EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000016924 (Gene tree)
Gene ID: 109530149
Gene Symbol: ercc3
Alias: wu:fc25f08|xpb
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 5208 bases
Position: chrKV880390.1:187886-193093
Accession: 109530149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000013695	ResIII	PF04851.15	6.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027401	-	2878	XM_019893716	ENSHCOP00000013695	782 (aa)	XP_019749275	UPI00094E2CF4

Gene Model

Click here to download ENSHCOG00000016924's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03022	Basal transcription factors	KEGG
hcq03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000016924's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000016924	ercc3	100	87.006	ENSG00000163161	ERCC3	99	96.273	Homo_sapiens
ENSHCOG00000016924	ercc3	100	93.359	ENSAPOG00000014383	ercc3	100	93.231	Acanthochromis_polyacanthus
ENSHCOG00000016924	ercc3	100	87.023	ENSAMEG00000016840	ERCC3	100	87.134	Ailuropoda_melanoleuca
ENSHCOG00000016924	ercc3	99	92.516	ENSACIG00000000126	ercc3	100	92.387	Amphilophus_citrinellus
ENSHCOG00000016924	ercc3	100	93.231	ENSAOCG00000009396	ercc3	100	93.231	Amphiprion_ocellaris
ENSHCOG00000016924	ercc3	100	93.103	ENSAPEG00000023077	ercc3	100	93.103	Amphiprion_percula
ENSHCOG00000016924	ercc3	100	93.359	ENSATEG00000014860	ercc3	100	93.359	Anabas_testudineus
ENSHCOG00000016924	ercc3	91	87.887	ENSAPLG00000012068	ERCC3	98	87.746	Anas_platyrhynchos
ENSHCOG00000016924	ercc3	92	87.933	ENSACAG00000009919	ERCC3	100	87.933	Anolis_carolinensis
ENSHCOG00000016924	ercc3	100	86.879	ENSANAG00000031091	ERCC3	100	86.624	Aotus_nancymaae
ENSHCOG00000016924	ercc3	100	93.359	ENSACLG00000022508	ercc3	100	93.231	Astatotilapia_calliptera
ENSHCOG00000016924	ercc3	100	90.537	ENSAMXG00000036947	ercc3	100	90.537	Astyanax_mexicanus
ENSHCOG00000016924	ercc3	100	86.752	ENSBTAG00000020777	ERCC3	100	86.624	Bos_taurus
ENSHCOG00000016924	ercc3	99	62.782	WBGene00013441	xpb-1	97	63.437	Caenorhabditis_elegans
ENSHCOG00000016924	ercc3	100	87.006	ENSCJAG00000010416	ERCC3	100	86.752	Callithrix_jacchus
ENSHCOG00000016924	ercc3	97	87.731	ENSCAFG00000004497	ERCC3	100	86.862	Canis_familiaris
ENSHCOG00000016924	ercc3	97	87.731	ENSCAFG00020003495	ERCC3	100	86.862	Canis_lupus_dingo
ENSHCOG00000016924	ercc3	100	87.006	ENSCHIG00000014551	ERCC3	100	86.879	Capra_hircus
ENSHCOG00000016924	ercc3	99	86.434	ENSTSYG00000004137	ERCC3	99	86.305	Carlito_syrichta
ENSHCOG00000016924	ercc3	78	79.542	ENSCAPG00000017027	ERCC3	93	79.119	Cavia_aperea
ENSHCOG00000016924	ercc3	100	85.732	ENSCPOG00000002144	ERCC3	100	85.860	Cavia_porcellus
