EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000017047 (Gene tree)
Gene ID: 109518705
Gene Symbol: sept6
Alias: fc54b04|wu:fb70g05|wu:fc54b04|wu:fl76c07|zgc:66071
Full Name: septin 6
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 17452 bases
Position: chrKV880056.1:156682-174133
Accession: 109518705
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000013828	MMR_HSR1	PF01926.23	1.1e-07	1	1
ENSHCOP00000026269	MMR_HSR1	PF01926.23	1.1e-07	1	1
ENSHCOP00000013814	MMR_HSR1	PF01926.23	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027452	-	2353	XM_019874724	ENSHCOP00000013828	427 (aa)	XP_019730283	UPI00094EA90A
ENSHCOT00000021266	-	1827	XM_019874721	ENSHCOP00000026269	429 (aa)	XP_019730280	UPI00094EE051
ENSHCOT00000021248	-	2305	XM_019874722	ENSHCOP00000013814	431 (aa)	XP_019730281	UPI00094EA8B9

Gene Model

Click here to download ENSHCOG00000017047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017047's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000017047	sept6	68	42.809	ENSHCOG00000002966	sept9a	50	43.151
ENSHCOG00000017047	sept6	67	42.617	ENSHCOG00000005881	sept5a	80	42.617
ENSHCOG00000017047	sept6	63	42.500	ENSHCOG00000016706	SEPT4	75	42.500
ENSHCOG00000017047	sept6	70	42.444	ENSHCOG00000005893	zgc:63587	88	42.208
ENSHCOG00000017047	sept6	100	75.176	ENSHCOG00000016344	sept8a	100	75.176
ENSHCOG00000017047	sept6	69	42.053	ENSHCOG00000017892	sept9b	90	42.053
ENSHCOG00000017047	sept6	61	38.951	ENSHCOG00000016310	sept3	73	38.951
ENSHCOG00000017047	sept6	66	33.677	ENSHCOG00000009438	sept4a	83	33.677
ENSHCOG00000017047	sept6	97	37.529	ENSHCOG00000016725	sept15	98	37.762
ENSHCOG00000017047	sept6	90	38.481	ENSHCOG00000006008	sept7b	100	38.384
ENSHCOG00000017047	sept6	91	73.454	ENSHCOG00000005437	sept8b	100	73.485

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017047	sept6	100	90.443	ENSG00000125354	SEPT6	100	90.443	Homo_sapiens
ENSHCOG00000017047	sept6	100	99.063	ENSAPOG00000000347	sept6	100	99.063	Acanthochromis_polyacanthus
ENSHCOG00000017047	sept6	99	98.361	ENSACIG00000013682	sept6	100	98.361	Amphilophus_citrinellus
ENSHCOG00000017047	sept6	100	99.063	ENSAOCG00000011293	sept6	100	99.063	Amphiprion_ocellaris
ENSHCOG00000017047	sept6	100	99.063	ENSAPEG00000005460	sept6	100	99.063	Amphiprion_percula
ENSHCOG00000017047	sept6	100	98.595	ENSATEG00000018814	sept6	100	98.595	Anabas_testudineus
ENSHCOG00000017047	sept6	100	90.210	ENSANAG00000033580	SEPT6	100	90.238	Aotus_nancymaae
ENSHCOG00000017047	sept6	100	98.126	ENSACLG00000001734	sept6	100	98.126	Astatotilapia_calliptera
ENSHCOG00000017047	sept6	100	96.037	ENSAMXG00000033660	sept6	100	96.037	Astyanax_mexicanus
ENSHCOG00000017047	sept6	100	90.210	ENSCJAG00000005022	SEPT6	100	90.210	Callithrix_jacchus
ENSHCOG00000017047	sept6	100	83.683	ENSCCAG00000023266	SEPT6	100	83.683	Cebus_capucinus
ENSHCOG00000017047	sept6	100	90.443	ENSCATG00000036060	SEPT6	100	90.443	Cercocebus_atys
ENSHCOG00000017047	sept6	100	90.398	ENSCSAG00000018351	SEPT6	100	90.398	Chlorocebus_sabaeus
ENSHCOG00000017047	sept6	100	90.443	ENSCANG00000016430	SEPT6	100	90.443	Colobus_angolensis_palliatus
ENSHCOG00000017047	sept6	100	90.398	ENSCGRG00001014207	Sept6	100	90.398	Cricetulus_griseus_chok1gshd
ENSHCOG00000017047	sept6	99	89.786	ENSCGRG00000007825	Sept6	100	90.692	Cricetulus_griseus_crigri
