EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000016756 (Gene tree)
Gene ID: 109522042
Gene Symbol: opa1
Alias: fk62d06|wu:fb77a10|wu:fk62d06|zgc:92092
Full Name: OPA1%2C mitochondrial dynamin like GTPase
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 22635 bases
Position: chrKV880135.1:2114742-2137376
Accession: 109522042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000013477	MMR_HSR1	PF01926.23	2.7e-05	1	1
ENSHCOP00000026060	MMR_HSR1	PF01926.23	3.1e-05	1	1
ENSHCOP00000013484	MMR_HSR1	PF01926.23	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000020839	-	4462	XM_019880241	ENSHCOP00000013484	998 (aa)	XP_019735800	-
ENSHCOT00000020827	-	4411	XM_019880244	ENSHCOP00000026060	981 (aa)	XP_019735803	UPI00094E3709
ENSHCOT00000020817	-	2829	-	ENSHCOP00000013477	942 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000016756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000016756's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000016756	opa1	99	96.941	ENSAPOG00000011980	opa1	100	94.004	Acanthochromis_polyacanthus
ENSHCOG00000016756	opa1	97	94.072	ENSACIG00000012521	opa1	97	94.072	Amphilophus_citrinellus
ENSHCOG00000016756	opa1	99	97.074	ENSAOCG00000020559	opa1	100	94.004	Amphiprion_ocellaris
ENSHCOG00000016756	opa1	98	93.801	ENSAPEG00000001641	opa1	100	93.902	Amphiprion_percula
ENSHCOG00000016756	opa1	98	90.083	ENSAMXG00000012295	opa1	99	91.629	Astyanax_mexicanus
ENSHCOG00000016756	opa1	91	51.947	WBGene00001134	eat-3	93	52.713	Caenorhabditis_elegans
ENSHCOG00000016756	opa1	97	86.681	ENSCSEG00000014266	opa1	97	86.681	Cynoglossus_semilaevis
ENSHCOG00000016756	opa1	99	95.745	ENSCVAG00000002438	opa1	100	88.178	Cyprinodon_variegatus
ENSHCOG00000016756	opa1	98	89.876	ENSDARG00000070801	opa1	100	89.669	Danio_rerio
ENSHCOG00000016756	opa1	95	54.365	FBgn0261276	Opa1	91	56.047	Drosophila_melanogaster
ENSHCOG00000016756	opa1	97	88.352	ENSFHEG00000003616	opa1	97	94.891	Fundulus_heteroclitus
ENSHCOG00000016756	opa1	98	93.685	ENSGACG00000009278	opa1	100	93.685	Gasterosteus_aculeatus
ENSHCOG00000016756	opa1	96	94.180	ENSHBUG00000005897	opa1	99	94.180	Haplochromis_burtoni
ENSHCOG00000016756	opa1	78	94.966	ENSKMAG00000009415	opa1	96	94.244	Kryptolebias_marmoratus
ENSHCOG00000016756	opa1	96	88.599	ENSMMOG00000008891	opa1	97	88.708	Mola_mola
ENSHCOG00000016756	opa1	99	94.947	ENSMALG00000016968	opa1	100	91.870	Monopterus_albus
ENSHCOG00000016756	opa1	97	93.764	ENSNBRG00000020394	opa1	98	93.764	Neolamprologus_brichardi
ENSHCOG00000016756	opa1	99	91.090	ENSPKIG00000003379	opa1	100	83.198	Paramormyrops_kingsleyae
ENSHCOG00000016756	opa1	99	76.525	ENSPKIG00000006473	OPA1	99	77.073	Paramormyrops_kingsleyae
ENSHCOG00000016756	opa1	97	93.846	ENSPNYG00000021747	opa1	98	93.846	Pundamilia_nyererei
ENSHCOG00000016756	opa1	98	90.186	ENSPNAG00000001917	opa1	100	89.979	Pygocentrus_nattereri
ENSHCOG00000016756	opa1	98	80.495	ENSSFOG00015009303	OPA1	97	81.551	Scleropages_formosus
ENSHCOG00000016756	opa1	96	92.248	ENSSMAG00000001797	opa1	97	92.248	Scophthalmus_maximus
ENSHCOG00000016756	opa1	75	94.828	ENSSDUG00000004968	opa1	99	94.828	Seriola_dumerili
ENSHCOG00000016756	opa1	99	96.410	ENSSLDG00000011089	opa1	100	88.889	Seriola_lalandi_dorsalis
ENSHCOG00000016756	opa1	98	94.824	ENSSPAG00000018388	opa1	100	94.824	Stegastes_partitus
ENSHCOG00000016756	opa1	78	90.413	ENSXCOG00000003267	opa1	93	90.413	Xiphophorus_couchianus
ENSHCOG00000016756	opa1	78	94.317	ENSXMAG00000005593	opa1	99	94.340	Xiphophorus_maculatus