EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000016720 (Gene tree)
Gene ID: 109518805
Gene Symbol: prpf19
Alias: fb18f09|prp19|wu:fb18f09|zgc:56158
Full Name: pre-mRNA processing factor 19
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 5976 bases
Position: chrKV880056.1:321984-327959
Accession: 109518805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000026102	Prp19	PF08606.11	1.5e-33	1	1
ENSHCOP00000026077	Prp19	PF08606.11	1.6e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027339	-	1458	-	ENSHCOP00000026077	485 (aa)	-	-
ENSHCOT00000020872	-	2641	XM_019874890	ENSHCOP00000026102	505 (aa)	XP_019730449	UPI00094F040D

Gene Model

Click here to download ENSHCOG00000016720's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG
hcq04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000016720's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000016720	prpf19	100	83.762	ENSG00000110107	PRPF19	100	87.619	Homo_sapiens
ENSHCOG00000016720	prpf19	100	95.446	ENSAPOG00000017823	prpf19	100	95.474	Acanthochromis_polyacanthus
ENSHCOG00000016720	prpf19	100	83.133	ENSAMEG00000007375	PRPF19	99	83.133	Ailuropoda_melanoleuca
ENSHCOG00000016720	prpf19	99	94.246	ENSACIG00000015876	prpf19	99	94.246	Amphilophus_citrinellus
ENSHCOG00000016720	prpf19	100	95.446	ENSAOCG00000020444	prpf19	100	95.446	Amphiprion_ocellaris
ENSHCOG00000016720	prpf19	100	95.446	ENSAPEG00000016076	prpf19	100	95.446	Amphiprion_percula
ENSHCOG00000016720	prpf19	100	95.842	ENSATEG00000008840	prpf19	100	95.842	Anabas_testudineus
ENSHCOG00000016720	prpf19	100	84.356	ENSACAG00000017797	PRPF19	100	84.356	Anolis_carolinensis
ENSHCOG00000016720	prpf19	100	83.564	ENSANAG00000021762	PRPF19	100	83.564	Aotus_nancymaae
ENSHCOG00000016720	prpf19	100	95.248	ENSACLG00000009416	prpf19	100	95.474	Astatotilapia_calliptera
ENSHCOG00000016720	prpf19	100	93.267	ENSAMXG00000011547	prpf19	100	93.267	Astyanax_mexicanus
ENSHCOG00000016720	prpf19	100	83.762	ENSBTAG00000014366	PRPF19	100	83.762	Bos_taurus
ENSHCOG00000016720	prpf19	100	52.465	WBGene00020423	prp-19	100	52.148	Caenorhabditis_elegans
ENSHCOG00000016720	prpf19	100	83.564	ENSCJAG00000016509	PRPF19	100	83.564	Callithrix_jacchus
ENSHCOG00000016720	prpf19	100	83.366	ENSCAFG00000016438	PRPF19	98	83.366	Canis_familiaris
ENSHCOG00000016720	prpf19	100	83.366	ENSCAFG00020012565	PRPF19	100	83.366	Canis_lupus_dingo
ENSHCOG00000016720	prpf19	100	83.762	ENSCHIG00000018281	PRPF19	100	83.762	Capra_hircus
ENSHCOG00000016720	prpf19	99	83.400	ENSTSYG00000006860	PRPF19	99	83.400	Carlito_syrichta
ENSHCOG00000016720	prpf19	99	84.000	ENSCAPG00000016225	PRPF19	100	84.000	Cavia_aperea
ENSHCOG00000016720	prpf19	100	83.960	ENSCPOG00000020688	PRPF19	100	83.960	Cavia_porcellus
