EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHCOG00000016668 (Gene tree)
Gene ID
109514806
Gene Symbol
RBMS1 (1 of many)
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA-binding motif%2C single-stranded-interacting protein 1-like
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Minus strand
Length
17916 bases
Position
chrKV879885.1:291870-309785
Accession
109514806
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000026066RRM_1PF00076.222e-3112
ENSHCOP00000026066RRM_1PF00076.222e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000027334RBMS1 (1 of many)-2013536XM_019868194ENSHCOP00000026066395 (aa)XP_019723753UPI00094E479E
Gene Model
Click here to download ENSHCOG00000016668's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000016668's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHCOG00000016668RBMS19065.181ENSHCOG00000007894-8271.475
ENSHCOG00000016668RBMS19864.103ENSHCOG00000020097rbms1a9964.103
ENSHCOG00000016668RBMS19766.925ENSHCOG00000019929rbms2b8669.034
ENSHCOG00000016668RBMS18173.065ENSHCOG00000020072rbms2a8472.699
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000016668RBMS19474.734ENSG00000153250RBMS18492.523Homo_sapiens
ENSHCOG00000016668RBMS19864.872ENSAPOG00000013761rbms1a9964.872Acanthochromis_polyacanthus
ENSHCOG00000016668RBMS110083.333ENSAPOG00000024437-10082.323Acanthochromis_polyacanthus
ENSHCOG00000016668RBMS19473.684ENSAMEG00000012661RBMS19873.684Ailuropoda_melanoleuca
ENSHCOG00000016668RBMS19584.615ENSACIG00000021498RBMS19584.615Amphilophus_citrinellus
ENSHCOG00000016668RBMS19857.949ENSACIG00000000113rbms1a9958.718Amphilophus_citrinellus
ENSHCOG00000016668RBMS19865.128ENSAOCG00000010066rbms1a9965.128Amphiprion_ocellaris
ENSHCOG00000016668RBMS110084.810ENSAOCG00000014482-10084.810Amphiprion_ocellaris
ENSHCOG00000016668RBMS110084.810ENSAPEG00000018371-10084.810Amphiprion_percula
ENSHCOG00000016668RBMS19865.128ENSAPEG00000023563rbms1a9965.128Amphiprion_percula
ENSHCOG00000016668RBMS110081.772ENSATEG00000018573RBMS110081.266Anabas_testudineus
ENSHCOG00000016668RBMS19863.333ENSATEG00000015450rbms1a9963.333Anabas_testudineus
ENSHCOG00000016668RBMS19474.202ENSAPLG00000007282RBMS19474.202Anas_platyrhynchos
ENSHCOG00000016668RBMS19772.564ENSACAG00000011984RBMS18270.781Anolis_carolinensis
ENSHCOG00000016668RBMS18173.913ENSANAG00000024424RBMS110073.913Aotus_nancymaae
ENSHCOG00000016668RBMS110081.772ENSACLG00000013048RBMS110081.772Astatotilapia_calliptera
ENSHCOG00000016668RBMS19863.333ENSACLG00000021512rbms1a9964.103Astatotilapia_calliptera
ENSHCOG00000016668RBMS110077.778ENSAMXG00000009969RBMS110077.525Astyanax_mexicanus
ENSHCOG00000016668RBMS110070.202ENSAMXG00000002146rbms1a9968.939Astyanax_mexicanus