ENSHCOG00000016924	ercc3	100	87.006	ENSCCAG00000024421	ERCC3	100	86.752	Cebus_capucinus
ENSHCOG00000016924	ercc3	100	87.006	ENSCATG00000032313	ERCC3	100	86.752	Cercocebus_atys
ENSHCOG00000016924	ercc3	100	85.605	ENSCLAG00000002965	ERCC3	96	86.369	Chinchilla_lanigera
ENSHCOG00000016924	ercc3	100	86.879	ENSCSAG00000016827	ERCC3	100	86.624	Chlorocebus_sabaeus
ENSHCOG00000016924	ercc3	83	93.567	ENSCHOG00000007414	ERCC3	83	93.567	Choloepus_hoffmanni
ENSHCOG00000016924	ercc3	92	88.211	ENSCPBG00000013638	ERCC3	100	88.211	Chrysemys_picta_bellii
ENSHCOG00000016924	ercc3	96	71.447	ENSCING00000002867	ercc3	99	70.189	Ciona_intestinalis
ENSHCOG00000016924	ercc3	100	87.134	ENSCANG00000007094	ERCC3	100	86.879	Colobus_angolensis_palliatus
ENSHCOG00000016924	ercc3	100	86.752	ENSCGRG00001009426	Ercc3	100	87.006	Cricetulus_griseus_chok1gshd
ENSHCOG00000016924	ercc3	97	86.614	ENSCGRG00000015547	Ercc3	100	86.877	Cricetulus_griseus_crigri
ENSHCOG00000016924	ercc3	100	90.064	ENSCSEG00000016479	ercc3	100	90.064	Cynoglossus_semilaevis
ENSHCOG00000016924	ercc3	100	91.826	ENSCVAG00000015177	ercc3	100	91.826	Cyprinodon_variegatus
ENSHCOG00000016924	ercc3	98	91.656	ENSDARG00000002402	ercc3	100	91.443	Danio_rerio
ENSHCOG00000016924	ercc3	56	91.837	ENSDNOG00000035027	ERCC3	95	91.837	Dasypus_novemcinctus
ENSHCOG00000016924	ercc3	96	87.931	ENSDORG00000004671	Ercc3	100	86.480	Dipodomys_ordii
ENSHCOG00000016924	ercc3	99	68.130	FBgn0001179	hay	99	68.329	Drosophila_melanogaster
ENSHCOG00000016924	ercc3	90	88.376	ENSETEG00000019887	ERCC3	90	88.376	Echinops_telfairi
ENSHCOG00000016924	ercc3	99	79.140	ENSEBUG00000009773	ercc3	99	79.140	Eptatretus_burgeri
ENSHCOG00000016924	ercc3	100	84.720	ENSEASG00005022466	ERCC3	100	84.472	Equus_asinus_asinus
ENSHCOG00000016924	ercc3	100	86.879	ENSECAG00000006589	ERCC3	100	86.624	Equus_caballus
ENSHCOG00000016924	ercc3	93	86.575	ENSEEUG00000001057	ERCC3	99	86.575	Erinaceus_europaeus
ENSHCOG00000016924	ercc3	100	88.520	ENSELUG00000000089	ercc3	99	88.520	Esox_lucius
ENSHCOG00000016924	ercc3	100	86.624	ENSFCAG00000006989	ERCC3	100	86.879	Felis_catus
ENSHCOG00000016924	ercc3	99	85.954	ENSFALG00000003936	ERCC3	99	85.954	Ficedula_albicollis
ENSHCOG00000016924	ercc3	100	85.350	ENSFDAG00000011924	ERCC3	100	85.860	Fukomys_damarensis
ENSHCOG00000016924	ercc3	100	91.443	ENSFHEG00000005185	ercc3	100	91.443	Fundulus_heteroclitus
ENSHCOG00000016924	ercc3	100	87.995	ENSGMOG00000018032	ercc3	99	87.995	Gadus_morhua
ENSHCOG00000016924	ercc3	96	86.720	ENSGALG00000011515	ERCC3	100	85.459	Gallus_gallus
ENSHCOG00000016924	ercc3	100	92.209	ENSGAFG00000011936	ercc3	100	92.209	Gambusia_affinis
ENSHCOG00000016924	ercc3	100	92.611	ENSGACG00000015218	ercc3	100	92.611	Gasterosteus_aculeatus
