EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000016611 (Gene tree)
Gene ID: -
Gene Symbol: chd8
Alias: si:ch211-10e2.6|wu:fi45h08
Full Name: chromodomain helicase DNA binding protein 8
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 14463 bases
Position: chrKV879833.1:286203-300665
Accession: 109512784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000013395	ResIII	PF04851.15	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000024266	-	6156	XM_019864773	ENSHCOP00000013395	2051 (aa)	XP_019720332	-

Gene Model

Click here to download ENSHCOG00000016611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000016611's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000016611	chd8	76	62.075	ENSHCOG00000000937	chd9	64	61.204
ENSHCOG00000016611	chd8	69	65.135	ENSHCOG00000014380	chd7	59	65.015

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000016611	chd8	91	62.941	ENSG00000100888	CHD8	86	82.955	Homo_sapiens
ENSHCOG00000016611	chd8	68	66.316	ENSAPOG00000009351	chd7	60	61.189	Acanthochromis_polyacanthus
ENSHCOG00000016611	chd8	90	80.162	ENSAPOG00000015560	chd8	85	76.790	Acanthochromis_polyacanthus
ENSHCOG00000016611	chd8	91	62.714	ENSAMEG00000006307	CHD8	76	63.677	Ailuropoda_melanoleuca
ENSHCOG00000016611	chd8	64	67.421	ENSACIG00000001590	chd7	60	67.424	Amphilophus_citrinellus
ENSHCOG00000016611	chd8	94	80.829	ENSACIG00000006440	chd8	85	76.898	Amphilophus_citrinellus
ENSHCOG00000016611	chd8	90	80.840	ENSAOCG00000016793	chd8	85	76.791	Amphiprion_ocellaris
ENSHCOG00000016611	chd8	64	68.151	ENSAOCG00000002337	chd7	60	66.642	Amphiprion_ocellaris
ENSHCOG00000016611	chd8	94	83.135	ENSATEG00000007108	chd8	85	81.616	Anabas_testudineus
ENSHCOG00000016611	chd8	64	65.894	ENSATEG00000002590	chd7	58	66.191	Anabas_testudineus
ENSHCOG00000016611	chd8	70	64.969	ENSAPLG00000005873	CHD7	50	61.831	Anas_platyrhynchos
ENSHCOG00000016611	chd8	90	62.308	ENSACAG00000003139	CHD8	79	62.698	Anolis_carolinensis
ENSHCOG00000016611	chd8	91	62.738	ENSANAG00000037714	CHD8	73	69.548	Aotus_nancymaae
ENSHCOG00000016611	chd8	99	82.012	ENSACLG00000019692	chd8	97	83.850	Astatotilapia_calliptera
ENSHCOG00000016611	chd8	71	62.533	ENSAMXG00000006180	chd7	59	62.888	Astyanax_mexicanus
ENSHCOG00000016611	chd8	82	68.349	ENSBTAG00000020422	CHD8	73	69.606	Bos_taurus
ENSHCOG00000016611	chd8	69	65.669	ENSBTAG00000021841	CHD7	51	65.241	Bos_taurus
ENSHCOG00000016611	chd8	91	62.903	ENSCJAG00000009002	CHD8	73	69.548	Callithrix_jacchus
ENSHCOG00000016611	chd8	91	62.811	ENSCAFG00000005626	CHD8	72	71.429	Canis_familiaris