ENSHCOG00000016720	prpf19	100	83.564	ENSCCAG00000025839	PRPF19	100	83.564	Cebus_capucinus
ENSHCOG00000016720	prpf19	100	83.762	ENSCATG00000041921	PRPF19	100	83.762	Cercocebus_atys
ENSHCOG00000016720	prpf19	99	84.137	ENSCLAG00000003338	PRPF19	100	84.137	Chinchilla_lanigera
ENSHCOG00000016720	prpf19	100	83.762	ENSCSAG00000006254	PRPF19	100	83.762	Chlorocebus_sabaeus
ENSHCOG00000016720	prpf19	62	74.038	ENSCHOG00000005840	PRPF19	100	74.038	Choloepus_hoffmanni
ENSHCOG00000016720	prpf19	100	84.163	ENSCPBG00000027061	PRPF19	100	82.970	Chrysemys_picta_bellii
ENSHCOG00000016720	prpf19	99	68.707	ENSCING00000016625	-	99	67.800	Ciona_intestinalis
ENSHCOG00000016720	prpf19	100	68.515	ENSCSAVG00000002027	-	100	68.515	Ciona_savignyi
ENSHCOG00000016720	prpf19	99	81.529	ENSCANG00000027155	PRPF19	99	39.029	Colobus_angolensis_palliatus
ENSHCOG00000016720	prpf19	100	83.762	ENSCGRG00001002699	Prpf19	100	83.762	Cricetulus_griseus_chok1gshd
ENSHCOG00000016720	prpf19	100	83.366	ENSCGRG00000008964	Prpf19	100	83.366	Cricetulus_griseus_crigri
ENSHCOG00000016720	prpf19	100	95.446	ENSCSEG00000010411	prpf19	100	95.446	Cynoglossus_semilaevis
ENSHCOG00000016720	prpf19	100	93.069	ENSCVAG00000012011	prpf19	100	93.069	Cyprinodon_variegatus
ENSHCOG00000016720	prpf19	100	91.683	ENSDARG00000015239	prpf19	100	91.683	Danio_rerio
ENSHCOG00000016720	prpf19	100	83.762	ENSDNOG00000005797	PRPF19	100	83.762	Dasypus_novemcinctus
ENSHCOG00000016720	prpf19	100	83.762	ENSDORG00000006906	Prpf19	100	83.762	Dipodomys_ordii
ENSHCOG00000016720	prpf19	100	66.471	FBgn0261119	Prp19	99	65.545	Drosophila_melanogaster
ENSHCOG00000016720	prpf19	100	72.871	ENSETEG00000012295	PRPF19	100	72.871	Echinops_telfairi
ENSHCOG00000016720	prpf19	86	74.584	ENSEBUG00000013075	prpf19	100	77.435	Eptatretus_burgeri
ENSHCOG00000016720	prpf19	100	84.067	ENSEASG00005008056	PRPF19	98	84.067	Equus_asinus_asinus
ENSHCOG00000016720	prpf19	100	83.564	ENSECAG00000007322	PRPF19	100	83.564	Equus_caballus
ENSHCOG00000016720	prpf19	100	85.149	ENSELUG00000004578	prpf19	100	84.950	Esox_lucius
ENSHCOG00000016720	prpf19	100	90.891	ENSELUG00000020276	-	100	90.693	Esox_lucius
ENSHCOG00000016720	prpf19	100	83.366	ENSFCAG00000013668	PRPF19	100	83.366	Felis_catus
ENSHCOG00000016720	prpf19	100	82.772	ENSFALG00000012084	PRPF19	100	82.772	Ficedula_albicollis
ENSHCOG00000016720	prpf19	91	78.924	ENSFDAG00000009420	PRPF19	100	81.390	Fukomys_damarensis
ENSHCOG00000016720	prpf19	100	93.663	ENSFHEG00000022135	prpf19	100	93.663	Fundulus_heteroclitus
ENSHCOG00000016720	prpf19	100	94.059	ENSGMOG00000014756	prpf19	100	94.059	Gadus_morhua
ENSHCOG00000016720	prpf19	100	82.970	ENSGALG00000036530	PRPF19	100	82.970	Gallus_gallus
ENSHCOG00000016720	prpf19	100	93.069	ENSGAFG00000008931	prpf19	100	93.069	Gambusia_affinis