ENSHCOG00000016668RBMS19773.265ENSBTAG00000005180RBMS110072.099Bos_taurus
ENSHCOG00000016668RBMS19368.378ENSCJAG00000022465-9968.041Callithrix_jacchus
ENSHCOG00000016668RBMS19474.734ENSCJAG00000014861-9574.202Callithrix_jacchus
ENSHCOG00000016668RBMS19771.134ENSCJAG00000012871-9971.958Callithrix_jacchus
ENSHCOG00000016668RBMS19773.779ENSCAFG00000009922RBMS110072.346Canis_familiaris
ENSHCOG00000016668RBMS19474.468ENSCAFG00020006120RBMS110069.359Canis_lupus_dingo
ENSHCOG00000016668RBMS19473.936ENSCHIG00000023380RBMS19373.936Capra_hircus
ENSHCOG00000016668RBMS19474.734ENSTSYG00000005584RBMS19574.221Carlito_syrichta
ENSHCOG00000016668RBMS19872.959ENSCPOG00000012310RBMS19971.173Cavia_porcellus
ENSHCOG00000016668RBMS19474.734ENSCCAG00000033841RBMS19774.734Cebus_capucinus
ENSHCOG00000016668RBMS19773.834ENSCATG00000043032RBMS110073.834Cercocebus_atys
ENSHCOG00000016668RBMS19475.000ENSCLAG00000003031RBMS19475.000Chinchilla_lanigera
ENSHCOG00000016668RBMS19474.734ENSCSAG00000015687RBMS19374.734Chlorocebus_sabaeus
ENSHCOG00000016668RBMS110073.449ENSCPBG00000026455RBMS110073.449Chrysemys_picta_bellii
ENSHCOG00000016668RBMS19773.575ENSCANG00000042152RBMS110073.575Colobus_angolensis_palliatus
ENSHCOG00000016668RBMS110068.409ENSCGRG00001022833Rbms110068.409Cricetulus_griseus_chok1gshd
ENSHCOG00000016668RBMS19473.670ENSCGRG00000008824Rbms19970.663Cricetulus_griseus_crigri
ENSHCOG00000016668RBMS110081.108ENSCSEG00000010652RBMS110079.597Cynoglossus_semilaevis
ENSHCOG00000016668RBMS19863.333ENSCSEG00000000889rbms1a9963.333Cynoglossus_semilaevis
ENSHCOG00000016668RBMS19863.077ENSCVAG00000014698rbms1a9963.077Cyprinodon_variegatus
ENSHCOG00000016668RBMS110081.519ENSCVAG00000002027RBMS110080.759Cyprinodon_variegatus
ENSHCOG00000016668RBMS110071.106ENSDARG00000074023rbms1a9970.101Danio_rerio
ENSHCOG00000016668RBMS18872.283ENSDNOG00000040691RBMS19572.087Dasypus_novemcinctus
ENSHCOG00000016668RBMS19475.266ENSDORG00000007103Rbms19475.266Dipodomys_ordii
ENSHCOG00000016668RBMS19467.021ENSETEG00000012135RBMS19967.021Echinops_telfairi
ENSHCOG00000016668RBMS19773.522ENSEASG00005023132RBMS110072.346Equus_asinus_asinus
ENSHCOG00000016668RBMS19474.734ENSECAG00000019894RBMS110069.121Equus_caballus
ENSHCOG00000016668RBMS17384.932ENSEEUG00000005628RBMS17284.932Erinaceus_europaeus
ENSHCOG00000016668RBMS110064.987ENSELUG00000018923rbms1a10065.743Esox_lucius
ENSHCOG00000016668RBMS19670.185ENSELUG00000019328RBMS19470.185Esox_lucius
ENSHCOG00000016668RBMS19474.801ENSFCAG00000012524RBMS19574.294Felis_catus
ENSHCOG00000016668RBMS18874.716ENSFALG00000004440RBMS19574.504Ficedula_albicollis
ENSHCOG00000016668RBMS19475.266ENSFDAG00000015692RBMS19971.684Fukomys_damarensis
ENSHCOG00000016668RBMS110079.494ENSFHEG00000000720RBMS110079.747Fundulus_heteroclitus