ENSHCOG00000016611	chd8	91	64.774	ENSCAFG00020014565	CHD8	99	79.981	Canis_lupus_dingo
ENSHCOG00000016611	chd8	91	62.934	ENSCHIG00000026157	CHD8	76	63.952	Capra_hircus
ENSHCOG00000016611	chd8	91	62.701	ENSTSYG00000011939	CHD8	76	63.663	Carlito_syrichta
ENSHCOG00000016611	chd8	87	61.277	ENSCAPG00000016749	CHD8	70	61.600	Cavia_aperea
ENSHCOG00000016611	chd8	91	62.863	ENSCPOG00000002538	CHD8	76	63.474	Cavia_porcellus
ENSHCOG00000016611	chd8	91	62.836	ENSCCAG00000020467	CHD8	73	69.606	Cebus_capucinus
ENSHCOG00000016611	chd8	91	62.885	ENSCATG00000004861	CHD8	73	69.548	Cercocebus_atys
ENSHCOG00000016611	chd8	91	63.127	ENSCLAG00000001966	CHD8	76	63.754	Chinchilla_lanigera
ENSHCOG00000016611	chd8	91	62.854	ENSCSAG00000016489	CHD8	76	63.921	Chlorocebus_sabaeus
ENSHCOG00000016611	chd8	57	71.575	ENSCHOG00000008478	CHD7	56	69.259	Choloepus_hoffmanni
ENSHCOG00000016611	chd8	87	63.951	ENSCHOG00000003782	CHD8	74	64.471	Choloepus_hoffmanni
ENSHCOG00000016611	chd8	90	63.463	ENSCPBG00000012687	CHD8	79	64.149	Chrysemys_picta_bellii
ENSHCOG00000016611	chd8	68	70.072	ENSCPBG00000021517	CHD7	73	66.314	Chrysemys_picta_bellii
ENSHCOG00000016611	chd8	91	62.787	ENSCANG00000042948	CHD8	73	69.548	Colobus_angolensis_palliatus
ENSHCOG00000016611	chd8	90	63.337	ENSCGRG00001014351	Chd8	76	64.006	Cricetulus_griseus_chok1gshd
ENSHCOG00000016611	chd8	90	64.437	ENSCGRG00000009710	Chd8	78	65.046	Cricetulus_griseus_crigri
ENSHCOG00000016611	chd8	95	78.026	ENSCSEG00000021155	chd8	85	79.015	Cynoglossus_semilaevis
ENSHCOG00000016611	chd8	70	62.259	ENSCSEG00000017886	chd7	61	62.121	Cynoglossus_semilaevis
ENSHCOG00000016611	chd8	94	75.013	ENSDARG00000075543	chd8	80	76.674	Danio_rerio
ENSHCOG00000016611	chd8	71	61.722	ENSDARG00000075211	chd7	60	62.744	Danio_rerio
ENSHCOG00000016611	chd8	91	63.204	ENSDNOG00000005838	CHD8	76	63.704	Dasypus_novemcinctus
ENSHCOG00000016611	chd8	91	62.334	ENSDORG00000002050	Chd8	79	62.941	Dipodomys_ordii
ENSHCOG00000016611	chd8	78	68.867	ENSETEG00000012353	CHD8	72	69.313	Echinops_telfairi
ENSHCOG00000016611	chd8	83	59.874	ENSEBUG00000007607	chd8	74	61.805	Eptatretus_burgeri
ENSHCOG00000016611	chd8	91	64.850	ENSEASG00005010882	CHD8	92	64.918	Equus_asinus_asinus
ENSHCOG00000016611	chd8	91	62.762	ENSECAG00000016102	CHD8	76	64.489	Equus_caballus
ENSHCOG00000016611	chd8	70	65.217	ENSECAG00000001445	CHD7	52	65.211	Equus_caballus
ENSHCOG00000016611	chd8	59	98.438	ENSEEUG00000003523	CHD8	54	98.438	Erinaceus_europaeus
ENSHCOG00000016611	chd8	94	76.571	ENSELUG00000004302	chd8	83	72.616	Esox_lucius