ENSHCOG00000016924	ercc3	92	88.350	ENSGAGG00000018579	ERCC3	100	88.350	Gopherus_agassizii
ENSHCOG00000016924	ercc3	100	87.006	ENSGGOG00000015255	ERCC3	100	86.752	Gorilla_gorilla
ENSHCOG00000016924	ercc3	100	93.359	ENSHBUG00000003818	ercc3	100	93.231	Haplochromis_burtoni
ENSHCOG00000016924	ercc3	100	86.497	ENSHGLG00000011014	ERCC3	100	86.624	Heterocephalus_glaber_female
ENSHCOG00000016924	ercc3	100	86.497	ENSHGLG00100013806	ERCC3	100	86.624	Heterocephalus_glaber_male
ENSHCOG00000016924	ercc3	100	90.434	ENSIPUG00000021000	ercc3	100	90.294	Ictalurus_punctatus
ENSHCOG00000016924	ercc3	100	86.369	ENSSTOG00000011001	ERCC3	100	86.497	Ictidomys_tridecemlineatus
ENSHCOG00000016924	ercc3	90	86.864	ENSJJAG00000001117	Ercc3	100	86.582	Jaculus_jaculus
ENSHCOG00000016924	ercc3	100	91.060	ENSKMAG00000021764	ercc3	100	91.060	Kryptolebias_marmoratus
ENSHCOG00000016924	ercc3	100	92.199	ENSLBEG00000000468	ercc3	100	92.199	Labrus_bergylta
ENSHCOG00000016924	ercc3	96	82.353	ENSLACG00000014815	ERCC3	100	81.407	Latimeria_chalumnae
ENSHCOG00000016924	ercc3	90	86.441	ENSLOCG00000010907	ercc3	87	86.441	Lepisosteus_oculatus
ENSHCOG00000016924	ercc3	100	85.478	ENSLAFG00000014866	ERCC3	100	86.497	Loxodonta_africana
ENSHCOG00000016924	ercc3	100	87.006	ENSMFAG00000003370	ERCC3	100	86.752	Macaca_fascicularis
ENSHCOG00000016924	ercc3	100	83.270	ENSMNEG00000004215	ERCC3	100	82.893	Macaca_nemestrina
ENSHCOG00000016924	ercc3	100	87.006	ENSMLEG00000042061	ERCC3	100	86.752	Mandrillus_leucophaeus
ENSHCOG00000016924	ercc3	100	93.103	ENSMAMG00000004505	ercc3	99	92.976	Mastacembelus_armatus
ENSHCOG00000016924	ercc3	100	93.359	ENSMZEG00005004854	ercc3	100	93.231	Maylandia_zebra
ENSHCOG00000016924	ercc3	90	87.694	ENSMGAG00000011706	ERCC3	100	87.694	Meleagris_gallopavo
ENSHCOG00000016924	ercc3	100	86.387	ENSMAUG00000004515	Ercc3	100	86.387	Mesocricetus_auratus
ENSHCOG00000016924	ercc3	100	86.624	ENSMICG00000009578	ERCC3	100	86.752	Microcebus_murinus
ENSHCOG00000016924	ercc3	100	86.879	ENSMOCG00000021767	Ercc3	100	87.006	Microtus_ochrogaster
ENSHCOG00000016924	ercc3	99	91.860	ENSMMOG00000018174	ercc3	99	91.860	Mola_mola
ENSHCOG00000016924	ercc3	96	87.401	ENSMODG00000018695	ERCC3	100	86.879	Monodelphis_domestica
ENSHCOG00000016924	ercc3	100	92.082	ENSMALG00000014944	ercc3	100	92.082	Monopterus_albus
ENSHCOG00000016924	ercc3	100	86.497	MGP_CAROLIEiJ_G0022075	Ercc3	100	87.261	Mus_caroli
ENSHCOG00000016924	ercc3	100	86.387	ENSMUSG00000024382	Ercc3	100	87.150	Mus_musculus
ENSHCOG00000016924	ercc3	100	87.006	MGP_PahariEiJ_G0018809	Ercc3	100	87.134	Mus_pahari
ENSHCOG00000016924	ercc3	100	85.605	MGP_SPRETEiJ_G0022987	Ercc3	100	86.369	Mus_spretus