ENSHCOG00000016668RBMS19863.077ENSFHEG00000005662rbms1a9772.549Fundulus_heteroclitus
ENSHCOG00000016668RBMS18365.882ENSGMOG00000000525rbms1a9964.689Gadus_morhua
ENSHCOG00000016668RBMS19773.265ENSGALG00000011132RBMS110071.712Gallus_gallus
ENSHCOG00000016668RBMS18765.889ENSGAFG00000011633rbms1a9465.889Gambusia_affinis
ENSHCOG00000016668RBMS110079.747ENSGAFG00000007708RBMS110081.519Gambusia_affinis
ENSHCOG00000016668RBMS110080.759ENSGACG00000005671RBMS110081.519Gasterosteus_aculeatus
ENSHCOG00000016668RBMS19162.133ENSGACG00000015174rbms1a9167.183Gasterosteus_aculeatus
ENSHCOG00000016668RBMS110073.449ENSGAGG00000007866RBMS110073.449Gopherus_agassizii
ENSHCOG00000016668RBMS19771.907ENSGGOG00000043756-10070.617Gorilla_gorilla
ENSHCOG00000016668RBMS19574.346ENSGGOG00000001264RBMS19874.346Gorilla_gorilla
ENSHCOG00000016668RBMS19483.784ENSHBUG00000004516RBMS19783.784Haplochromis_burtoni
ENSHCOG00000016668RBMS19863.333ENSHBUG00000004802rbms1a9964.103Haplochromis_burtoni
ENSHCOG00000016668RBMS19673.958ENSHGLG00000010387RBMS19871.611Heterocephalus_glaber_female
ENSHCOG00000016668RBMS19475.200ENSHGLG00100014105RBMS19871.611Heterocephalus_glaber_male
ENSHCOG00000016668RBMS110071.212ENSIPUG00000010131RBMS19969.949Ictalurus_punctatus
ENSHCOG00000016668RBMS110079.494ENSIPUG00000014677RBMS110079.494Ictalurus_punctatus
ENSHCOG00000016668RBMS19475.266ENSSTOG00000012501RBMS19971.684Ictidomys_tridecemlineatus
ENSHCOG00000016668RBMS19474.202ENSJJAG00000016543Rbms19374.202Jaculus_jaculus
ENSHCOG00000016668RBMS19861.795ENSKMAG00000011839-9962.308Kryptolebias_marmoratus
ENSHCOG00000016668RBMS110083.544ENSKMAG00000013911RBMS110083.544Kryptolebias_marmoratus
ENSHCOG00000016668RBMS110084.557ENSLBEG00000005787RBMS110084.557Labrus_bergylta
ENSHCOG00000016668RBMS19863.846ENSLBEG00000025962rbms1a9963.846Labrus_bergylta
ENSHCOG00000016668RBMS110070.968ENSLACG00000004324RBMS19970.471Latimeria_chalumnae
ENSHCOG00000016668RBMS110078.228ENSLOCG00000008622rbms1a10078.228Lepisosteus_oculatus
ENSHCOG00000016668RBMS19474.202ENSLAFG00000017217RBMS19874.202Loxodonta_africana
ENSHCOG00000016668RBMS19773.834ENSMFAG00000000274RBMS110073.834Macaca_fascicularis
ENSHCOG00000016668RBMS19773.834ENSMMUG00000016825RBMS110073.834Macaca_mulatta
ENSHCOG00000016668RBMS19773.834ENSMNEG00000039425RBMS110073.834Macaca_nemestrina
ENSHCOG00000016668RBMS19773.575ENSMLEG00000031517RBMS110073.575Mandrillus_leucophaeus
ENSHCOG00000016668RBMS19861.795ENSMAMG00000005018rbms1a9961.795Mastacembelus_armatus
ENSHCOG00000016668RBMS110082.025ENSMAMG00000003159-10081.772Mastacembelus_armatus
ENSHCOG00000016668RBMS19863.333ENSMZEG00005005661rbms1a9964.103Maylandia_zebra
ENSHCOG00000016668RBMS18283.951ENSMZEG00005007313RBMS19183.951Maylandia_zebra