ENSHCOG00000016611	chd8	69	61.779	ENSELUG00000024442	chd7	58	61.198	Esox_lucius
ENSHCOG00000016611	chd8	91	62.903	ENSFCAG00000013859	CHD8	78	63.821	Felis_catus
ENSHCOG00000016611	chd8	70	65.223	ENSFALG00000005570	CHD7	50	62.162	Ficedula_albicollis
ENSHCOG00000016611	chd8	91	62.894	ENSFDAG00000011368	CHD8	76	63.505	Fukomys_damarensis
ENSHCOG00000016611	chd8	69	66.103	ENSFDAG00000000528	CHD7	50	62.927	Fukomys_damarensis
ENSHCOG00000016611	chd8	82	83.411	ENSGMOG00000015075	chd8	82	83.677	Gadus_morhua
ENSHCOG00000016611	chd8	64	64.008	ENSGMOG00000004232	chd7	59	67.789	Gadus_morhua
ENSHCOG00000016611	chd8	70	64.763	ENSGALG00000041080	CHD7	50	61.647	Gallus_gallus
ENSHCOG00000016611	chd8	68	65.979	ENSGAFG00000006858	chd7	51	65.877	Gambusia_affinis
ENSHCOG00000016611	chd8	66	64.757	ENSGACG00000014897	chd7	62	64.612	Gasterosteus_aculeatus
ENSHCOG00000016611	chd8	68	69.713	ENSGAGG00000017996	CHD7	73	66.239	Gopherus_agassizii
ENSHCOG00000016611	chd8	91	64.351	ENSGAGG00000022951	CHD8	80	75.311	Gopherus_agassizii
ENSHCOG00000016611	chd8	91	62.934	ENSGGOG00000002251	CHD8	73	69.548	Gorilla_gorilla
ENSHCOG00000016611	chd8	94	76.511	ENSHBUG00000002850	chd8	85	80.269	Haplochromis_burtoni
ENSHCOG00000016611	chd8	91	63.140	ENSHGLG00000003559	CHD8	76	63.740	Heterocephalus_glaber_female
ENSHCOG00000016611	chd8	69	66.032	ENSHGLG00100015649	CHD7	50	62.992	Heterocephalus_glaber_male
ENSHCOG00000016611	chd8	91	63.140	ENSHGLG00100001031	CHD8	76	63.740	Heterocephalus_glaber_male
ENSHCOG00000016611	chd8	70	58.759	ENSIPUG00000007585	chd7	60	59.016	Ictalurus_punctatus
ENSHCOG00000016611	chd8	99	67.257	ENSIPUG00000019891	chd8	84	68.870	Ictalurus_punctatus
ENSHCOG00000016611	chd8	91	63.292	ENSSTOG00000001854	CHD8	76	64.087	Ictidomys_tridecemlineatus
ENSHCOG00000016611	chd8	91	63.609	ENSJJAG00000000408	Chd8	76	64.069	Jaculus_jaculus
ENSHCOG00000016611	chd8	90	63.541	ENSLACG00000011367	CHD8	77	63.500	Latimeria_chalumnae
ENSHCOG00000016611	chd8	91	62.720	ENSLAFG00000009358	CHD8	77	63.555	Loxodonta_africana
ENSHCOG00000016611	chd8	91	62.689	ENSMFAG00000035402	CHD8	73	69.548	Macaca_fascicularis
ENSHCOG00000016611	chd8	69	66.056	ENSMFAG00000041825	CHD7	57	65.211	Macaca_fascicularis
ENSHCOG00000016611	chd8	91	62.689	ENSMMUG00000015002	CHD8	73	69.548	Macaca_mulatta
ENSHCOG00000016611	chd8	91	62.934	ENSMNEG00000031076	CHD8	73	69.548	Macaca_nemestrina
ENSHCOG00000016611	chd8	91	62.885	ENSMLEG00000035911	CHD8	73	69.548	Mandrillus_leucophaeus
