EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000016834 (Gene tree)
Gene ID: 109507656
Gene Symbol: edc3
Alias: im:7151288|lsm16|wu:fb82d07|yjdc|zgc:112006
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 5587 bases
Position: chrKV880484.1:1119259-1124845
Accession: 109507656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000026208	FDF	PF09532.10	8.1e-10	1	1
ENSHCOP00000026208	LSM14	PF12701.7	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000021047	-	3234	XM_019857260	ENSHCOP00000026208	474 (aa)	XP_019712819	UPI00094E8508

Gene Model

Click here to download ENSHCOG00000016834's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000016834's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000016834	edc3	100	67.906	ENSG00000179151	EDC3	100	79.630	Homo_sapiens
ENSHCOG00000016834	edc3	100	89.792	ENSAPOG00000010791	edc3	100	89.792	Acanthochromis_polyacanthus
ENSHCOG00000016834	edc3	100	58.835	ENSAPOG00000008655	EDC3	100	58.032	Acanthochromis_polyacanthus
ENSHCOG00000016834	edc3	100	68.493	ENSAMEG00000008963	EDC3	100	67.319	Ailuropoda_melanoleuca
ENSHCOG00000016834	edc3	100	86.875	ENSACIG00000017751	edc3	100	86.875	Amphilophus_citrinellus
ENSHCOG00000016834	edc3	99	63.473	ENSACIG00000005330	EDC3	99	63.911	Amphilophus_citrinellus
ENSHCOG00000016834	edc3	100	65.000	ENSAOCG00000009103	-	100	64.583	Amphiprion_ocellaris
ENSHCOG00000016834	edc3	100	90.208	ENSAOCG00000005431	edc3	100	90.208	Amphiprion_ocellaris
ENSHCOG00000016834	edc3	100	90.208	ENSAPEG00000000968	edc3	100	90.208	Amphiprion_percula
ENSHCOG00000016834	edc3	100	65.417	ENSAPEG00000007841	EDC3	100	64.792	Amphiprion_percula
ENSHCOG00000016834	edc3	100	66.112	ENSATEG00000004205	-	100	65.638	Anabas_testudineus
ENSHCOG00000016834	edc3	100	88.958	ENSATEG00000015505	edc3	100	88.958	Anabas_testudineus
ENSHCOG00000016834	edc3	89	66.886	ENSAPLG00000008957	EDC3	87	72.180	Anas_platyrhynchos
ENSHCOG00000016834	edc3	77	66.080	ENSACAG00000000460	-	100	64.500	Anolis_carolinensis
ENSHCOG00000016834	edc3	100	67.906	ENSANAG00000024078	EDC3	100	67.773	Aotus_nancymaae
ENSHCOG00000016834	edc3	99	64.854	ENSACLG00000018776	-	99	63.750	Astatotilapia_calliptera
ENSHCOG00000016834	edc3	100	86.458	ENSACLG00000007232	edc3	100	86.458	Astatotilapia_calliptera
ENSHCOG00000016834	edc3	100	79.051	ENSAMXG00000001589	edc3	100	78.458	Astyanax_mexicanus
ENSHCOG00000016834	edc3	100	68.689	ENSBTAG00000007308	EDC3	100	67.319	Bos_taurus
ENSHCOG00000016834	edc3	100	67.906	ENSCJAG00000017681	EDC3	100	67.773	Callithrix_jacchus
ENSHCOG00000016834	edc3	100	68.493	ENSCAFG00000017935	EDC3	100	67.319	Canis_familiaris
ENSHCOG00000016834	edc3	100	68.493	ENSCAFG00020003909	EDC3	100	67.319	Canis_lupus_dingo
ENSHCOG00000016834	edc3	100	68.885	ENSCHIG00000023658	EDC3	100	67.515	Capra_hircus
ENSHCOG00000016834	edc3	100	68.493	ENSTSYG00000004822	EDC3	100	66.928	Carlito_syrichta