ENSHCOG00000016668RBMS18875.284ENSMGAG00000011054RBMS110074.164Meleagris_gallopavo
ENSHCOG00000016668RBMS110068.409ENSMAUG00000008550Rbms110068.409Mesocricetus_auratus
ENSHCOG00000016668RBMS19474.734ENSMICG00000008325RBMS19874.734Microcebus_murinus
ENSHCOG00000016668RBMS110068.171ENSMOCG00000022617Rbms110068.171Microtus_ochrogaster
ENSHCOG00000016668RBMS110083.797ENSMMOG00000003707RBMS110083.797Mola_mola
ENSHCOG00000016668RBMS18766.474ENSMMOG00000018249rbms1a9166.474Mola_mola
ENSHCOG00000016668RBMS19474.734ENSMODG00000005250RBMS19374.734Monodelphis_domestica
ENSHCOG00000016668RBMS19679.265ENSMALG00000015715-10080.506Monopterus_albus
ENSHCOG00000016668RBMS19863.333ENSMALG00000014235rbms1a9963.333Monopterus_albus
ENSHCOG00000016668RBMS19968.825MGP_CAROLIEiJ_G0023586Rbms110068.409Mus_caroli
ENSHCOG00000016668RBMS19968.825ENSMUSG00000026970Rbms110068.409Mus_musculus
ENSHCOG00000016668RBMS19971.322MGP_PahariEiJ_G0025037Rbms110070.864Mus_pahari
ENSHCOG00000016668RBMS19969.065MGP_SPRETEiJ_G0024508Rbms110068.646Mus_spretus
ENSHCOG00000016668RBMS19471.429ENSMPUG00000000539RBMS19371.429Mustela_putorius_furo
ENSHCOG00000016668RBMS19569.951ENSMLUG00000008762RBMS19769.951Myotis_lucifugus
ENSHCOG00000016668RBMS110068.646ENSNGAG00000013636Rbms110068.646Nannospalax_galili
ENSHCOG00000016668RBMS18865.230ENSNBRG00000020217rbms1a9566.092Neolamprologus_brichardi
ENSHCOG00000016668RBMS18877.650ENSNBRG00000015151RBMS19477.650Neolamprologus_brichardi
ENSHCOG00000016668RBMS19474.734ENSNLEG00000001667RBMS19674.734Nomascus_leucogenys
ENSHCOG00000016668RBMS18163.043ENSMEUG00000000746RBMS110063.043Notamacropus_eugenii
ENSHCOG00000016668RBMS19468.085ENSOPRG00000012431RBMS19368.085Ochotona_princeps
ENSHCOG00000016668RBMS19474.468ENSODEG00000013934RBMS19374.468Octodon_degus
ENSHCOG00000016668RBMS19863.077ENSONIG00000003329rbms1a9963.846Oreochromis_niloticus
ENSHCOG00000016668RBMS110083.291ENSONIG00000008934RBMS110083.291Oreochromis_niloticus
ENSHCOG00000016668RBMS19474.734ENSOANG00000006166RBMS19574.734Ornithorhynchus_anatinus
ENSHCOG00000016668RBMS15453.909ENSOANG00000004477-9954.508Ornithorhynchus_anatinus
ENSHCOG00000016668RBMS19474.202ENSOCUG00000017365RBMS18874.202Oryctolagus_cuniculus
ENSHCOG00000016668RBMS110076.010ENSORLG00000016818RBMS19977.273Oryzias_latipes
ENSHCOG00000016668RBMS19861.538ENSORLG00000003917rbms1a9961.538Oryzias_latipes
ENSHCOG00000016668RBMS110076.010ENSORLG00020022335RBMS19977.273Oryzias_latipes_hni
ENSHCOG00000016668RBMS19861.282ENSORLG00020018663rbms1a9961.282Oryzias_latipes_hni
ENSHCOG00000016668RBMS110076.515ENSORLG00015018208RBMS19977.778Oryzias_latipes_hsok
ENSHCOG00000016668RBMS19861.538ENSORLG00015016556rbms1a9961.538Oryzias_latipes_hsok