ENSHCOG00000016720	prpf19	100	94.059	ENSGACG00000017976	prpf19	100	94.059	Gasterosteus_aculeatus
ENSHCOG00000016720	prpf19	100	83.168	ENSGAGG00000013328	PRPF19	100	83.168	Gopherus_agassizii
ENSHCOG00000016720	prpf19	100	83.762	ENSGGOG00000008648	PRPF19	100	83.762	Gorilla_gorilla
ENSHCOG00000016720	prpf19	100	95.248	ENSHBUG00000008394	prpf19	100	95.248	Haplochromis_burtoni
ENSHCOG00000016720	prpf19	100	83.762	ENSHGLG00000003934	PRPF19	100	83.762	Heterocephalus_glaber_female
ENSHCOG00000016720	prpf19	99	69.524	ENSHGLG00100010649	PRPF19	100	67.671	Heterocephalus_glaber_male
ENSHCOG00000016720	prpf19	100	92.871	ENSIPUG00000013084	prpf19	100	92.871	Ictalurus_punctatus
ENSHCOG00000016720	prpf19	100	83.366	ENSSTOG00000001598	PRPF19	100	83.366	Ictidomys_tridecemlineatus
ENSHCOG00000016720	prpf19	100	83.960	ENSJJAG00000020609	Prpf19	100	83.960	Jaculus_jaculus
ENSHCOG00000016720	prpf19	100	93.465	ENSKMAG00000010257	prpf19	100	93.465	Kryptolebias_marmoratus
ENSHCOG00000016720	prpf19	100	95.248	ENSLBEG00000027436	prpf19	100	95.248	Labrus_bergylta
ENSHCOG00000016720	prpf19	100	83.762	ENSLACG00000003434	PRPF19	100	83.762	Latimeria_chalumnae
ENSHCOG00000016720	prpf19	95	74.840	ENSLOCG00000008123	prpf19	100	78.085	Lepisosteus_oculatus
ENSHCOG00000016720	prpf19	100	80.651	ENSLAFG00000002644	PRPF19	100	80.651	Loxodonta_africana
ENSHCOG00000016720	prpf19	100	83.762	ENSMFAG00000036743	PRPF19	100	83.762	Macaca_fascicularis
ENSHCOG00000016720	prpf19	100	83.762	ENSMMUG00000014530	PRPF19	100	83.762	Macaca_mulatta
ENSHCOG00000016720	prpf19	100	83.762	ENSMNEG00000044485	PRPF19	100	83.762	Macaca_nemestrina
ENSHCOG00000016720	prpf19	100	83.762	ENSMLEG00000043312	PRPF19	100	83.762	Mandrillus_leucophaeus
ENSHCOG00000016720	prpf19	100	95.842	ENSMAMG00000006843	prpf19	100	96.121	Mastacembelus_armatus
ENSHCOG00000016720	prpf19	100	95.248	ENSMZEG00005013356	prpf19	100	95.248	Maylandia_zebra
ENSHCOG00000016720	prpf19	98	79.000	ENSMGAG00000003180	PRPF19	100	79.000	Meleagris_gallopavo
ENSHCOG00000016720	prpf19	100	83.168	ENSMAUG00000012585	Prpf19	100	83.168	Mesocricetus_auratus
ENSHCOG00000016720	prpf19	100	83.762	ENSMICG00000011236	PRPF19	100	83.762	Microcebus_murinus
ENSHCOG00000016720	prpf19	100	83.762	ENSMOCG00000010383	Prpf19	100	83.762	Microtus_ochrogaster
ENSHCOG00000016720	prpf19	100	95.644	ENSMMOG00000003138	prpf19	100	95.446	Mola_mola
ENSHCOG00000016720	prpf19	100	83.762	ENSMODG00000020338	PRPF19	100	83.762	Monodelphis_domestica
ENSHCOG00000016720	prpf19	99	87.160	ENSMALG00000010981	prpf19	99	87.160	Monopterus_albus
ENSHCOG00000016720	prpf19	100	83.762	MGP_CAROLIEiJ_G0022704	Prpf19	100	83.762	Mus_caroli
ENSHCOG00000016720	prpf19	100	83.762	ENSMUSG00000024735	Prpf19	100	83.762	Mus_musculus
ENSHCOG00000016720	prpf19	100	83.762	MGP_PahariEiJ_G0014198	Prpf19	100	83.762	Mus_pahari