ENSHCOG00000016834	edc3	100	68.689	ENSCPOG00000015595	EDC3	100	68.555	Cavia_porcellus
ENSHCOG00000016834	edc3	100	67.710	ENSCCAG00000021663	EDC3	100	67.578	Cebus_capucinus
ENSHCOG00000016834	edc3	100	68.102	ENSCATG00000037511	EDC3	100	67.969	Cercocebus_atys
ENSHCOG00000016834	edc3	100	68.493	ENSCLAG00000005700	EDC3	100	68.359	Chinchilla_lanigera
ENSHCOG00000016834	edc3	100	68.102	ENSCSAG00000014239	EDC3	100	67.969	Chlorocebus_sabaeus
ENSHCOG00000016834	edc3	100	68.689	ENSCPBG00000024239	EDC3	100	67.123	Chrysemys_picta_bellii
ENSHCOG00000016834	edc3	100	37.427	ENSCING00000022142	-	99	37.427	Ciona_intestinalis
ENSHCOG00000016834	edc3	100	68.102	ENSCANG00000028699	EDC3	100	67.969	Colobus_angolensis_palliatus
ENSHCOG00000016834	edc3	100	68.102	ENSCGRG00001013874	Edc3	100	67.969	Cricetulus_griseus_chok1gshd
ENSHCOG00000016834	edc3	100	68.102	ENSCGRG00000011885	Edc3	100	67.969	Cricetulus_griseus_crigri
ENSHCOG00000016834	edc3	99	86.848	ENSCSEG00000012996	edc3	99	86.848	Cynoglossus_semilaevis
ENSHCOG00000016834	edc3	100	88.125	ENSCVAG00000008023	edc3	100	88.125	Cyprinodon_variegatus
ENSHCOG00000016834	edc3	99	75.099	ENSDARG00000051931	edc3	99	74.704	Danio_rerio
ENSHCOG00000016834	edc3	100	59.188	ENSDNOG00000030661	EDC3	100	59.188	Dasypus_novemcinctus
ENSHCOG00000016834	edc3	69	79.630	ENSETEG00000002398	-	64	79.630	Echinops_telfairi
ENSHCOG00000016834	edc3	100	67.710	ENSEASG00005005071	EDC3	100	66.536	Equus_asinus_asinus
ENSHCOG00000016834	edc3	100	67.710	ENSECAG00000017994	EDC3	100	66.536	Equus_caballus
ENSHCOG00000016834	edc3	100	78.926	ENSELUG00000005794	edc3	100	78.719	Esox_lucius
ENSHCOG00000016834	edc3	100	69.087	ENSELUG00000007607	EDC3	100	69.087	Esox_lucius
ENSHCOG00000016834	edc3	100	68.689	ENSFCAG00000002014	EDC3	100	68.555	Felis_catus
ENSHCOG00000016834	edc3	98	66.000	ENSFALG00000004543	EDC3	96	65.000	Ficedula_albicollis
ENSHCOG00000016834	edc3	100	68.297	ENSFDAG00000012582	EDC3	100	68.164	Fukomys_damarensis
ENSHCOG00000016834	edc3	100	88.125	ENSFHEG00000009375	edc3	100	88.125	Fundulus_heteroclitus
ENSHCOG00000016834	edc3	100	83.784	ENSGMOG00000002715	edc3	100	83.784	Gadus_morhua
ENSHCOG00000016834	edc3	100	68.173	ENSGALG00000040181	EDC3	100	67.387	Gallus_gallus
ENSHCOG00000016834	edc3	100	86.042	ENSGAFG00000014433	edc3	100	86.042	Gambusia_affinis
ENSHCOG00000016834	edc3	100	85.625	ENSGACG00000009783	edc3	100	85.625	Gasterosteus_aculeatus
ENSHCOG00000016834	edc3	99	59.725	ENSGACG00000014671	EDC3	99	59.725	Gasterosteus_aculeatus
ENSHCOG00000016834	edc3	100	68.959	ENSGAGG00000023477	EDC3	100	68.369	Gopherus_agassizii
ENSHCOG00000016834	edc3	100	67.906	ENSGGOG00000003552	EDC3	100	67.773	Gorilla_gorilla
ENSHCOG00000016834	edc3	99	65.063	ENSHBUG00000020817	EDC3	99	63.958	Haplochromis_burtoni
ENSHCOG00000016834	edc3	100	86.458	ENSHBUG00000003635	edc3	100	86.458	Haplochromis_burtoni
ENSHCOG00000016834	edc3	99	77.200	ENSIPUG00000005695	edc3	100	76.400	Ictalurus_punctatus
