EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000017241 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 178978 bases
Position: chrKV880055.1:14591-193568
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000013968	RRM_1	PF00076.22	1.2e-27	1	2
ENSHCOP00000013968	RRM_1	PF00076.22	1.2e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000021444	-	1206	-	ENSHCOP00000013968	401 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000017241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017241's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000017241	-	73	68.605	ENSHCOG00000012067	-	95	68.148
ENSHCOG00000017241	-	98	71.571	ENSHCOG00000000266	msi2a	94	79.577
ENSHCOG00000017241	-	66	74.208	ENSHCOG00000012019	MSI1	93	74.009
ENSHCOG00000017241	-	58	37.000	ENSHCOG00000008541	dazap1	61	38.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017241	-	71	87.678	ENSG00000153944	MSI2	93	87.857	Homo_sapiens
ENSHCOG00000017241	-	98	71.571	ENSAPOG00000001658	msi2a	95	82.422	Acanthochromis_polyacanthus
ENSHCOG00000017241	-	71	87.678	ENSAMEG00000002697	MSI2	74	86.522	Ailuropoda_melanoleuca
ENSHCOG00000017241	-	98	69.521	ENSACIG00000009475	msi2a	96	70.352	Amphilophus_citrinellus
ENSHCOG00000017241	-	75	82.031	ENSAPEG00000007706	msi2a	95	82.422	Amphiprion_percula
ENSHCOG00000017241	-	98	71.571	ENSATEG00000010498	msi2a	95	82.422	Anabas_testudineus
ENSHCOG00000017241	-	69	89.252	ENSATEG00000003301	-	94	89.720	Anabas_testudineus
ENSHCOG00000017241	-	91	65.556	ENSACAG00000005452	MSI2	85	66.938	Anolis_carolinensis
ENSHCOG00000017241	-	71	81.967	ENSANAG00000037827	MSI2	91	86.730	Aotus_nancymaae
ENSHCOG00000017241	-	98	71.571	ENSACLG00000007752	msi2a	95	82.031	Astatotilapia_calliptera
ENSHCOG00000017241	-	98	70.896	ENSAMXG00000010474	msi2b	91	89.048	Astyanax_mexicanus
ENSHCOG00000017241	-	98	71.642	ENSAMXG00000032796	msi2a	95	82.642	Astyanax_mexicanus
ENSHCOG00000017241	-	66	87.619	ENSBTAG00000004406	MSI2	91	86.580	Bos_taurus
ENSHCOG00000017241	-	56	53.175	WBGene00003423	msi-1	79	53.175	Caenorhabditis_elegans
ENSHCOG00000017241	-	71	81.967	ENSCJAG00000013998	MSI2	91	86.730	Callithrix_jacchus
ENSHCOG00000017241	-	70	87.440	ENSCAFG00020025620	MSI2	72	85.116	Canis_lupus_dingo
ENSHCOG00000017241	-	71	80.738	ENSCHIG00000016580	MSI2	95	80.303	Capra_hircus
ENSHCOG00000017241	-	64	84.536	ENSCPOG00000034042	MSI2	93	83.645	Cavia_porcellus
ENSHCOG00000017241	-	71	81.967	ENSCCAG00000033927	MSI2	91	86.730	Cebus_capucinus
ENSHCOG00000017241	-	64	88.652	ENSCATG00000040879	MSI2	91	86.730	Cercocebus_atys
ENSHCOG00000017241	-	77	81.967	ENSCLAG00000014325	MSI2	76	81.369	Chinchilla_lanigera
ENSHCOG00000017241	-	71	81.967	ENSCSAG00000005633	MSI2	95	81.439	Chlorocebus_sabaeus
ENSHCOG00000017241	-	57	70.879	ENSCHOG00000008660	MSI2	82	70.879	Choloepus_hoffmanni
ENSHCOG00000017241	-	98	62.379	ENSCPBG00000009942	MSI2	91	83.085	Chrysemys_picta_bellii
ENSHCOG00000017241	-	71	87.678	ENSCANG00000036414	MSI2	91	86.730	Colobus_angolensis_palliatus
ENSHCOG00000017241	-	71	81.557	ENSCGRG00001013330	Msi2	95	81.061	Cricetulus_griseus_chok1gshd
ENSHCOG00000017241	-	71	87.678	ENSCGRG00000003141	Msi2	75	86.522	Cricetulus_griseus_crigri
ENSHCOG00000017241	-	67	74.783	ENSCSEG00000013557	msi2a	76	74.783	Cynoglossus_semilaevis
ENSHCOG00000017241	-	75	76.923	ENSCSEG00000003266	-	94	76.923	Cynoglossus_semilaevis
ENSHCOG00000017241	-	98	70.075	ENSCVAG00000017075	msi2a	98	82.422	Cyprinodon_variegatus
ENSHCOG00000017241	-	98	68.905	ENSDARG00000033901	msi2a	97	69.727	Danio_rerio
ENSHCOG00000017241	-	98	72.953	ENSDARG00000032614	msi2b	100	92.857	Danio_rerio
ENSHCOG00000017241	-	64	88.235	ENSDNOG00000014501	MSI2	94	87.054	Dasypus_novemcinctus