ENSHCOG00000016720	prpf19	100	83.762	MGP_SPRETEiJ_G0023618	Prpf19	100	83.762	Mus_spretus
ENSHCOG00000016720	prpf19	100	83.366	ENSMPUG00000014432	PRPF19	100	83.366	Mustela_putorius_furo
ENSHCOG00000016720	prpf19	100	81.154	ENSMLUG00000017597	PRPF19	100	81.154	Myotis_lucifugus
ENSHCOG00000016720	prpf19	100	83.960	ENSNGAG00000012671	Prpf19	100	83.960	Nannospalax_galili
ENSHCOG00000016720	prpf19	100	95.446	ENSNBRG00000000055	prpf19	100	95.446	Neolamprologus_brichardi
ENSHCOG00000016720	prpf19	100	83.762	ENSNLEG00000013618	PRPF19	100	83.762	Nomascus_leucogenys
ENSHCOG00000016720	prpf19	99	81.727	ENSOPRG00000008630	PRPF19	100	81.727	Ochotona_princeps
ENSHCOG00000016720	prpf19	100	84.158	ENSODEG00000004043	PRPF19	100	84.158	Octodon_degus
ENSHCOG00000016720	prpf19	100	95.446	ENSONIG00000004880	prpf19	100	95.446	Oreochromis_niloticus
ENSHCOG00000016720	prpf19	100	80.418	ENSOCUG00000015689	PRPF19	100	80.418	Oryctolagus_cuniculus
ENSHCOG00000016720	prpf19	100	93.861	ENSORLG00000004666	prpf19	100	93.861	Oryzias_latipes
ENSHCOG00000016720	prpf19	100	93.861	ENSORLG00020013561	prpf19	100	93.861	Oryzias_latipes_hni
ENSHCOG00000016720	prpf19	100	93.861	ENSORLG00015022196	prpf19	100	93.861	Oryzias_latipes_hsok
ENSHCOG00000016720	prpf19	100	93.267	ENSOMEG00000004424	prpf19	100	93.267	Oryzias_melastigma
ENSHCOG00000016720	prpf19	100	83.564	ENSOGAG00000016756	PRPF19	100	83.564	Otolemur_garnettii
ENSHCOG00000016720	prpf19	100	83.762	ENSOARG00000015596	PRPF19	100	83.762	Ovis_aries
ENSHCOG00000016720	prpf19	99	82.318	ENSPPAG00000030246	PRPF19	100	80.943	Pan_paniscus
ENSHCOG00000016720	prpf19	100	83.366	ENSPPRG00000002470	PRPF19	100	83.366	Panthera_pardus
ENSHCOG00000016720	prpf19	99	83.534	ENSPTIG00000006541	PRPF19	99	83.534	Panthera_tigris_altaica
ENSHCOG00000016720	prpf19	100	83.762	ENSPTRG00000003724	PRPF19	100	83.762	Pan_troglodytes
ENSHCOG00000016720	prpf19	100	83.762	ENSPANG00000002762	PRPF19	100	83.762	Papio_anubis
ENSHCOG00000016720	prpf19	100	91.287	ENSPKIG00000019715	prpf19	100	91.287	Paramormyrops_kingsleyae
ENSHCOG00000016720	prpf19	83	82.857	ENSPSIG00000007497	PRPF19	100	82.857	Pelodiscus_sinensis
ENSHCOG00000016720	prpf19	100	94.851	ENSPMGG00000017527	prpf19	100	94.851	Periophthalmus_magnuspinnatus
ENSHCOG00000016720	prpf19	100	83.366	ENSPEMG00000019270	Prpf19	100	83.366	Peromyscus_maniculatus_bairdii
ENSHCOG00000016720	prpf19	99	83.544	ENSPCIG00000003485	PRPF19	79	84.615	Phascolarctos_cinereus
ENSHCOG00000016720	prpf19	100	93.267	ENSPFOG00000002558	prpf19	100	93.267	Poecilia_formosa
ENSHCOG00000016720	prpf19	100	93.267	ENSPLAG00000017942	prpf19	100	93.267	Poecilia_latipinna
ENSHCOG00000016720	prpf19	100	93.267	ENSPMEG00000008638	prpf19	100	93.267	Poecilia_mexicana