ENSHCOG00000016668RBMS110077.215ENSOMEG00000002394RBMS19979.241Oryzias_melastigma
ENSHCOG00000016668RBMS18874.294ENSOGAG00000002900RBMS19574.085Otolemur_garnettii
ENSHCOG00000016668RBMS19473.936ENSOARG00000006870RBMS19373.936Ovis_aries
ENSHCOG00000016668RBMS19574.346ENSPPAG00000040083RBMS19874.734Pan_paniscus
ENSHCOG00000016668RBMS19472.074ENSPPAG00000036520-9972.074Pan_paniscus
ENSHCOG00000016668RBMS19474.801ENSPPRG00000005040RBMS19574.294Panthera_pardus
ENSHCOG00000016668RBMS19474.801ENSPTIG00000021240RBMS19574.294Panthera_tigris_altaica
ENSHCOG00000016668RBMS19870.588ENSPTRG00000039358-9772.340Pan_troglodytes
ENSHCOG00000016668RBMS19574.346ENSPTRG00000052304RBMS19874.734Pan_troglodytes
ENSHCOG00000016668RBMS19773.834ENSPANG00000001383RBMS110073.834Papio_anubis
ENSHCOG00000016668RBMS110071.392ENSPKIG00000012818rbms1a10071.899Paramormyrops_kingsleyae
ENSHCOG00000016668RBMS110075.819ENSPKIG00000001498rbms1a10075.315Paramormyrops_kingsleyae
ENSHCOG00000016668RBMS19475.266ENSPSIG00000010240RBMS19573.643Pelodiscus_sinensis
ENSHCOG00000016668RBMS19861.282ENSPMGG00000004341rbms1a9961.538Periophthalmus_magnuspinnatus
ENSHCOG00000016668RBMS18581.548ENSPMGG00000006310RBMS19677.077Periophthalmus_magnuspinnatus
ENSHCOG00000016668RBMS19474.468ENSPEMG00000009449Rbms19574.468Peromyscus_maniculatus_bairdii
ENSHCOG00000016668RBMS110072.593ENSPCIG00000018405RBMS110072.593Phascolarctos_cinereus
ENSHCOG00000016668RBMS110082.278ENSPFOG00000017483RBMS110082.278Poecilia_formosa
ENSHCOG00000016668RBMS19863.333ENSPFOG00000016116rbms1a9963.333Poecilia_formosa
ENSHCOG00000016668RBMS19863.333ENSPLAG00000013864rbms1a9963.333Poecilia_latipinna
ENSHCOG00000016668RBMS110080.253ENSPLAG00000000920RBMS110082.025Poecilia_latipinna
ENSHCOG00000016668RBMS19863.333ENSPMEG00000016185rbms1a9963.333Poecilia_mexicana
ENSHCOG00000016668RBMS110082.278ENSPMEG00000015838RBMS110082.278Poecilia_mexicana
ENSHCOG00000016668RBMS110082.025ENSPREG00000008146RBMS110082.025Poecilia_reticulata
ENSHCOG00000016668RBMS19863.333ENSPREG00000020161rbms1a9963.333Poecilia_reticulata
ENSHCOG00000016668RBMS19471.429ENSPPYG00000012879-9371.429Pongo_abelii
ENSHCOG00000016668RBMS18179.876ENSPCAG00000009673RBMS18079.876Procavia_capensis
ENSHCOG00000016668RBMS19474.734ENSPCOG00000027294RBMS19574.221Propithecus_coquereli
ENSHCOG00000016668RBMS19464.362ENSPVAG00000010429RBMS19364.362Pteropus_vampyrus
ENSHCOG00000016668RBMS110082.278ENSPNYG00000002643RBMS110082.278Pundamilia_nyererei
ENSHCOG00000016668RBMS18871.839ENSPNAG00000010225rbms1a8871.839Pygocentrus_nattereri
ENSHCOG00000016668RBMS110079.293ENSPNAG00000023479RBMS110079.040Pygocentrus_nattereri
ENSHCOG00000016668RBMS19373.656ENSRNOG00000008482Rbms19670.619Rattus_norvegicus
ENSHCOG00000016668RBMS19773.385ENSRBIG00000044262RBMS110073.385Rhinopithecus_bieti