ENSHCOG00000016834	edc3	100	67.906	ENSSTOG00000013936	EDC3	100	67.906	Ictidomys_tridecemlineatus
ENSHCOG00000016834	edc3	100	68.102	ENSJJAG00000008074	Edc3	100	67.969	Jaculus_jaculus
ENSHCOG00000016834	edc3	100	63.883	ENSKMAG00000001987	EDC3	100	63.466	Kryptolebias_marmoratus
ENSHCOG00000016834	edc3	100	86.902	ENSKMAG00000001243	edc3	100	86.694	Kryptolebias_marmoratus
ENSHCOG00000016834	edc3	100	89.375	ENSLBEG00000013435	edc3	99	89.375	Labrus_bergylta
ENSHCOG00000016834	edc3	100	63.374	ENSLBEG00000017984	EDC3	100	63.374	Labrus_bergylta
ENSHCOG00000016834	edc3	100	70.543	ENSLACG00000014149	EDC3	100	70.349	Latimeria_chalumnae
ENSHCOG00000016834	edc3	99	72.470	ENSLOCG00000014625	edc3	99	72.672	Lepisosteus_oculatus
ENSHCOG00000016834	edc3	100	68.824	ENSLAFG00000002992	EDC3	100	68.235	Loxodonta_africana
ENSHCOG00000016834	edc3	100	68.297	ENSMFAG00000043074	EDC3	100	68.164	Macaca_fascicularis
ENSHCOG00000016834	edc3	100	68.297	ENSMMUG00000011071	EDC3	100	68.164	Macaca_mulatta
ENSHCOG00000016834	edc3	100	68.297	ENSMNEG00000035316	EDC3	100	68.164	Macaca_nemestrina
ENSHCOG00000016834	edc3	100	68.102	ENSMLEG00000030372	EDC3	100	67.969	Mandrillus_leucophaeus
ENSHCOG00000016834	edc3	100	88.750	ENSMAMG00000000505	edc3	100	88.750	Mastacembelus_armatus
ENSHCOG00000016834	edc3	99	64.226	ENSMAMG00000005423	-	99	64.226	Mastacembelus_armatus
ENSHCOG00000016834	edc3	100	64.803	ENSMZEG00005005654	EDC3	99	64.938	Maylandia_zebra
ENSHCOG00000016834	edc3	100	86.250	ENSMZEG00005004892	edc3	100	86.250	Maylandia_zebra
ENSHCOG00000016834	edc3	100	67.976	ENSMGAG00000002617	EDC3	100	67.191	Meleagris_gallopavo
ENSHCOG00000016834	edc3	100	67.123	ENSMICG00000043190	EDC3	100	67.123	Microcebus_murinus
ENSHCOG00000016834	edc3	100	67.906	ENSMOCG00000016205	Edc3	100	67.773	Microtus_ochrogaster
ENSHCOG00000016834	edc3	99	89.353	ENSMMOG00000012278	edc3	99	89.353	Mola_mola
ENSHCOG00000016834	edc3	100	68.493	ENSMODG00000009442	EDC3	100	68.493	Monodelphis_domestica
ENSHCOG00000016834	edc3	100	87.708	ENSMALG00000008658	edc3	100	87.708	Monopterus_albus
ENSHCOG00000016834	edc3	100	67.515	MGP_CAROLIEiJ_G0032280	Edc3	100	77.193	Mus_caroli
ENSHCOG00000016834	edc3	100	67.710	ENSMUSG00000038957	Edc3	100	77.193	Mus_musculus
ENSHCOG00000016834	edc3	100	67.710	MGP_PahariEiJ_G0015146	Edc3	100	77.193	Mus_pahari
ENSHCOG00000016834	edc3	100	67.710	MGP_SPRETEiJ_G0033420	Edc3	100	77.193	Mus_spretus
ENSHCOG00000016834	edc3	100	68.689	ENSMPUG00000017293	EDC3	100	68.555	Mustela_putorius_furo
ENSHCOG00000016834	edc3	100	68.226	ENSMLUG00000016382	EDC3	100	68.093	Myotis_lucifugus
ENSHCOG00000016834	edc3	100	67.906	ENSNGAG00000010923	Edc3	100	67.578	Nannospalax_galili
ENSHCOG00000016834	edc3	99	64.938	ENSNBRG00000007881	EDC3	99	64.938	Neolamprologus_brichardi
ENSHCOG00000016834	edc3	100	86.042	ENSNBRG00000002434	edc3	100	86.042	Neolamprologus_brichardi