ENSHCOG00000016720	prpf19	100	93.636	ENSPREG00000002489	prpf19	96	93.636	Poecilia_reticulata
ENSHCOG00000016720	prpf19	100	84.277	ENSPPYG00000003202	PRPF19	91	84.277	Pongo_abelii
ENSHCOG00000016720	prpf19	100	83.168	ENSPCAG00000001930	PRPF19	100	83.168	Procavia_capensis
ENSHCOG00000016720	prpf19	100	84.778	ENSPCOG00000014017	PRPF19	100	84.778	Propithecus_coquereli
ENSHCOG00000016720	prpf19	100	83.762	ENSPVAG00000014669	PRPF19	100	83.762	Pteropus_vampyrus
ENSHCOG00000016720	prpf19	100	95.248	ENSPNYG00000000859	prpf19	100	95.248	Pundamilia_nyererei
ENSHCOG00000016720	prpf19	100	93.267	ENSPNAG00000019245	prpf19	100	93.267	Pygocentrus_nattereri
ENSHCOG00000016720	prpf19	100	83.762	ENSRNOG00000020897	Prpf19	100	83.762	Rattus_norvegicus
ENSHCOG00000016720	prpf19	100	83.762	ENSRBIG00000036672	PRPF19	100	83.762	Rhinopithecus_bieti
ENSHCOG00000016720	prpf19	100	83.762	ENSRROG00000041572	PRPF19	100	83.762	Rhinopithecus_roxellana
ENSHCOG00000016720	prpf19	100	83.564	ENSSBOG00000022840	PRPF19	100	83.564	Saimiri_boliviensis_boliviensis
ENSHCOG00000016720	prpf19	100	83.762	ENSSHAG00000009462	PRPF19	100	83.762	Sarcophilus_harrisii
ENSHCOG00000016720	prpf19	100	90.693	ENSSFOG00015001236	prpf19	100	90.495	Scleropages_formosus
ENSHCOG00000016720	prpf19	100	95.248	ENSSMAG00000002273	prpf19	100	95.248	Scophthalmus_maximus
ENSHCOG00000016720	prpf19	100	96.238	ENSSDUG00000003299	prpf19	100	96.238	Seriola_dumerili
ENSHCOG00000016720	prpf19	100	96.238	ENSSLDG00000003019	prpf19	100	96.238	Seriola_lalandi_dorsalis
ENSHCOG00000016720	prpf19	100	82.574	ENSSPUG00000019328	PRPF19	100	82.574	Sphenodon_punctatus
ENSHCOG00000016720	prpf19	100	95.842	ENSSPAG00000008546	prpf19	100	95.842	Stegastes_partitus
ENSHCOG00000016720	prpf19	100	83.564	ENSSSCG00000013107	PRPF19	100	83.564	Sus_scrofa
ENSHCOG00000016720	prpf19	100	82.970	ENSTGUG00000006319	PRPF19	100	82.970	Taeniopygia_guttata
ENSHCOG00000016720	prpf19	100	94.851	ENSTRUG00000008502	prpf19	100	94.851	Takifugu_rubripes
ENSHCOG00000016720	prpf19	66	96.396	ENSTNIG00000014219	prpf19	76	96.396	Tetraodon_nigroviridis
ENSHCOG00000016720	prpf19	100	83.366	ENSTTRG00000012476	PRPF19	100	83.366	Tursiops_truncatus
ENSHCOG00000016720	prpf19	100	83.366	ENSUAMG00000011280	PRPF19	100	83.366	Ursus_americanus
ENSHCOG00000016720	prpf19	87	80.378	ENSUMAG00000011609	PRPF19	83	82.979	Ursus_maritimus
ENSHCOG00000016720	prpf19	99	84.615	ENSVPAG00000010516	PRPF19	100	84.615	Vicugna_pacos
ENSHCOG00000016720	prpf19	100	83.366	ENSVVUG00000005291	PRPF19	100	83.366	Vulpes_vulpes
ENSHCOG00000016720	prpf19	100	78.864	ENSXETG00000011938	prpf19	100	78.864	Xenopus_tropicalis
ENSHCOG00000016720	prpf19	100	93.267	ENSXCOG00000003141	prpf19	100	93.267	Xiphophorus_couchianus
ENSHCOG00000016720	prpf19	100	93.465	ENSXMAG00000008485	prpf19	100	93.465	Xiphophorus_maculatus