EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000017228 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 635 bases
Position: chrKV880249.1:244060-244694
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000026360	RRM_1	PF00076.22	4.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000021463	-	327	-	ENSHCOP00000026360	108 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000017228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017228's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000017228	-	86	62.366	ENSHCOG00000016860	-	94	63.043

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017228	-	76	68.293	ENSG00000116754	SRSF11	63	67.901	Homo_sapiens
ENSHCOG00000017228	-	78	82.143	ENSG00000153914	SREK1	83	81.928	Homo_sapiens
ENSHCOG00000017228	-	76	68.293	ENSAPOG00000007244	-	58	69.136	Acanthochromis_polyacanthus
ENSHCOG00000017228	-	86	62.366	ENSAPOG00000004488	-	85	62.366	Acanthochromis_polyacanthus
ENSHCOG00000017228	-	78	65.476	ENSACIG00000012348	-	87	66.265	Amphilophus_citrinellus
ENSHCOG00000017228	-	81	90.805	ENSACIG00000015055	-	66	90.361	Amphilophus_citrinellus
ENSHCOG00000017228	-	86	62.366	ENSACIG00000018075	-	85	62.366	Amphilophus_citrinellus
ENSHCOG00000017228	-	81	93.103	ENSAOCG00000024368	-	84	92.771	Amphiprion_ocellaris
ENSHCOG00000017228	-	74	68.750	ENSAOCG00000000739	-	85	68.750	Amphiprion_ocellaris
ENSHCOG00000017228	-	86	62.366	ENSAPEG00000003619	SRSF11	85	62.366	Amphiprion_percula
ENSHCOG00000017228	-	76	69.512	ENSAPEG00000003142	SRSF11	84	69.136	Amphiprion_percula
ENSHCOG00000017228	-	81	90.805	ENSAPEG00000002218	-	90	90.361	Amphiprion_percula
ENSHCOG00000017228	-	86	62.366	ENSATEG00000007534	-	85	62.366	Anabas_testudineus
ENSHCOG00000017228	-	80	88.372	ENSATEG00000009464	-	95	88.372	Anabas_testudineus
ENSHCOG00000017228	-	82	66.292	ENSATEG00000011691	srsf11	75	69.136	Anabas_testudineus
ENSHCOG00000017228	-	78	82.143	ENSANAG00000031358	SREK1	83	81.928	Aotus_nancymaae
ENSHCOG00000017228	-	76	67.073	ENSACLG00000000623	srsf11	83	67.901	Astatotilapia_calliptera
ENSHCOG00000017228	-	81	80.682	ENSBTAG00000007321	SREK1	83	83.133	Bos_taurus
ENSHCOG00000017228	-	87	74.747	ENSCJAG00000015950	SREK1	83	81.928	Callithrix_jacchus
ENSHCOG00000017228	-	75	85.185	ENSCAFG00020019449	-	83	83.133	Canis_lupus_dingo
ENSHCOG00000017228	-	78	66.667	ENSCAFG00020017255	-	72	67.901	Canis_lupus_dingo
ENSHCOG00000017228	-	78	66.667	ENSCHIG00000025295	SRSF11	69	67.901	Capra_hircus
ENSHCOG00000017228	-	77	83.133	ENSCHIG00000025052	-	83	83.133	Capra_hircus
ENSHCOG00000017228	-	76	65.854	ENSTSYG00000033270	-	58	65.854	Carlito_syrichta