ENSHCOG00000017047	sept6	100	97.658	ENSCSEG00000002026	sept6	94	97.658	Cynoglossus_semilaevis
ENSHCOG00000017047	sept6	100	98.126	ENSCVAG00000004959	sept6	100	98.126	Cyprinodon_variegatus
ENSHCOG00000017047	sept6	100	96.487	ENSDARG00000010721	sept6	99	96.487	Danio_rerio
ENSHCOG00000017047	sept6	100	96.956	ENSELUG00000020499	sept6	96	96.956	Esox_lucius
ENSHCOG00000017047	sept6	100	90.398	ENSFCAG00000008744	SEPT6	100	90.398	Felis_catus
ENSHCOG00000017047	sept6	100	90.210	ENSFDAG00000002473	SEPT6	100	90.210	Fukomys_damarensis
ENSHCOG00000017047	sept6	100	98.126	ENSFHEG00000017987	sept6	100	98.126	Fundulus_heteroclitus
ENSHCOG00000017047	sept6	100	96.956	ENSGMOG00000001671	sept6	99	96.056	Gadus_morhua
ENSHCOG00000017047	sept6	100	98.361	ENSGAFG00000000922	sept6	100	98.361	Gambusia_affinis
ENSHCOG00000017047	sept6	100	98.829	ENSGACG00000017441	sept6	100	98.376	Gasterosteus_aculeatus
ENSHCOG00000017047	sept6	100	90.443	ENSGGOG00000009733	SEPT6	100	90.476	Gorilla_gorilla
ENSHCOG00000017047	sept6	100	98.126	ENSHBUG00000017506	sept6	100	98.126	Haplochromis_burtoni
ENSHCOG00000017047	sept6	100	96.037	ENSIPUG00000019317	sept6	85	96.037	Ictalurus_punctatus
ENSHCOG00000017047	sept6	100	90.443	ENSJJAG00000020412	Sept6	100	90.443	Jaculus_jaculus
ENSHCOG00000017047	sept6	100	97.436	ENSKMAG00000020207	sept6	100	97.436	Kryptolebias_marmoratus
ENSHCOG00000017047	sept6	100	98.834	ENSLBEG00000028683	sept6	95	98.834	Labrus_bergylta
ENSHCOG00000017047	sept6	100	93.911	ENSLOCG00000015233	sept6	99	94.500	Lepisosteus_oculatus
ENSHCOG00000017047	sept6	100	90.443	ENSMFAG00000003084	SEPT6	100	90.476	Macaca_fascicularis
ENSHCOG00000017047	sept6	100	90.443	ENSMMUG00000017669	SEPT6	100	90.443	Macaca_mulatta
ENSHCOG00000017047	sept6	100	90.443	ENSMNEG00000026932	SEPT6	100	90.443	Macaca_nemestrina
ENSHCOG00000017047	sept6	100	90.443	ENSMLEG00000030428	SEPT6	100	90.476	Mandrillus_leucophaeus
ENSHCOG00000017047	sept6	100	98.126	ENSMAMG00000019988	sept6	100	98.126	Mastacembelus_armatus
ENSHCOG00000017047	sept6	100	98.126	ENSMZEG00005007935	sept6	89	98.126	Maylandia_zebra
ENSHCOG00000017047	sept6	100	90.676	ENSMAUG00000018038	Sept6	100	90.676	Mesocricetus_auratus
ENSHCOG00000017047	sept6	98	90.974	ENSMOCG00000000500	Sept6	99	91.127	Microtus_ochrogaster
ENSHCOG00000017047	sept6	97	98.068	ENSMMOG00000004176	sept6	97	98.068	Mola_mola
ENSHCOG00000017047	sept6	100	97.658	ENSMALG00000007921	sept6	100	97.658	Monopterus_albus
ENSHCOG00000017047	sept6	100	89.510	MGP_CAROLIEiJ_G0032996	Sept6	100	89.510	Mus_caroli
ENSHCOG00000017047	sept6	100	89.277	ENSMUSG00000050379	Sept6	100	89.277	Mus_musculus
ENSHCOG00000017047	sept6	62	88.593	MGP_PahariEiJ_G0031540	-	71	88.593	Mus_pahari
ENSHCOG00000017047	sept6	100	89.510	MGP_SPRETEiJ_G0034149	Sept6	100	89.510	Mus_spretus
ENSHCOG00000017047	sept6	97	89.209	ENSMLUG00000005623	SEPT6	95	89.209	Myotis_lucifugus
ENSHCOG00000017047	sept6	100	89.744	ENSNGAG00000010702	Sept6	100	89.744	Nannospalax_galili
ENSHCOG00000017047	sept6	99	90.632	ENSNBRG00000011675	sept6	100	90.632	Neolamprologus_brichardi
ENSHCOG00000017047	sept6	100	90.443	ENSNLEG00000014873	SEPT6	100	90.692	Nomascus_leucogenys
ENSHCOG00000017047	sept6	100	98.126	ENSONIG00000002528	sept6	99	98.126	Oreochromis_niloticus
