EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000017240 (Gene tree)
Gene ID: -
Gene Symbol: SREK1
Alias: DKFZp564B176|SFRS12|SRrp508|SRrp86
Full Name: splicing regulatory glutamic acid and lysine rich protein 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 2079 bases
Position: chrKV880249.1:238883-240961
Accession: 17882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000013981	RRM_1	PF00076.22	3.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000021467	SREK1-201	990	-	ENSHCOP00000013981	329 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000017240's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017240's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017240	SREK1	52	76.836	ENSG00000153914	SREK1	100	64.474	Homo_sapiens
ENSHCOG00000017240	SREK1	53	85.549	ENSAPOG00000023618	srek1	52	76.733	Acanthochromis_polyacanthus
ENSHCOG00000017240	SREK1	53	80.328	ENSACIG00000015041	srek1	97	80.328	Amphilophus_citrinellus
ENSHCOG00000017240	SREK1	53	85.549	ENSAOCG00000024379	srek1	52	76.733	Amphiprion_ocellaris
ENSHCOG00000017240	SREK1	68	64.659	ENSATEG00000009450	srek1	61	65.975	Anabas_testudineus
ENSHCOG00000017240	SREK1	66	68.018	ENSANAG00000031358	SREK1	91	76.966	Aotus_nancymaae
ENSHCOG00000017240	SREK1	53	81.356	ENSACLG00000026754	srek1	61	81.356	Astatotilapia_calliptera
ENSHCOG00000017240	SREK1	66	68.304	ENSCJAG00000015950	SREK1	91	76.966	Callithrix_jacchus
ENSHCOG00000017240	SREK1	51	72.881	ENSCAFG00020019448	-	89	72.881	Canis_lupus_dingo
ENSHCOG00000017240	SREK1	52	76.271	ENSTSYG00000036957	SREK1	91	75.138	Carlito_syrichta
ENSHCOG00000017240	SREK1	52	76.966	ENSCATG00000031482	SREK1	91	76.966	Cercocebus_atys
ENSHCOG00000017240	SREK1	52	76.966	ENSCANG00000030421	SREK1	91	76.966	Colobus_angolensis_palliatus
ENSHCOG00000017240	SREK1	53	83.333	ENSCVAG00000002411	srek1	99	74.000	Cyprinodon_variegatus
ENSHCOG00000017240	SREK1	52	76.966	ENSDORG00000023425	-	91	76.966	Dipodomys_ordii
ENSHCOG00000017240	SREK1	52	75.691	ENSEASG00005006829	-	91	75.691	Equus_asinus_asinus
ENSHCOG00000017240	SREK1	52	75.691	ENSECAG00000036994	-	91	75.691	Equus_caballus
ENSHCOG00000017240	SREK1	61	62.449	ENSFHEG00000020971	srek1	63	68.807	Fundulus_heteroclitus
ENSHCOG00000017240	SREK1	52	76.966	ENSGGOG00000004737	SREK1	91	76.966	Gorilla_gorilla
ENSHCOG00000017240	SREK1	53	81.356	ENSHBUG00000007057	srek1	96	81.356	Haplochromis_burtoni
ENSHCOG00000017240	SREK1	52	76.966	ENSJJAG00000000214	-	91	76.966	Jaculus_jaculus
ENSHCOG00000017240	SREK1	57	78.610	ENSLBEG00000022980	srek1	96	78.610	Labrus_bergylta
ENSHCOG00000017240	SREK1	52	76.966	ENSMFAG00000039823	SREK1	91	76.966	Macaca_fascicularis
ENSHCOG00000017240	SREK1	52	76.966	ENSMNEG00000030723	SREK1	91	76.966	Macaca_nemestrina
ENSHCOG00000017240	SREK1	52	76.966	ENSMLEG00000039078	SREK1	91	76.966	Mandrillus_leucophaeus