ENSHCOG00000016834	edc3	100	58.708	ENSNLEG00000014577	EDC3	100	58.594	Nomascus_leucogenys
ENSHCOG00000016834	edc3	100	68.369	ENSMEUG00000009077	EDC3	100	67.583	Notamacropus_eugenii
ENSHCOG00000016834	edc3	84	79.630	ENSOPRG00000009540	-	79	79.630	Ochotona_princeps
ENSHCOG00000016834	edc3	100	86.667	ENSONIG00000008434	edc3	100	86.667	Oreochromis_niloticus
ENSHCOG00000016834	edc3	100	60.425	ENSONIG00000002932	-	99	60.542	Oreochromis_niloticus
ENSHCOG00000016834	edc3	77	66.165	ENSOCUG00000017740	EDC3	86	64.662	Oryctolagus_cuniculus
ENSHCOG00000016834	edc3	100	62.630	ENSORLG00000014399	-	98	62.630	Oryzias_latipes
ENSHCOG00000016834	edc3	100	85.239	ENSORLG00000004883	edc3	100	85.239	Oryzias_latipes
ENSHCOG00000016834	edc3	100	85.447	ENSORLG00020012262	edc3	100	85.447	Oryzias_latipes_hni
ENSHCOG00000016834	edc3	100	62.630	ENSORLG00020019446	-	100	62.630	Oryzias_latipes_hni
ENSHCOG00000016834	edc3	100	62.422	ENSORLG00015017635	-	96	62.422	Oryzias_latipes_hsok
ENSHCOG00000016834	edc3	100	85.239	ENSORLG00015005634	edc3	100	85.239	Oryzias_latipes_hsok
ENSHCOG00000016834	edc3	100	63.958	ENSOMEG00000017354	EDC3	100	63.542	Oryzias_melastigma
ENSHCOG00000016834	edc3	100	85.625	ENSOMEG00000014026	edc3	100	85.625	Oryzias_melastigma
ENSHCOG00000016834	edc3	100	67.515	ENSOGAG00000014441	EDC3	100	67.969	Otolemur_garnettii
ENSHCOG00000016834	edc3	100	68.164	ENSOARG00000003476	EDC3	100	67.188	Ovis_aries
ENSHCOG00000016834	edc3	100	67.906	ENSPPAG00000040143	EDC3	100	67.773	Pan_paniscus
ENSHCOG00000016834	edc3	100	68.689	ENSPPRG00000006257	EDC3	100	68.555	Panthera_pardus
ENSHCOG00000016834	edc3	100	68.689	ENSPTIG00000017424	EDC3	100	68.555	Panthera_tigris_altaica
ENSHCOG00000016834	edc3	100	67.906	ENSPTRG00000007279	EDC3	100	67.773	Pan_troglodytes
ENSHCOG00000016834	edc3	100	68.102	ENSPANG00000015997	EDC3	100	67.969	Papio_anubis
ENSHCOG00000016834	edc3	100	73.913	ENSPKIG00000004416	edc3	100	72.925	Paramormyrops_kingsleyae
ENSHCOG00000016834	edc3	100	74.545	ENSPKIG00000019810	EDC3	100	74.545	Paramormyrops_kingsleyae
ENSHCOG00000016834	edc3	100	64.579	ENSPSIG00000008474	EDC3	100	63.601	Pelodiscus_sinensis
ENSHCOG00000016834	edc3	100	85.833	ENSPMGG00000007223	edc3	100	85.833	Periophthalmus_magnuspinnatus
ENSHCOG00000016834	edc3	100	68.102	ENSPEMG00000015260	Edc3	100	67.969	Peromyscus_maniculatus_bairdii
ENSHCOG00000016834	edc3	99	68.307	ENSPCIG00000006276	EDC3	70	67.717	Phascolarctos_cinereus
ENSHCOG00000016834	edc3	100	87.500	ENSPFOG00000012204	edc3	100	87.500	Poecilia_formosa
ENSHCOG00000016834	edc3	100	87.500	ENSPLAG00000014420	edc3	100	87.500	Poecilia_latipinna
ENSHCOG00000016834	edc3	100	87.500	ENSPMEG00000023289	edc3	100	87.500	Poecilia_mexicana
ENSHCOG00000016834	edc3	100	87.500	ENSPREG00000016022	edc3	100	87.500	Poecilia_reticulata
ENSHCOG00000016834	edc3	100	67.123	ENSPPYG00000006642	EDC3	100	66.992	Pongo_abelii
ENSHCOG00000016834	edc3	90	79.630	ENSPCAG00000002802	EDC3	84	79.630	Procavia_capensis
