EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000016860 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 1432 bases
Position: chrKV880135.1:1974793-1976224
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000013669	RRM_1	PF00076.22	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000021068	-	484	-	ENSHCOP00000013669	98 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000016860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000016860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000016860	-	94	63.043	ENSHCOG00000017228	-	86	62.366

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000016860	-	85	71.084	ENSG00000153914	SREK1	83	71.084	Homo_sapiens
ENSHCOG00000016860	-	86	80.952	ENSG00000116754	SRSF11	67	79.070	Homo_sapiens
ENSHCOG00000016860	-	99	95.876	ENSAPOG00000007244	-	70	95.876	Acanthochromis_polyacanthus
ENSHCOG00000016860	-	99	81.443	ENSAPOG00000004488	-	90	81.443	Acanthochromis_polyacanthus
ENSHCOG00000016860	-	88	65.116	ENSACIG00000015055	-	69	65.116	Amphilophus_citrinellus
ENSHCOG00000016860	-	90	92.045	ENSACIG00000012348	-	93	92.045	Amphilophus_citrinellus
ENSHCOG00000016860	-	99	81.443	ENSACIG00000018075	-	90	81.443	Amphilophus_citrinellus
ENSHCOG00000016860	-	86	88.095	ENSAOCG00000000739	-	89	88.095	Amphiprion_ocellaris
ENSHCOG00000016860	-	87	67.059	ENSAOCG00000024368	-	86	67.059	Amphiprion_ocellaris
ENSHCOG00000016860	-	99	81.443	ENSAPEG00000003619	SRSF11	90	81.443	Amphiprion_percula
ENSHCOG00000016860	-	87	96.471	ENSAPEG00000003142	SRSF11	88	96.471	Amphiprion_percula
ENSHCOG00000016860	-	85	68.675	ENSAPEG00000002218	-	90	68.675	Amphiprion_percula
ENSHCOG00000016860	-	99	81.443	ENSATEG00000007534	-	90	81.443	Anabas_testudineus
ENSHCOG00000016860	-	86	66.667	ENSATEG00000009464	-	92	66.667	Anabas_testudineus
ENSHCOG00000016860	-	95	90.526	ENSATEG00000011691	srsf11	81	95.402	Anabas_testudineus
ENSHCOG00000016860	-	85	71.084	ENSANAG00000031358	SREK1	83	71.084	Aotus_nancymaae
ENSHCOG00000016860	-	100	93.878	ENSACLG00000000623	srsf11	100	93.878	Astatotilapia_calliptera
ENSHCOG00000016860	-	85	71.084	ENSBTAG00000007321	SREK1	83	71.084	Bos_taurus
ENSHCOG00000016860	-	85	71.084	ENSCJAG00000015950	SREK1	83	71.084	Callithrix_jacchus
ENSHCOG00000016860	-	85	71.084	ENSCAFG00020019449	-	83	71.084	Canis_lupus_dingo
ENSHCOG00000016860	-	84	82.927	ENSCAFG00020017255	-	74	80.952	Canis_lupus_dingo
ENSHCOG00000016860	-	84	82.927	ENSCHIG00000025295	SRSF11	71	80.952	Capra_hircus
ENSHCOG00000016860	-	85	71.084	ENSCHIG00000025052	-	83	71.084	Capra_hircus
ENSHCOG00000016860	-	85	71.084	ENSTSYG00000036957	SREK1	83	71.084	Carlito_syrichta