ENSHCOG00000016611	chd8	94	74.874	ENSMAMG00000016297	chd8	85	75.446	Mastacembelus_armatus
ENSHCOG00000016611	chd8	94	77.076	ENSMZEG00005012027	chd8	85	76.441	Maylandia_zebra
ENSHCOG00000016611	chd8	70	64.763	ENSMGAG00000011092	CHD7	50	61.647	Meleagris_gallopavo
ENSHCOG00000016611	chd8	90	59.512	ENSMAUG00000015827	Chd8	75	59.950	Mesocricetus_auratus
ENSHCOG00000016611	chd8	91	62.591	ENSMICG00000007735	CHD8	73	69.480	Microcebus_murinus
ENSHCOG00000016611	chd8	92	62.796	ENSMOCG00000013700	Chd8	79	63.992	Microtus_ochrogaster
ENSHCOG00000016611	chd8	94	76.544	ENSMMOG00000013335	chd8	85	77.783	Mola_mola
ENSHCOG00000016611	chd8	99	60.410	ENSMODG00000006219	CHD8	82	63.952	Monodelphis_domestica
ENSHCOG00000016611	chd8	94	76.719	ENSMALG00000011572	chd8	85	77.664	Monopterus_albus
ENSHCOG00000016611	chd8	64	67.986	ENSMALG00000004389	chd7	54	68.038	Monopterus_albus
ENSHCOG00000016611	chd8	90	63.171	MGP_CAROLIEiJ_G0019237	Chd8	73	69.757	Mus_caroli
ENSHCOG00000016611	chd8	90	63.171	ENSMUSG00000053754	Chd8	76	63.839	Mus_musculus
ENSHCOG00000016611	chd8	90	63.381	MGP_PahariEiJ_G0030258	Chd8	73	69.896	Mus_pahari
ENSHCOG00000016611	chd8	91	63.297	ENSMPUG00000000174	CHD8	76	63.917	Mustela_putorius_furo
ENSHCOG00000016611	chd8	69	66.058	ENSMPUG00000002338	CHD7	56	65.142	Mustela_putorius_furo
ENSHCOG00000016611	chd8	91	62.811	ENSMLUG00000001878	CHD8	76	63.821	Myotis_lucifugus
ENSHCOG00000016611	chd8	91	63.176	ENSNGAG00000022658	Chd8	76	63.835	Nannospalax_galili
ENSHCOG00000016611	chd8	94	84.783	ENSNBRG00000017428	chd8	85	80.061	Neolamprologus_brichardi
ENSHCOG00000016611	chd8	67	63.830	ENSNBRG00000001280	chd7	57	64.822	Neolamprologus_brichardi
ENSHCOG00000016611	chd8	91	62.689	ENSNLEG00000014445	CHD8	74	69.422	Nomascus_leucogenys
ENSHCOG00000016611	chd8	88	62.598	ENSMEUG00000011732	CHD8	74	63.505	Notamacropus_eugenii
ENSHCOG00000016611	chd8	82	69.226	ENSOPRG00000016120	CHD8	76	69.826	Ochotona_princeps
ENSHCOG00000016611	chd8	91	63.148	ENSODEG00000001047	CHD8	81	63.605	Octodon_degus
ENSHCOG00000016611	chd8	95	81.109	ENSONIG00000015569	chd8	91	80.226	Oreochromis_niloticus
ENSHCOG00000016611	chd8	69	64.177	ENSONIG00000016614	chd7	56	57.590	Oreochromis_niloticus
ENSHCOG00000016611	chd8	69	65.915	ENSOANG00000005042	CHD7	68	64.726	Ornithorhynchus_anatinus
ENSHCOG00000016611	chd8	73	63.564	ENSOCUG00000010034	CHD7	58	65.211	Oryctolagus_cuniculus
ENSHCOG00000016611	chd8	91	62.983	ENSOCUG00000010822	CHD8	87	63.754	Oryctolagus_cuniculus
ENSHCOG00000016611	chd8	99	80.390	ENSORLG00000012103	chd8	87	73.002	Oryzias_latipes