ENSHCOG00000016668RBMS19773.834ENSRROG00000043108RBMS110073.834Rhinopithecus_roxellana
ENSHCOG00000016668RBMS19473.037ENSSBOG00000034705RBMS19873.037Saimiri_boliviensis_boliviensis
ENSHCOG00000016668RBMS19475.000ENSSHAG00000012271RBMS110070.435Sarcophilus_harrisii
ENSHCOG00000016668RBMS18874.425ENSSFOG00015014493rbms1a9574.499Scleropages_formosus
ENSHCOG00000016668RBMS110078.987ENSSFOG00015022929rbms110078.987Scleropages_formosus
ENSHCOG00000016668RBMS110082.785ENSSMAG00000012152RBMS19385.303Scophthalmus_maximus
ENSHCOG00000016668RBMS18766.181ENSSMAG00000012722rbms1a9466.181Scophthalmus_maximus
ENSHCOG00000016668RBMS110085.316ENSSDUG00000018803RBMS110085.316Seriola_dumerili
ENSHCOG00000016668RBMS19865.128ENSSDUG00000020602rbms1a9965.128Seriola_dumerili
ENSHCOG00000016668RBMS110085.570ENSSLDG00000016556RBMS110085.570Seriola_lalandi_dorsalis
ENSHCOG00000016668RBMS19865.128ENSSLDG00000009495rbms1a9965.128Seriola_lalandi_dorsalis
ENSHCOG00000016668RBMS18159.443ENSSARG00000011085RBMS18059.443Sorex_araneus
ENSHCOG00000016668RBMS18875.568ENSSPUG00000017163RBMS19475.354Sphenodon_punctatus
ENSHCOG00000016668RBMS110085.570ENSSPAG00000000059RBMS110085.570Stegastes_partitus
ENSHCOG00000016668RBMS19864.615ENSSPAG00000005371rbms1a9964.615Stegastes_partitus
ENSHCOG00000016668RBMS18874.148ENSSSCG00000015888RBMS110071.358Sus_scrofa
ENSHCOG00000016668RBMS19474.468ENSTGUG00000006606RBMS19374.468Taeniopygia_guttata
ENSHCOG00000016668RBMS110078.338ENSTRUG00000005466-10079.597Takifugu_rubripes
ENSHCOG00000016668RBMS19862.341ENSTRUG00000017155rbms1a9962.087Takifugu_rubripes
ENSHCOG00000016668RBMS19480.914ENSTNIG00000016496RBMS19783.621Tetraodon_nigroviridis
ENSHCOG00000016668RBMS19062.921ENSTNIG00000009477rbms1a9962.654Tetraodon_nigroviridis
ENSHCOG00000016668RBMS19466.223ENSTBEG00000016156RBMS19966.223Tupaia_belangeri
ENSHCOG00000016668RBMS19474.202ENSTTRG00000011058RBMS19974.202Tursiops_truncatus
ENSHCOG00000016668RBMS19474.468ENSUAMG00000022331RBMS19374.468Ursus_americanus
ENSHCOG00000016668RBMS19474.468ENSUMAG00000008605RBMS19774.468Ursus_maritimus
ENSHCOG00000016668RBMS19175.000ENSVPAG00000002716RBMS19277.077Vicugna_pacos
ENSHCOG00000016668RBMS19471.429ENSVVUG00000018682RBMS19574.504Vulpes_vulpes
ENSHCOG00000016668RBMS19468.700ENSXETG00000016204rbms19569.944Xenopus_tropicalis
ENSHCOG00000016668RBMS19861.538ENSXCOG00000001659rbms1a9961.538Xiphophorus_couchianus
ENSHCOG00000016668RBMS18881.375ENSXCOG00000000211RBMS19581.375Xiphophorus_couchianus
ENSHCOG00000016668RBMS19863.077ENSXMAG00000001802rbms1a9963.077Xiphophorus_maculatus
ENSHCOG00000016668RBMS110081.013ENSXMAG00000011405RBMS110081.013Xiphophorus_maculatus

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