ENSHCOG00000016860	-	83	77.778	ENSTSYG00000033270	-	58	75.904	Carlito_syrichta
ENSHCOG00000016860	-	85	71.084	ENSCCAG00000020591	SREK1	83	71.084	Cebus_capucinus
ENSHCOG00000016860	-	85	71.084	ENSCATG00000031482	SREK1	83	71.084	Cercocebus_atys
ENSHCOG00000016860	-	84	73.171	ENSCPBG00000026866	SREK1	63	73.171	Chrysemys_picta_bellii
ENSHCOG00000016860	-	87	76.471	ENSCPBG00000022430	-	75	76.471	Chrysemys_picta_bellii
ENSHCOG00000016860	-	85	71.084	ENSCANG00000030421	SREK1	83	71.084	Colobus_angolensis_palliatus
ENSHCOG00000016860	-	87	67.059	ENSCSEG00000013934	-	90	65.823	Cynoglossus_semilaevis
ENSHCOG00000016860	-	91	62.921	ENSCVAG00000002404	-	72	62.921	Cyprinodon_variegatus
ENSHCOG00000016860	-	87	87.059	ENSDARG00000098574	srsf11	96	83.908	Danio_rerio
ENSHCOG00000016860	-	84	70.732	ENSDORG00000023160	-	62	70.732	Dipodomys_ordii
ENSHCOG00000016860	-	84	82.927	ENSEASG00005007847	SRSF11	74	80.952	Equus_asinus_asinus
ENSHCOG00000016860	-	85	71.084	ENSEASG00005006832	-	73	71.084	Equus_asinus_asinus
ENSHCOG00000016860	-	85	71.084	ENSECAG00000035731	-	72	71.084	Equus_caballus
ENSHCOG00000016860	-	85	69.880	ENSFCAG00000036884	-	83	69.880	Felis_catus
ENSHCOG00000016860	-	86	80.952	ENSFCAG00000034448	-	68	79.070	Felis_catus
ENSHCOG00000016860	-	91	61.798	ENSFHEG00000020959	-	69	61.798	Fundulus_heteroclitus
ENSHCOG00000016860	-	85	72.289	ENSGALG00000043541	SREK1	84	72.289	Gallus_gallus
ENSHCOG00000016860	-	84	67.073	ENSGAFG00000001732	-	67	67.073	Gambusia_affinis
ENSHCOG00000016860	-	84	73.171	ENSGAGG00000006087	SREK1	63	73.171	Gopherus_agassizii
ENSHCOG00000016860	-	89	80.460	ENSGAGG00000022411	-	84	80.460	Gopherus_agassizii
ENSHCOG00000016860	-	85	71.084	ENSGGOG00000004737	SREK1	83	71.084	Gorilla_gorilla
ENSHCOG00000016860	-	92	62.222	ENSHBUG00000007082	-	67	62.222	Haplochromis_burtoni
ENSHCOG00000016860	-	85	71.084	ENSSTOG00000008850	SREK1	83	71.084	Ictidomys_tridecemlineatus
ENSHCOG00000016860	-	84	69.512	ENSJJAG00000008846	-	64	69.512	Jaculus_jaculus
ENSHCOG00000016860	-	88	66.279	ENSLBEG00000022954	-	62	66.279	Labrus_bergylta
ENSHCOG00000016860	-	100	94.898	ENSLBEG00000024167	srsf11	100	94.898	Labrus_bergylta
ENSHCOG00000016860	-	85	71.084	ENSMFAG00000039823	SREK1	83	71.084	Macaca_fascicularis
ENSHCOG00000016860	-	83	71.605	ENSMMUG00000014586	SREK1	74	71.605	Macaca_mulatta
ENSHCOG00000016860	-	85	71.084	ENSMNEG00000030723	SREK1	83	71.084	Macaca_nemestrina
ENSHCOG00000016860	-	85	71.084	ENSMLEG00000039078	SREK1	83	71.084	Mandrillus_leucophaeus
ENSHCOG00000016860	-	91	61.798	ENSMAMG00000003099	-	86	61.798	Mastacembelus_armatus