ENSHCOG00000017047	sept6	100	97.892	ENSORLG00000000997	sept6	100	98.000	Oryzias_latipes
ENSHCOG00000017047	sept6	100	97.892	ENSORLG00020003886	sept6	100	97.892	Oryzias_latipes_hni
ENSHCOG00000017047	sept6	100	97.892	ENSORLG00015013025	sept6	100	97.892	Oryzias_latipes_hsok
ENSHCOG00000017047	sept6	100	96.487	ENSOMEG00000014650	sept6	100	96.487	Oryzias_melastigma
ENSHCOG00000017047	sept6	100	90.443	ENSPPAG00000040865	SEPT6	100	90.476	Pan_paniscus
ENSHCOG00000017047	sept6	100	90.398	ENSPPRG00000023588	SEPT6	100	90.398	Panthera_pardus
ENSHCOG00000017047	sept6	96	77.805	ENSPTIG00000015338	SEPT6	99	77.859	Panthera_tigris_altaica
ENSHCOG00000017047	sept6	100	90.210	ENSPTRG00000022227	SEPT6	100	90.238	Pan_troglodytes
ENSHCOG00000017047	sept6	100	90.443	ENSPANG00000000899	SEPT6	100	90.443	Papio_anubis
ENSHCOG00000017047	sept6	100	89.044	ENSPKIG00000019114	sept6	100	89.044	Paramormyrops_kingsleyae
ENSHCOG00000017047	sept6	99	94.848	ENSPKIG00000013948	SEPT6	100	95.500	Paramormyrops_kingsleyae
ENSHCOG00000017047	sept6	99	96.009	ENSPMGG00000012133	sept6	100	96.009	Periophthalmus_magnuspinnatus
ENSHCOG00000017047	sept6	100	90.443	ENSPEMG00000016450	Sept6	100	90.443	Peromyscus_maniculatus_bairdii
ENSHCOG00000017047	sept6	100	86.014	ENSPCIG00000028910	SEPT6	100	86.014	Phascolarctos_cinereus
ENSHCOG00000017047	sept6	98	98.337	ENSPFOG00000024721	sept6	97	98.337	Poecilia_formosa
ENSHCOG00000017047	sept6	52	97.758	ENSPLAG00000005147	sept6	93	97.758	Poecilia_latipinna
ENSHCOG00000017047	sept6	100	98.595	ENSPLAG00000019878	sept6	100	98.595	Poecilia_latipinna
ENSHCOG00000017047	sept6	100	98.595	ENSPMEG00000023470	sept6	100	98.595	Poecilia_mexicana
ENSHCOG00000017047	sept6	100	98.126	ENSPREG00000012310	sept6	100	98.126	Poecilia_reticulata
ENSHCOG00000017047	sept6	100	88.759	ENSPPYG00000020673	SEPT6	100	88.759	Pongo_abelii
ENSHCOG00000017047	sept6	100	98.135	ENSPNYG00000009709	sept6	100	98.250	Pundamilia_nyererei
ENSHCOG00000017047	sept6	100	95.804	ENSPNAG00000021638	sept6	100	95.804	Pygocentrus_nattereri
ENSHCOG00000017047	sept6	100	90.443	ENSRBIG00000044672	SEPT6	100	90.443	Rhinopithecus_bieti
ENSHCOG00000017047	sept6	100	90.443	ENSRROG00000038667	SEPT6	100	90.476	Rhinopithecus_roxellana
ENSHCOG00000017047	sept6	100	89.977	ENSSBOG00000024143	SEPT6	100	89.977	Saimiri_boliviensis_boliviensis
ENSHCOG00000017047	sept6	99	86.620	ENSSHAG00000007460	SEPT6	98	86.620	Sarcophilus_harrisii
ENSHCOG00000017047	sept6	100	92.506	ENSSFOG00015005477	sept6	100	92.506	Scleropages_formosus
ENSHCOG00000017047	sept6	100	94.172	ENSSFOG00015010832	SEPT6	100	94.172	Scleropages_formosus
ENSHCOG00000017047	sept6	100	98.595	ENSSMAG00000012785	sept6	100	98.595	Scophthalmus_maximus
ENSHCOG00000017047	sept6	100	99.063	ENSSDUG00000005575	sept6	100	99.063	Seriola_dumerili
ENSHCOG00000017047	sept6	100	99.068	ENSSLDG00000003277	sept6	100	99.068	Seriola_lalandi_dorsalis
ENSHCOG00000017047	sept6	100	99.063	ENSSPAG00000010108	sept6	100	99.063	Stegastes_partitus
ENSHCOG00000017047	sept6	100	96.956	ENSTRUG00000010830	sept6	100	97.264	Takifugu_rubripes
ENSHCOG00000017047	sept6	100	96.253	ENSTNIG00000015761	sept6	100	95.592	Tetraodon_nigroviridis
ENSHCOG00000017047	sept6	56	94.167	ENSXCOG00000016712	sept6	89	94.167	Xiphophorus_couchianus
ENSHCOG00000017047	sept6	100	98.601	ENSXMAG00000013699	sept6	100	98.601	Xiphophorus_maculatus