ENSHCOG00000016611	chd8	94	75.151	ENSORLG00020008031	chd8	85	75.480	Oryzias_latipes_hni
ENSHCOG00000016611	chd8	94	77.938	ENSOMEG00000012832	chd8	84	77.926	Oryzias_melastigma
ENSHCOG00000016611	chd8	91	62.983	ENSOGAG00000002722	CHD8	76	63.754	Otolemur_garnettii
ENSHCOG00000016611	chd8	91	62.854	ENSOARG00000019643	CHD8	76	63.871	Ovis_aries
ENSHCOG00000016611	chd8	91	62.543	ENSPPAG00000039987	CHD8	77	63.452	Pan_paniscus
ENSHCOG00000016611	chd8	91	62.903	ENSPPRG00000006591	CHD8	73	69.664	Panthera_pardus
ENSHCOG00000016611	chd8	91	62.903	ENSPTIG00000021989	CHD8	73	69.664	Panthera_tigris_altaica
ENSHCOG00000016611	chd8	91	62.836	ENSPTRG00000006124	CHD8	73	69.548	Pan_troglodytes
ENSHCOG00000016611	chd8	91	62.689	ENSPANG00000011742	CHD8	73	69.548	Papio_anubis
ENSHCOG00000016611	chd8	70	62.803	ENSPMGG00000018543	chd7	62	62.736	Periophthalmus_magnuspinnatus
ENSHCOG00000016611	chd8	90	63.681	ENSPEMG00000022977	Chd8	76	64.056	Peromyscus_maniculatus_bairdii
ENSHCOG00000016611	chd8	99	59.284	ENSPCIG00000020931	CHD8	92	64.150	Phascolarctos_cinereus
ENSHCOG00000016611	chd8	99	80.040	ENSPFOG00000016369	chd8	84	77.608	Poecilia_formosa
ENSHCOG00000016611	chd8	64	61.215	ENSPFOG00000010939	-	62	61.136	Poecilia_formosa
ENSHCOG00000016611	chd8	70	64.320	ENSPFOG00000004891	chd7	76	64.182	Poecilia_formosa
ENSHCOG00000016611	chd8	94	76.048	ENSPLAG00000018522	chd8	85	78.794	Poecilia_latipinna
ENSHCOG00000016611	chd8	70	62.999	ENSPMEG00000005879	chd7	60	62.930	Poecilia_mexicana
ENSHCOG00000016611	chd8	94	76.013	ENSPMEG00000006541	chd8	85	75.983	Poecilia_mexicana
ENSHCOG00000016611	chd8	56	65.481	ENSPREG00000014744	chd7	96	62.934	Poecilia_reticulata
ENSHCOG00000016611	chd8	99	79.830	ENSPREG00000021867	chd8	84	77.351	Poecilia_reticulata
ENSHCOG00000016611	chd8	91	62.512	ENSPPYG00000005596	CHD8	76	63.903	Pongo_abelii
ENSHCOG00000016611	chd8	80	77.087	ENSPCAG00000007099	CHD8	72	77.008	Procavia_capensis
ENSHCOG00000016611	chd8	91	62.288	ENSPCOG00000014628	CHD8	77	63.238	Propithecus_coquereli
ENSHCOG00000016611	chd8	87	65.803	ENSPVAG00000000272	CHD8	75	66.452	Pteropus_vampyrus
ENSHCOG00000016611	chd8	70	61.807	ENSPNYG00000012490	chd7	62	61.670	Pundamilia_nyererei
ENSHCOG00000016611	chd8	94	76.665	ENSPNYG00000018020	chd8	85	79.439	Pundamilia_nyererei
ENSHCOG00000016611	chd8	99	67.928	ENSPNAG00000003683	chd8	87	67.281	Pygocentrus_nattereri
ENSHCOG00000016611	chd8	64	63.920	ENSPNAG00000011245	chd7	59	64.184	Pygocentrus_nattereri
ENSHCOG00000016611	chd8	90	63.399	ENSRNOG00000025011	Chd8	76	64.069	Rattus_norvegicus