ENSHCOG00000016860	-	99	81.443	ENSMAMG00000015002	-	91	81.443	Mastacembelus_armatus
ENSHCOG00000016860	-	86	63.095	ENSMZEG00005005707	-	66	63.095	Maylandia_zebra
ENSHCOG00000016860	-	85	71.084	ENSMICG00000034959	SREK1	83	71.084	Microcebus_murinus
ENSHCOG00000016860	-	99	81.443	ENSMMOG00000016751	-	90	81.443	Mola_mola
ENSHCOG00000016860	-	87	95.294	ENSMMOG00000008877	-	84	95.294	Mola_mola
ENSHCOG00000016860	-	85	63.855	ENSMALG00000017086	srek1	93	63.855	Monopterus_albus
ENSHCOG00000016860	-	100	92.857	ENSMALG00000016608	srsf11	100	92.857	Monopterus_albus
ENSHCOG00000016860	-	88	79.070	MGP_CAROLIEiJ_G0025767	Srsf11	86	79.070	Mus_caroli
ENSHCOG00000016860	-	88	79.070	ENSMUSG00000055436	Srsf11	85	79.070	Mus_musculus
ENSHCOG00000016860	-	88	79.070	MGP_PahariEiJ_G0027217	Srsf11	86	79.070	Mus_pahari
ENSHCOG00000016860	-	88	79.070	MGP_SPRETEiJ_G0026719	Srsf11	86	79.070	Mus_spretus
ENSHCOG00000016860	-	84	70.732	ENSNGAG00000014631	-	62	70.732	Nannospalax_galili
ENSHCOG00000016860	-	90	90.909	ENSNBRG00000020213	-	93	90.909	Neolamprologus_brichardi
ENSHCOG00000016860	-	92	62.222	ENSNBRG00000010656	-	67	62.222	Neolamprologus_brichardi
ENSHCOG00000016860	-	85	71.084	ENSNLEG00000003827	SREK1	83	71.084	Nomascus_leucogenys
ENSHCOG00000016860	-	84	71.951	ENSODEG00000016218	-	79	71.605	Octodon_degus
ENSHCOG00000016860	-	85	63.855	ENSORLG00000002711	-	69	63.855	Oryzias_latipes
ENSHCOG00000016860	-	100	82.653	ENSORLG00000030366	-	87	82.653	Oryzias_latipes
ENSHCOG00000016860	-	100	82.653	ENSORLG00020009393	-	87	82.653	Oryzias_latipes_hni
ENSHCOG00000016860	-	96	60.638	ENSORLG00020012815	-	67	63.636	Oryzias_latipes_hni
ENSHCOG00000016860	-	100	82.653	ENSORLG00015009374	-	87	82.653	Oryzias_latipes_hsok
ENSHCOG00000016860	-	85	67.470	ENSORLG00015020455	-	65	67.470	Oryzias_latipes_hsok
ENSHCOG00000016860	-	84	71.951	ENSPPAG00000031605	SREK1	74	71.605	Pan_paniscus
ENSHCOG00000016860	-	85	69.880	ENSPPRG00000024617	SREK1	83	69.880	Panthera_pardus
ENSHCOG00000016860	-	85	69.880	ENSPTIG00000006608	SREK1	83	69.880	Panthera_tigris_altaica
ENSHCOG00000016860	-	85	71.084	ENSPTRG00000016936	SREK1	83	71.084	Pan_troglodytes
ENSHCOG00000016860	-	85	71.084	ENSPANG00000008953	SREK1	83	71.084	Papio_anubis
ENSHCOG00000016860	-	90	88.636	ENSPKIG00000021576	-	93	88.636	Paramormyrops_kingsleyae
ENSHCOG00000016860	-	88	89.535	ENSPMGG00000000954	-	81	89.535	Periophthalmus_magnuspinnatus
ENSHCOG00000016860	-	84	69.512	ENSPMGG00000017029	-	71	69.512	Periophthalmus_magnuspinnatus
ENSHCOG00000016860	-	87	87.059	ENSPMGG00000005045	-	75	87.059	Periophthalmus_magnuspinnatus
ENSHCOG00000016860	-	84	67.073	ENSPLAG00000014609	-	60	67.073	Poecilia_latipinna