ENSHCOG00000017228	-	78	83.333	ENSTSYG00000036957	SREK1	83	83.133	Carlito_syrichta
ENSHCOG00000017228	-	78	82.143	ENSCCAG00000020591	SREK1	83	81.928	Cebus_capucinus
ENSHCOG00000017228	-	76	84.146	ENSCATG00000031482	SREK1	83	81.928	Cercocebus_atys
ENSHCOG00000017228	-	85	60.870	ENSCPBG00000022430	-	72	64.198	Chrysemys_picta_bellii
ENSHCOG00000017228	-	86	77.419	ENSCPBG00000026866	SREK1	62	85.185	Chrysemys_picta_bellii
ENSHCOG00000017228	-	76	84.146	ENSCANG00000030421	SREK1	83	81.928	Colobus_angolensis_palliatus
ENSHCOG00000017228	-	81	91.954	ENSCSEG00000013934	-	90	89.873	Cynoglossus_semilaevis
ENSHCOG00000017228	-	79	94.118	ENSCVAG00000002404	-	66	93.827	Cyprinodon_variegatus
ENSHCOG00000017228	-	83	62.222	ENSDARG00000098574	srsf11	91	63.855	Danio_rerio
ENSHCOG00000017228	-	75	85.185	ENSDORG00000023160	-	61	85.185	Dipodomys_ordii
ENSHCOG00000017228	-	83	80.220	ENSEASG00005006832	-	80	80.220	Equus_asinus_asinus
ENSHCOG00000017228	-	78	66.667	ENSEASG00005007847	SRSF11	71	67.901	Equus_asinus_asinus
ENSHCOG00000017228	-	80	81.395	ENSECAG00000035731	-	75	81.395	Equus_caballus
ENSHCOG00000017228	-	77	83.133	ENSFCAG00000036884	-	83	83.133	Felis_catus
ENSHCOG00000017228	-	89	60.606	ENSFCAG00000034448	-	75	61.856	Felis_catus
ENSHCOG00000017228	-	80	84.884	ENSFHEG00000020959	-	63	87.654	Fundulus_heteroclitus
ENSHCOG00000017228	-	85	79.787	ENSGALG00000043541	SREK1	84	84.337	Gallus_gallus
ENSHCOG00000017228	-	80	91.860	ENSGAFG00000001732	-	66	92.593	Gambusia_affinis
ENSHCOG00000017228	-	81	80.682	ENSGAGG00000006087	SREK1	62	85.185	Gopherus_agassizii
ENSHCOG00000017228	-	76	69.512	ENSGAGG00000022411	-	79	69.136	Gopherus_agassizii
ENSHCOG00000017228	-	76	84.146	ENSGGOG00000004737	SREK1	83	81.928	Gorilla_gorilla
ENSHCOG00000017228	-	83	85.263	ENSHBUG00000007082	-	60	88.889	Haplochromis_burtoni
ENSHCOG00000017228	-	78	83.333	ENSSTOG00000008850	SREK1	83	83.133	Ictidomys_tridecemlineatus
ENSHCOG00000017228	-	75	83.951	ENSJJAG00000008846	-	63	83.951	Jaculus_jaculus
ENSHCOG00000017228	-	76	69.512	ENSLBEG00000024167	srsf11	83	69.136	Labrus_bergylta
ENSHCOG00000017228	-	81	90.805	ENSLBEG00000022954	-	60	90.361	Labrus_bergylta
ENSHCOG00000017228	-	76	84.146	ENSMFAG00000039823	SREK1	83	81.928	Macaca_fascicularis
ENSHCOG00000017228	-	76	84.146	ENSMMUG00000014586	SREK1	75	84.146	Macaca_mulatta
ENSHCOG00000017228	-	76	84.146	ENSMNEG00000030723	SREK1	83	81.928	Macaca_nemestrina
ENSHCOG00000017228	-	78	82.143	ENSMLEG00000039078	SREK1	83	81.928	Mandrillus_leucophaeus
ENSHCOG00000017228	-	91	84.000	ENSMAMG00000003099	-	90	86.022	Mastacembelus_armatus