ENSHCOG00000016924	ercc3	100	87.023	ENSMPUG00000012021	ERCC3	100	87.134	Mustela_putorius_furo
ENSHCOG00000016924	ercc3	93	84.225	ENSMLUG00000007429	ERCC3	99	84.088	Myotis_lucifugus
ENSHCOG00000016924	ercc3	97	85.340	ENSNGAG00000019598	Ercc3	99	88.060	Nannospalax_galili
ENSHCOG00000016924	ercc3	100	93.359	ENSNBRG00000019074	ercc3	100	93.231	Neolamprologus_brichardi
ENSHCOG00000016924	ercc3	92	86.528	ENSNLEG00000015665	ERCC3	97	86.250	Nomascus_leucogenys
ENSHCOG00000016924	ercc3	100	84.968	ENSOPRG00000004553	ERCC3	100	84.713	Ochotona_princeps
ENSHCOG00000016924	ercc3	100	85.987	ENSODEG00000005795	ERCC3	100	86.752	Octodon_degus
ENSHCOG00000016924	ercc3	100	93.231	ENSONIG00000003255	ercc3	100	93.103	Oreochromis_niloticus
ENSHCOG00000016924	ercc3	100	86.879	ENSOCUG00000002248	ERCC3	100	86.879	Oryctolagus_cuniculus
ENSHCOG00000016924	ercc3	100	91.571	ENSORLG00000004393	ercc3	100	91.571	Oryzias_latipes
ENSHCOG00000016924	ercc3	100	91.199	ENSORLG00020017718	ercc3	100	91.199	Oryzias_latipes_hni
ENSHCOG00000016924	ercc3	100	91.315	ENSORLG00015015695	ercc3	100	91.315	Oryzias_latipes_hsok
ENSHCOG00000016924	ercc3	100	92.082	ENSOMEG00000015374	ercc3	100	91.826	Oryzias_melastigma
ENSHCOG00000016924	ercc3	100	86.404	ENSOGAG00000009103	ERCC3	100	86.404	Otolemur_garnettii
ENSHCOG00000016924	ercc3	100	86.879	ENSOARG00000016147	ERCC3	100	86.752	Ovis_aries
ENSHCOG00000016924	ercc3	100	87.006	ENSPPAG00000036166	ERCC3	100	86.752	Pan_paniscus
ENSHCOG00000016924	ercc3	100	86.752	ENSPPRG00000001305	ERCC3	100	87.006	Panthera_pardus
ENSHCOG00000016924	ercc3	92	88.350	ENSPTIG00000016969	ERCC3	100	88.350	Panthera_tigris_altaica
ENSHCOG00000016924	ercc3	100	87.006	ENSPTRG00000046940	ERCC3	100	86.752	Pan_troglodytes
ENSHCOG00000016924	ercc3	100	87.006	ENSPANG00000007699	ERCC3	100	86.752	Papio_anubis
ENSHCOG00000016924	ercc3	100	89.668	ENSPKIG00000001319	ercc3	100	90.476	Paramormyrops_kingsleyae
ENSHCOG00000016924	ercc3	92	87.933	ENSPSIG00000014682	ERCC3	100	87.933	Pelodiscus_sinensis
ENSHCOG00000016924	ercc3	96	91.102	ENSPMGG00000017885	ercc3	99	90.038	Periophthalmus_magnuspinnatus
ENSHCOG00000016924	ercc3	100	86.879	ENSPEMG00000013733	Ercc3	100	87.006	Peromyscus_maniculatus_bairdii
ENSHCOG00000016924	ercc3	90	78.992	ENSPMAG00000005081	ercc3	99	78.711	Petromyzon_marinus
ENSHCOG00000016924	ercc3	100	86.862	ENSPCIG00000011821	ERCC3	100	87.389	Phascolarctos_cinereus
ENSHCOG00000016924	ercc3	98	92.188	ENSPFOG00000015604	ercc3	100	91.826	Poecilia_formosa
ENSHCOG00000016924	ercc3	98	89.481	ENSPLAG00000022245	ercc3	100	93.204	Poecilia_latipinna
ENSHCOG00000016924	ercc3	98	92.188	ENSPMEG00000016987	ercc3	100	91.826	Poecilia_mexicana