ENSHCOG00000016611	chd8	91	62.270	ENSRBIG00000039239	CHD8	73	65.916	Rhinopithecus_bieti
ENSHCOG00000016611	chd8	91	62.934	ENSRROG00000044285	CHD8	73	69.422	Rhinopithecus_roxellana
ENSHCOG00000016611	chd8	91	62.787	ENSSBOG00000023442	CHD8	78	63.803	Saimiri_boliviensis_boliviensis
ENSHCOG00000016611	chd8	92	62.846	ENSSHAG00000008118	CHD8	76	63.889	Sarcophilus_harrisii
ENSHCOG00000016611	chd8	89	80.203	ENSSFOG00015011577	chd8	84	67.441	Scleropages_formosus
ENSHCOG00000016611	chd8	68	65.680	ENSSFOG00015015077	chd7	56	59.019	Scleropages_formosus
ENSHCOG00000016611	chd8	95	78.788	ENSSMAG00000014060	chd8	83	77.804	Scophthalmus_maximus
ENSHCOG00000016611	chd8	62	67.341	ENSSMAG00000001453	-	51	67.052	Scophthalmus_maximus
ENSHCOG00000016611	chd8	94	74.613	ENSSDUG00000012439	chd8	85	75.734	Seriola_dumerili
ENSHCOG00000016611	chd8	94	76.853	ENSSLDG00000001679	chd8	84	76.725	Seriola_lalandi_dorsalis
ENSHCOG00000016611	chd8	82	65.716	ENSSARG00000004849	CHD8	80	66.532	Sorex_araneus
ENSHCOG00000016611	chd8	70	64.379	ENSSPUG00000009235	CHD7	52	61.350	Sphenodon_punctatus
ENSHCOG00000016611	chd8	70	65.113	ENSSPAG00000006320	chd7	55	65.635	Stegastes_partitus
ENSHCOG00000016611	chd8	94	80.371	ENSSPAG00000022956	chd8	85	77.809	Stegastes_partitus
ENSHCOG00000016611	chd8	91	62.916	ENSSSCG00000002127	CHD8	83	63.821	Sus_scrofa
ENSHCOG00000016611	chd8	70	64.872	ENSTGUG00000011196	CHD7	50	61.638	Taeniopygia_guttata
ENSHCOG00000016611	chd8	94	75.633	ENSTRUG00000006682	chd8	98	87.890	Takifugu_rubripes
ENSHCOG00000016611	chd8	55	69.112	ENSTRUG00000008632	chd7	54	61.608	Takifugu_rubripes
ENSHCOG00000016611	chd8	94	79.612	ENSTNIG00000007932	chd8	91	77.597	Tetraodon_nigroviridis
ENSHCOG00000016611	chd8	70	63.981	ENSTNIG00000002647	chd7	76	63.755	Tetraodon_nigroviridis
ENSHCOG00000016611	chd8	65	89.091	ENSTBEG00000012606	CHD8	57	89.091	Tupaia_belangeri
ENSHCOG00000016611	chd8	82	68.400	ENSTTRG00000016076	CHD8	73	69.316	Tursiops_truncatus
ENSHCOG00000016611	chd8	61	74.389	ENSUAMG00000004198	CHD8	99	75.211	Ursus_americanus
ENSHCOG00000016611	chd8	69	65.706	ENSUAMG00000025734	CHD7	59	63.258	Ursus_americanus
ENSHCOG00000016611	chd8	91	63.996	ENSUMAG00000004045	CHD8	84	64.954	Ursus_maritimus
ENSHCOG00000016611	chd8	69	65.915	ENSUMAG00000010436	CHD7	66	63.918	Ursus_maritimus
ENSHCOG00000016611	chd8	58	75.362	ENSVPAG00000007359	CHD8	52	75.362	Vicugna_pacos
ENSHCOG00000016611	chd8	91	62.903	ENSVVUG00000009444	CHD8	79	63.821	Vulpes_vulpes
ENSHCOG00000016611	chd8	90	59.674	ENSXETG00000017194	CHD8	99	77.020	Xenopus_tropicalis