ENSHCOG00000017228	-	86	62.366	ENSMAMG00000015002	-	86	62.366	Mastacembelus_armatus
ENSHCOG00000017228	-	83	81.319	ENSMZEG00005005707	-	59	89.474	Maylandia_zebra
ENSHCOG00000017228	-	78	83.333	ENSMICG00000034959	SREK1	83	83.133	Microcebus_murinus
ENSHCOG00000017228	-	79	65.882	ENSMMOG00000008877	-	83	66.667	Mola_mola
ENSHCOG00000017228	-	86	62.366	ENSMMOG00000016751	-	85	62.366	Mola_mola
ENSHCOG00000017228	-	85	85.870	ENSMALG00000017086	srek1	93	87.952	Monopterus_albus
ENSHCOG00000017228	-	76	68.293	ENSMALG00000016608	srsf11	83	69.136	Monopterus_albus
ENSHCOG00000017228	-	78	66.667	MGP_CAROLIEiJ_G0025767	Srsf11	81	67.901	Mus_caroli
ENSHCOG00000017228	-	78	66.667	ENSMUSG00000055436	Srsf11	80	67.901	Mus_musculus
ENSHCOG00000017228	-	78	66.667	MGP_PahariEiJ_G0027217	Srsf11	81	67.901	Mus_pahari
ENSHCOG00000017228	-	78	66.667	MGP_SPRETEiJ_G0026719	Srsf11	81	67.901	Mus_spretus
ENSHCOG00000017228	-	75	85.185	ENSNGAG00000014631	-	61	85.185	Nannospalax_galili
ENSHCOG00000017228	-	83	85.263	ENSNBRG00000010656	-	60	88.889	Neolamprologus_brichardi
ENSHCOG00000017228	-	78	65.476	ENSNBRG00000020213	-	87	66.265	Neolamprologus_brichardi
ENSHCOG00000017228	-	76	84.146	ENSNLEG00000003827	SREK1	83	81.928	Nomascus_leucogenys
ENSHCOG00000017228	-	75	86.420	ENSODEG00000016218	-	79	86.420	Octodon_degus
ENSHCOG00000017228	-	75	67.901	ENSORLG00000030366	-	72	67.901	Oryzias_latipes
ENSHCOG00000017228	-	72	92.308	ENSORLG00000002711	-	65	92.308	Oryzias_latipes
ENSHCOG00000017228	-	77	92.771	ENSORLG00020012815	-	62	92.771	Oryzias_latipes_hni
ENSHCOG00000017228	-	76	68.293	ENSORLG00020009393	-	72	67.901	Oryzias_latipes_hni
ENSHCOG00000017228	-	82	92.135	ENSORLG00015020455	-	64	92.593	Oryzias_latipes_hsok
ENSHCOG00000017228	-	76	68.293	ENSORLG00015009374	-	72	67.901	Oryzias_latipes_hsok
ENSHCOG00000017228	-	76	84.146	ENSPPAG00000031605	SREK1	75	84.146	Pan_paniscus
ENSHCOG00000017228	-	78	83.333	ENSPPRG00000024617	SREK1	83	83.133	Panthera_pardus
ENSHCOG00000017228	-	78	83.333	ENSPTIG00000006608	SREK1	83	83.133	Panthera_tigris_altaica
ENSHCOG00000017228	-	76	84.146	ENSPTRG00000016936	SREK1	83	81.928	Pan_troglodytes
ENSHCOG00000017228	-	76	84.146	ENSPANG00000008953	SREK1	83	81.928	Papio_anubis
ENSHCOG00000017228	-	78	65.476	ENSPKIG00000021576	-	87	66.265	Paramormyrops_kingsleyae
ENSHCOG00000017228	-	83	84.444	ENSPMGG00000017029	-	75	84.884	Periophthalmus_magnuspinnatus
ENSHCOG00000017228	-	77	66.265	ENSPMGG00000000954	-	77	67.073	Periophthalmus_magnuspinnatus
ENSHCOG00000017228	-	86	61.290	ENSPMGG00000005045	-	81	61.957	Periophthalmus_magnuspinnatus
