ENSHCOG00000013455	-	94	41.935
ENSHCOG00000016455	e4f1	62	38.235	ENSHCOG00000001318	-	99	37.725
ENSHCOG00000016455	e4f1	70	35.088	ENSHCOG00000007485	-	91	40.580
ENSHCOG00000016455	e4f1	69	40.566	ENSHCOG00000015639	znf319b	90	36.296
ENSHCOG00000016455	e4f1	56	43.210	ENSHCOG00000000511	-	68	43.210
ENSHCOG00000016455	e4f1	62	39.306	ENSHCOG00000000517	-	81	46.154
ENSHCOG00000016455	e4f1	61	37.576	ENSHCOG00000001245	-	66	37.576
ENSHCOG00000016455	e4f1	58	37.778	ENSHCOG00000001242	-	61	37.778
ENSHCOG00000016455	e4f1	59	37.640	ENSHCOG00000011432	-	93	39.744
ENSHCOG00000016455	e4f1	70	43.750	ENSHCOG00000012175	-	94	43.750
ENSHCOG00000016455	e4f1	69	38.462	ENSHCOG00000016337	si:ch211-216l23.1	58	38.462
ENSHCOG00000016455	e4f1	51	42.373	ENSHCOG00000014850	-	55	42.373
ENSHCOG00000016455	e4f1	59	38.235	ENSHCOG00000012617	-	84	38.235
ENSHCOG00000016455	e4f1	71	40.000	ENSHCOG00000007664	-	96	41.732
ENSHCOG00000016455	e4f1	62	41.892	ENSHCOG00000014887	-	75	41.892
ENSHCOG00000016455	e4f1	71	37.500	ENSHCOG00000014881	-	70	38.158
ENSHCOG00000016455	e4f1	56	36.517	ENSHCOG00000003085	-	82	36.517
ENSHCOG00000016455	e4f1	64	32.911	ENSHCOG00000000800	-	79	34.463
ENSHCOG00000016455	e4f1	58	37.363	ENSHCOG00000001256	-	73	37.363
ENSHCOG00000016455	e4f1	73	39.086	ENSHCOG00000015425	-	73	46.250
ENSHCOG00000016455	e4f1	59	38.750	ENSHCOG00000007681	-	87	38.750
ENSHCOG00000016455	e4f1	59	41.176	ENSHCOG00000019481	-	69	41.250
ENSHCOG00000016455	e4f1	65	42.391	ENSHCOG00000001638	-	86	42.391
ENSHCOG00000016455	e4f1	55	35.652	ENSHCOG00000014890	znf646	59	35.652
ENSHCOG00000016455	e4f1	52	38.750	ENSHCOG00000000627	-	68	38.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000016455	e4f1	100	64.982	ENSCSEG00000015852	e4f1	98	58.363	Cynoglossus_semilaevis
ENSHCOG00000016455	e4f1	100	66.839	ENSCVAG00000002788	e4f1	100	66.710	Cyprinodon_variegatus
ENSHCOG00000016455	e4f1	62	49.324	ENSEBUG00000016435	e4f1	81	32.736	Eptatretus_burgeri
ENSHCOG00000016455	e4f1	99	65.609	ENSFHEG00000022551	e4f1	97	66.372	Fundulus_heteroclitus
ENSHCOG00000016455	e4f1	100	60.938	ENSGMOG00000011409	e4f1	95	61.250	Gadus_morhua
ENSHCOG00000016455	e4f1	100	67.876	ENSGACG00000011808	e4f1	100	67.617	Gasterosteus_aculeatus
ENSHCOG00000016455	e4f1	100	50.064	ENSIPUG00000005379	e4f1	99	50.000	Ictalurus_punctatus
ENSHCOG00000016455	e4f1	100	68.568	ENSLBEG00000026373	e4f1	100	69.809	Labrus_bergylta
ENSHCOG00000016455	e4f1	100	64.759	ENSMMOG00000007612	e4f1	100	64.759	Mola_mola
ENSHCOG00000016455	e4f1	100	70.347	ENSMALG00000007314	e4f1	100	70.090	Monopterus_albus
ENSHCOG00000016455	e4f1	100	65.557	ENSORLG00000009160	e4f1	100	66.325	Oryzias_latipes
ENSHCOG00000016455	e4f1	100	64.055	ENSORLG00020017974	e4f1	100	64.925	Oryzias_latipes_hni
ENSHCOG00000016455	e4f1	100	66.452	ENSORLG00015007385	e4f1	100	67.224	Oryzias_latipes_hsok
ENSHCOG00000016455	e4f1	100	66.795	ENSOMEG00000012220	e4f1	100	67.266	Oryzias_melastigma
ENSHCOG00000016455	e4f1	100	53.616	ENSPKIG00000001942	e4f1	99	54.078	Paramormyrops_kingsleyae
ENSHCOG00000016455	e4f1	86	82.000	ENSPMGG00000020527	e4f1	100	69.355	Periophthalmus_magnuspinnatus
ENSHCOG00000016455	e4f1	97	51.053	ENSSFOG00015021291	e4f1	96	50.863	Scleropages_formosus
ENSHCOG00000016455	e4f1	100	70.769	ENSSMAG00000014720	e4f1	100	71.575	Scophthalmus_maximus
ENSHCOG00000016455	e4f1	98	44.201	ENSSPUG00000011420	E4F1	95	45.408	Sphenodon_punctatus
ENSHCOG00000016455	e4f1	100	64.000	ENSTRUG00000005176	e4f1	100	65.668	Takifugu_rubripes
ENSHCOG00000016455	e4f1	96	65.119	ENSTNIG00000018001	e4f1	100	65.782	Tetraodon_nigroviridis
ENSHCOG00000016455	e4f1	67	69.369	ENSXETG00000016091	e4f1	99	69.369	Xenopus_tropicalis