ENSHCOG00000016860	-	93	85.714	ENSPLAG00000009484	-	63	85.714	Poecilia_latipinna
ENSHCOG00000016860	-	84	67.073	ENSPLAG00000008818	-	60	67.073	Poecilia_latipinna
ENSHCOG00000016860	-	84	67.073	ENSPMEG00000006607	-	60	67.073	Poecilia_mexicana
ENSHCOG00000016860	-	84	67.073	ENSPMEG00000006824	-	60	67.073	Poecilia_mexicana
ENSHCOG00000016860	-	88	93.023	ENSPMEG00000018837	srsf11	70	93.023	Poecilia_mexicana
ENSHCOG00000016860	-	93	85.714	ENSPMEG00000023453	-	63	85.714	Poecilia_mexicana
ENSHCOG00000016860	-	90	63.636	ENSPREG00000019922	-	70	63.636	Poecilia_reticulata
ENSHCOG00000016860	-	85	71.084	ENSPCOG00000026230	SREK1	83	71.084	Propithecus_coquereli
ENSHCOG00000016860	-	92	62.222	ENSPNYG00000007178	-	67	62.222	Pundamilia_nyererei
ENSHCOG00000016860	-	85	71.084	ENSRBIG00000033818	SREK1	83	71.084	Rhinopithecus_bieti
ENSHCOG00000016860	-	84	82.927	ENSRBIG00000042971	SRSF11	65	80.952	Rhinopithecus_bieti
ENSHCOG00000016860	-	85	71.084	ENSRROG00000017210	SREK1	83	71.084	Rhinopithecus_roxellana
ENSHCOG00000016860	-	84	82.927	ENSSBOG00000033461	SRSF11	65	80.952	Saimiri_boliviensis_boliviensis
ENSHCOG00000016860	-	85	71.084	ENSSBOG00000031230	SREK1	83	71.084	Saimiri_boliviensis_boliviensis
ENSHCOG00000016860	-	80	89.744	ENSSFOG00015016086	-	71	89.744	Scleropages_formosus
ENSHCOG00000016860	-	87	65.882	ENSSDUG00000010395	-	84	65.882	Seriola_dumerili
ENSHCOG00000016860	-	87	65.882	ENSSLDG00000016285	-	84	65.882	Seriola_lalandi_dorsalis
ENSHCOG00000016860	-	100	95.918	ENSSLDG00000015477	-	100	95.918	Seriola_lalandi_dorsalis
ENSHCOG00000016860	-	99	81.443	ENSSLDG00000012105	-	90	81.443	Seriola_lalandi_dorsalis
ENSHCOG00000016860	-	87	88.235	ENSSPAG00000016483	-	68	88.235	Stegastes_partitus
ENSHCOG00000016860	-	87	67.059	ENSSPAG00000022310	-	86	67.059	Stegastes_partitus
ENSHCOG00000016860	-	88	62.791	ENSTRUG00000022058	-	70	62.791	Takifugu_rubripes
ENSHCOG00000016860	-	83	71.605	ENSUAMG00000022662	-	74	71.605	Ursus_americanus
ENSHCOG00000016860	-	84	82.927	ENSUAMG00000008403	-	65	82.143	Ursus_americanus
ENSHCOG00000016860	-	85	71.084	ENSVVUG00000005888	-	83	71.084	Vulpes_vulpes
ENSHCOG00000016860	-	84	67.073	ENSXCOG00000017792	-	64	67.073	Xiphophorus_couchianus
ENSHCOG00000016860	-	87	88.235	ENSXCOG00000015127	-	91	88.235	Xiphophorus_couchianus
ENSHCOG00000016860	-	86	95.238	ENSXCOG00000003220	-	72	95.238	Xiphophorus_couchianus
ENSHCOG00000016860	-	84	67.073	ENSXMAG00000028210	-	67	67.073	Xiphophorus_maculatus
ENSHCOG00000016860	-	93	85.714	ENSXMAG00000019180	SRSF11	60	85.714	Xiphophorus_maculatus
ENSHCOG00000016860	-	79	31.646	ENSXMAG00000027782	-	71	31.646	Xiphophorus_maculatus