ENSHCOG00000017228	-	79	90.588	ENSPLAG00000014609	-	60	92.593	Poecilia_latipinna
ENSHCOG00000017228	-	79	90.588	ENSPLAG00000008818	-	60	92.593	Poecilia_latipinna
ENSHCOG00000017228	-	86	62.366	ENSPLAG00000009484	-	63	62.366	Poecilia_latipinna
ENSHCOG00000017228	-	79	90.588	ENSPMEG00000006607	-	60	92.593	Poecilia_mexicana
ENSHCOG00000017228	-	79	64.706	ENSPMEG00000018837	srsf11	74	62.222	Poecilia_mexicana
ENSHCOG00000017228	-	79	90.588	ENSPMEG00000006824	-	60	92.593	Poecilia_mexicana
ENSHCOG00000017228	-	86	62.366	ENSPMEG00000023453	-	63	62.366	Poecilia_mexicana
ENSHCOG00000017228	-	79	92.941	ENSPREG00000019922	-	65	92.593	Poecilia_reticulata
ENSHCOG00000017228	-	76	85.366	ENSPCOG00000026230	SREK1	83	83.133	Propithecus_coquereli
ENSHCOG00000017228	-	83	85.263	ENSPNYG00000007178	-	60	88.889	Pundamilia_nyererei
ENSHCOG00000017228	-	89	60.606	ENSRBIG00000042971	SRSF11	75	61.856	Rhinopithecus_bieti
ENSHCOG00000017228	-	76	84.146	ENSRBIG00000033818	SREK1	83	81.928	Rhinopithecus_bieti
ENSHCOG00000017228	-	76	84.146	ENSRROG00000017210	SREK1	83	81.928	Rhinopithecus_roxellana
ENSHCOG00000017228	-	89	60.606	ENSSBOG00000033461	SRSF11	75	61.856	Saimiri_boliviensis_boliviensis
ENSHCOG00000017228	-	76	84.146	ENSSBOG00000031230	SREK1	83	81.928	Saimiri_boliviensis_boliviensis
ENSHCOG00000017228	-	74	67.500	ENSSFOG00015016086	-	73	67.500	Scleropages_formosus
ENSHCOG00000017228	-	81	91.954	ENSSDUG00000010395	-	82	91.566	Seriola_dumerili
ENSHCOG00000017228	-	76	68.293	ENSSLDG00000015477	-	83	69.136	Seriola_lalandi_dorsalis
ENSHCOG00000017228	-	81	91.954	ENSSLDG00000016285	-	82	91.566	Seriola_lalandi_dorsalis
ENSHCOG00000017228	-	86	62.366	ENSSLDG00000012105	-	85	62.366	Seriola_lalandi_dorsalis
ENSHCOG00000017228	-	76	68.293	ENSSPAG00000016483	-	66	68.293	Stegastes_partitus
ENSHCOG00000017228	-	83	91.111	ENSSPAG00000022310	-	84	92.771	Stegastes_partitus
ENSHCOG00000017228	-	81	88.506	ENSTRUG00000022058	-	67	87.952	Takifugu_rubripes
ENSHCOG00000017228	-	89	60.606	ENSUAMG00000008403	-	75	61.856	Ursus_americanus
ENSHCOG00000017228	-	78	83.333	ENSUAMG00000022662	-	77	83.333	Ursus_americanus
ENSHCOG00000017228	-	75	85.185	ENSVVUG00000005888	-	83	83.133	Vulpes_vulpes
ENSHCOG00000017228	-	88	60.000	ENSXCOG00000003220	-	78	61.538	Xiphophorus_couchianus
ENSHCOG00000017228	-	80	91.860	ENSXCOG00000017792	-	63	92.593	Xiphophorus_couchianus
ENSHCOG00000017228	-	76	68.293	ENSXCOG00000015127	-	88	68.293	Xiphophorus_couchianus
ENSHCOG00000017228	-	86	62.366	ENSXMAG00000019180	SRSF11	61	62.366	Xiphophorus_maculatus
ENSHCOG00000017228	-	80	91.860	ENSXMAG00000028210	-	66	92.593	Xiphophorus_maculatus