ENSHCOG00000016834	edc3	100	68.493	ENSPCOG00000013364	EDC3	100	68.359	Propithecus_coquereli
ENSHCOG00000016834	edc3	100	67.319	ENSPVAG00000014733	EDC3	100	67.319	Pteropus_vampyrus
ENSHCOG00000016834	edc3	100	86.458	ENSPNYG00000021797	edc3	100	86.458	Pundamilia_nyererei
ENSHCOG00000016834	edc3	99	65.063	ENSPNYG00000009669	EDC3	99	63.958	Pundamilia_nyererei
ENSHCOG00000016834	edc3	100	78.458	ENSPNAG00000019657	edc3	100	77.668	Pygocentrus_nattereri
ENSHCOG00000016834	edc3	99	67.520	ENSRNOG00000019579	Edc3	99	67.780	Rattus_norvegicus
ENSHCOG00000016834	edc3	100	68.102	ENSRBIG00000019488	EDC3	100	67.969	Rhinopithecus_bieti
ENSHCOG00000016834	edc3	100	68.102	ENSRROG00000034959	EDC3	100	67.969	Rhinopithecus_roxellana
ENSHCOG00000016834	edc3	100	67.710	ENSSBOG00000004896	EDC3	100	67.578	Saimiri_boliviensis_boliviensis
ENSHCOG00000016834	edc3	99	66.008	ENSSHAG00000015075	EDC3	98	65.020	Sarcophilus_harrisii
ENSHCOG00000016834	edc3	100	72.917	ENSSFOG00015002439	edc3	100	72.917	Scleropages_formosus
ENSHCOG00000016834	edc3	100	76.541	ENSSFOG00015016939	edc3	100	75.944	Scleropages_formosus
ENSHCOG00000016834	edc3	100	88.125	ENSSMAG00000010695	edc3	100	88.125	Scophthalmus_maximus
ENSHCOG00000016834	edc3	99	64.124	ENSSMAG00000010176	-	99	63.711	Scophthalmus_maximus
ENSHCOG00000016834	edc3	100	68.125	ENSSDUG00000007671	EDC3	100	68.125	Seriola_dumerili
ENSHCOG00000016834	edc3	100	90.417	ENSSDUG00000021844	edc3	100	90.417	Seriola_dumerili
ENSHCOG00000016834	edc3	100	90.625	ENSSLDG00000022046	edc3	100	90.625	Seriola_lalandi_dorsalis
ENSHCOG00000016834	edc3	78	77.419	ENSSARG00000003907	EDC3	80	77.419	Sorex_araneus
ENSHCOG00000016834	edc3	100	66.536	ENSSPUG00000008232	EDC3	100	66.536	Sphenodon_punctatus
ENSHCOG00000016834	edc3	100	88.958	ENSSPAG00000010009	edc3	100	88.958	Stegastes_partitus
ENSHCOG00000016834	edc3	100	64.792	ENSSPAG00000020327	EDC3	100	65.208	Stegastes_partitus
ENSHCOG00000016834	edc3	100	70.782	ENSSSCG00000001903	EDC3	100	70.782	Sus_scrofa
ENSHCOG00000016834	edc3	100	67.976	ENSTGUG00000004007	EDC3	100	66.798	Taeniopygia_guttata
ENSHCOG00000016834	edc3	100	87.083	ENSTRUG00000017078	edc3	100	86.667	Takifugu_rubripes
ENSHCOG00000016834	edc3	100	87.137	ENSTNIG00000016047	edc3	100	87.137	Tetraodon_nigroviridis
ENSHCOG00000016834	edc3	100	68.431	ENSTTRG00000007990	EDC3	100	67.451	Tursiops_truncatus
ENSHCOG00000016834	edc3	100	68.493	ENSUAMG00000026710	-	100	67.319	Ursus_americanus
ENSHCOG00000016834	edc3	100	68.493	ENSUMAG00000005006	EDC3	96	67.319	Ursus_maritimus
ENSHCOG00000016834	edc3	84	72.222	ENSVPAG00000003499	-	79	72.222	Vicugna_pacos
ENSHCOG00000016834	edc3	100	68.297	ENSVVUG00000018601	EDC3	100	67.123	Vulpes_vulpes
ENSHCOG00000016834	edc3	73	72.650	ENSXETG00000010622	edc3	99	73.789	Xenopus_tropicalis
ENSHCOG00000016834	edc3	100	87.083	ENSXMAG00000007377	edc3	100	87.083	Xiphophorus_maculatus