ENSHCOG00000017240	SREK1	53	81.356	ENSMZEG00005005719	srek1	96	81.356	Maylandia_zebra
ENSHCOG00000017240	SREK1	52	73.889	ENSMAUG00000010066	-	66	66.509	Mesocricetus_auratus
ENSHCOG00000017240	SREK1	52	76.966	ENSMICG00000034959	SREK1	91	76.966	Microcebus_murinus
ENSHCOG00000017240	SREK1	52	73.889	ENSMOCG00000001536	-	65	66.509	Microtus_ochrogaster
ENSHCOG00000017240	SREK1	54	80.791	ENSMMOG00000008409	srek1	93	80.791	Mola_mola
ENSHCOG00000017240	SREK1	53	84.393	ENSMALG00000017086	srek1	50	68.240	Monopterus_albus
ENSHCOG00000017240	SREK1	52	74.033	ENSNGAG00000017527	-	91	74.586	Nannospalax_galili
ENSHCOG00000017240	SREK1	53	80.447	ENSNBRG00000010718	srek1	96	80.447	Neolamprologus_brichardi
ENSHCOG00000017240	SREK1	53	84.971	ENSONIG00000011080	srek1	60	73.585	Oreochromis_niloticus
ENSHCOG00000017240	SREK1	53	80.220	ENSORLG00015020471	srek1	94	80.220	Oryzias_latipes_hsok
ENSHCOG00000017240	SREK1	53	84.393	ENSOMEG00000015817	srek1	54	69.697	Oryzias_melastigma
ENSHCOG00000017240	SREK1	52	76.966	ENSPPAG00000031605	SREK1	91	76.966	Pan_paniscus
ENSHCOG00000017240	SREK1	52	76.966	ENSPTRG00000016936	SREK1	91	76.966	Pan_troglodytes
ENSHCOG00000017240	SREK1	52	76.966	ENSPANG00000008953	SREK1	91	76.966	Papio_anubis
ENSHCOG00000017240	SREK1	53	80.460	ENSPMGG00000017031	srek1	98	80.460	Periophthalmus_magnuspinnatus
ENSHCOG00000017240	SREK1	52	73.889	ENSPEMG00000024051	-	67	66.509	Peromyscus_maniculatus_bairdii
ENSHCOG00000017240	SREK1	52	77.528	ENSPCIG00000017750	-	91	77.528	Phascolarctos_cinereus
ENSHCOG00000017240	SREK1	53	87.356	ENSPLAG00000008827	srek1	99	87.356	Poecilia_latipinna
ENSHCOG00000017240	SREK1	51	86.905	ENSPREG00000019912	srek1	98	86.905	Poecilia_reticulata
ENSHCOG00000017240	SREK1	52	76.966	ENSPCOG00000026230	SREK1	91	76.966	Propithecus_coquereli
ENSHCOG00000017240	SREK1	53	77.778	ENSPNAG00000004328	srek1	50	62.857	Pygocentrus_nattereri
ENSHCOG00000017240	SREK1	52	76.836	ENSRBIG00000033818	SREK1	92	74.863	Rhinopithecus_bieti
ENSHCOG00000017240	SREK1	52	76.966	ENSRROG00000017210	SREK1	91	76.966	Rhinopithecus_roxellana
ENSHCOG00000017240	SREK1	52	76.966	ENSSBOG00000031230	SREK1	91	76.966	Saimiri_boliviensis_boliviensis
ENSHCOG00000017240	SREK1	52	76.966	ENSSPUG00000016553	SREK1	57	76.966	Sphenodon_punctatus
ENSHCOG00000017240	SREK1	53	84.659	ENSSPAG00000022298	srek1	99	84.659	Stegastes_partitus
ENSHCOG00000017240	SREK1	55	79.444	ENSTRUG00000002960	srek1	99	79.444	Takifugu_rubripes
ENSHCOG00000017240	SREK1	53	83.429	ENSTNIG00000013463	srek1	53	73.810	Tetraodon_nigroviridis
ENSHCOG00000017240	SREK1	52	76.966	ENSUAMG00000022661	-	91	76.966	Ursus_americanus
ENSHCOG00000017240	SREK1	53	69.000	ENSXETG00000021460	srek1	53	58.712	Xenopus_tropicalis
ENSHCOG00000017240	SREK1	53	83.616	ENSXCOG00000017793	srek1	97	83.616	Xiphophorus_couchianus