ENSHCOG00000016924	ercc3	100	92.337	ENSPREG00000020921	ercc3	100	92.337	Poecilia_reticulata
ENSHCOG00000016924	ercc3	100	86.260	ENSPPYG00000012769	ERCC3	100	86.005	Pongo_abelii
ENSHCOG00000016924	ercc3	100	86.879	ENSPCOG00000024903	ERCC3	100	86.752	Propithecus_coquereli
ENSHCOG00000016924	ercc3	90	87.597	ENSPVAG00000013774	ERCC3	90	87.160	Pteropus_vampyrus
ENSHCOG00000016924	ercc3	100	93.359	ENSPNYG00000001208	ercc3	100	93.231	Pundamilia_nyererei
ENSHCOG00000016924	ercc3	100	90.294	ENSPNAG00000005748	ercc3	100	90.294	Pygocentrus_nattereri
ENSHCOG00000016924	ercc3	100	86.369	ENSRNOG00000013180	Ercc3	100	87.261	Rattus_norvegicus
ENSHCOG00000016924	ercc3	100	87.006	ENSRBIG00000027692	ERCC3	100	86.752	Rhinopithecus_bieti
ENSHCOG00000016924	ercc3	100	87.134	ENSRROG00000040673	ERCC3	100	86.879	Rhinopithecus_roxellana
ENSHCOG00000016924	ercc3	92	56.054	YIL143C	SSL2	85	55.782	Saccharomyces_cerevisiae
ENSHCOG00000016924	ercc3	100	86.624	ENSSBOG00000023079	ERCC3	100	86.369	Saimiri_boliviensis_boliviensis
ENSHCOG00000016924	ercc3	96	87.931	ENSSHAG00000007423	ERCC3	100	87.261	Sarcophilus_harrisii
ENSHCOG00000016924	ercc3	97	90.476	ENSSFOG00015012753	ercc3	100	89.031	Scleropages_formosus
ENSHCOG00000016924	ercc3	100	90.712	ENSSMAG00000011915	ercc3	100	90.712	Scophthalmus_maximus
ENSHCOG00000016924	ercc3	100	93.103	ENSSDUG00000021181	ercc3	100	93.103	Seriola_dumerili
ENSHCOG00000016924	ercc3	100	93.103	ENSSLDG00000008744	ercc3	98	93.103	Seriola_lalandi_dorsalis
ENSHCOG00000016924	ercc3	55	80.000	ENSSARG00000000751	-	85	80.000	Sorex_araneus
ENSHCOG00000016924	ercc3	90	86.704	ENSSPUG00000015183	ERCC3	91	86.704	Sphenodon_punctatus
ENSHCOG00000016924	ercc3	100	92.848	ENSSPAG00000004748	ercc3	100	92.848	Stegastes_partitus
ENSHCOG00000016924	ercc3	100	86.497	ENSSSCG00000015721	ERCC3	100	87.739	Sus_scrofa
ENSHCOG00000016924	ercc3	99	87.613	ENSTGUG00000004920	-	99	87.613	Taeniopygia_guttata
ENSHCOG00000016924	ercc3	100	89.783	ENSTRUG00000017185	ercc3	100	89.272	Takifugu_rubripes
ENSHCOG00000016924	ercc3	97	88.073	ENSTNIG00000005457	ercc3	99	88.111	Tetraodon_nigroviridis
ENSHCOG00000016924	ercc3	80	87.261	ENSTBEG00000009381	ERCC3	81	87.102	Tupaia_belangeri
ENSHCOG00000016924	ercc3	68	92.642	ENSUAMG00000009589	-	100	92.439	Ursus_americanus
ENSHCOG00000016924	ercc3	100	87.023	ENSUMAG00000008361	ERCC3	100	87.134	Ursus_maritimus
ENSHCOG00000016924	ercc3	92	88.504	ENSVVUG00000010431	ERCC3	100	88.350	Vulpes_vulpes
ENSHCOG00000016924	ercc3	100	85.533	ENSXETG00000033646	ercc3	100	85.660	Xenopus_tropicalis
ENSHCOG00000016924	ercc3	99	91.860	ENSXCOG00000001791	ercc3	99	91.860	Xiphophorus_couchianus
ENSHCOG00000016924	ercc3	100	92.337	ENSXMAG00000003641	ercc3	100	92.337	Xiphophorus_maculatus