ENSHCOG00000017241	-	54	75.728	ENSDORG00000005394	Msi2	83	66.667	Dipodomys_ordii
ENSHCOG00000017241	-	65	54.167	FBgn0260943	Rbp6	88	63.889	Drosophila_melanogaster
ENSHCOG00000017241	-	52	68.421	ENSETEG00000012450	-	64	68.421	Echinops_telfairi
ENSHCOG00000017241	-	52	73.810	ENSEBUG00000006732	msi2a	58	73.810	Eptatretus_burgeri
ENSHCOG00000017241	-	64	86.730	ENSEASG00005002965	MSI2	93	63.032	Equus_asinus_asinus
ENSHCOG00000017241	-	77	81.967	ENSECAG00000011435	MSI2	81	85.542	Equus_caballus
ENSHCOG00000017241	-	60	73.077	ENSEEUG00000007810	MSI2	98	73.267	Erinaceus_europaeus
ENSHCOG00000017241	-	98	70.720	ENSELUG00000011747	msi2a	95	84.375	Esox_lucius
ENSHCOG00000017241	-	98	71.675	ENSELUG00000001361	msi2b	97	72.482	Esox_lucius
ENSHCOG00000017241	-	71	81.967	ENSFCAG00000041686	MSI2	91	86.730	Felis_catus
ENSHCOG00000017241	-	71	87.678	ENSFDAG00000016118	MSI2	74	86.522	Fukomys_damarensis
ENSHCOG00000017241	-	98	71.820	ENSFHEG00000000084	msi2a	95	82.422	Fundulus_heteroclitus
ENSHCOG00000017241	-	70	89.071	ENSGALG00000005567	MSI2	76	81.369	Gallus_gallus
ENSHCOG00000017241	-	75	73.946	ENSGAFG00000006974	msi2a	98	74.330	Gambusia_affinis
ENSHCOG00000017241	-	98	66.746	ENSGAGG00000016542	MSI2	97	67.773	Gopherus_agassizii
ENSHCOG00000017241	-	71	87.678	ENSGGOG00000013182	MSI2	91	86.730	Gorilla_gorilla
ENSHCOG00000017241	-	98	71.571	ENSHBUG00000020800	msi2a	95	82.031	Haplochromis_burtoni
ENSHCOG00000017241	-	77	70.492	ENSHGLG00000012444	MSI2	77	71.429	Heterocephalus_glaber_female
ENSHCOG00000017241	-	59	88.571	ENSHGLG00100003744	MSI2	60	86.290	Heterocephalus_glaber_male
ENSHCOG00000017241	-	98	71.891	ENSIPUG00000021097	msi2a	96	83.128	Ictalurus_punctatus
ENSHCOG00000017241	-	98	70.896	ENSIPUG00000003732	msi2b	94	79.297	Ictalurus_punctatus
ENSHCOG00000017241	-	64	84.536	ENSSTOG00000007884	MSI2	93	83.645	Ictidomys_tridecemlineatus
ENSHCOG00000017241	-	80	47.893	ENSJJAG00000006292	-	93	47.893	Jaculus_jaculus
ENSHCOG00000017241	-	98	70.324	ENSKMAG00000009494	msi2a	95	81.439	Kryptolebias_marmoratus
ENSHCOG00000017241	-	98	71.571	ENSLBEG00000007061	msi2a	95	82.422	Labrus_bergylta
ENSHCOG00000017241	-	91	66.761	ENSLBEG00000026223	-	96	67.705	Labrus_bergylta
ENSHCOG00000017241	-	98	71.891	ENSLOCG00000004675	msi2b	97	72.705	Lepisosteus_oculatus
ENSHCOG00000017241	-	71	87.678	ENSMFAG00000003775	MSI2	91	86.730	Macaca_fascicularis
ENSHCOG00000017241	-	71	87.678	ENSMMUG00000002069	MSI2	91	86.730	Macaca_mulatta
ENSHCOG00000017241	-	71	81.967	ENSMNEG00000045275	MSI2	91	86.730	Macaca_nemestrina
ENSHCOG00000017241	-	71	87.678	ENSMLEG00000033888	MSI2	91	86.730	Mandrillus_leucophaeus
ENSHCOG00000017241	-	98	71.144	ENSMAMG00000010503	msi2a	95	82.101	Mastacembelus_armatus
ENSHCOG00000017241	-	98	79.156	ENSMAMG00000002488	-	99	80.132	Mastacembelus_armatus
ENSHCOG00000017241	-	98	71.571	ENSMZEG00005007676	msi2a	95	82.031	Maylandia_zebra
ENSHCOG00000017241	-	77	81.557	ENSMAUG00000003862	Msi2	76	80.989	Mesocricetus_auratus
ENSHCOG00000017241	-	71	81.967	ENSMICG00000013598	-	91	86.730	Microcebus_murinus
ENSHCOG00000017241	-	71	62.857	ENSMICG00000032913	-	96	61.224	Microcebus_murinus
ENSHCOG00000017241	-	77	81.557	ENSMOCG00000005820	Msi2	76	80.989	Microtus_ochrogaster
ENSHCOG00000017241	-	80	77.455	ENSMMOG00000008348	msi2a	83	86.124	Mola_mola
ENSHCOG00000017241	-	59	89.524	ENSMODG00000014790	MSI2	60	87.097	Monodelphis_domestica
ENSHCOG00000017241	-	98	75.817	ENSMALG00000000071	msi2a	95	82.422	Monopterus_albus
ENSHCOG00000017241	-	77	81.557	MGP_CAROLIEiJ_G0016948	Msi2	100	86.275	Mus_caroli
ENSHCOG00000017241	-	77	81.557	ENSMUSG00000069769	Msi2	100	86.275	Mus_musculus
ENSHCOG00000017241	-	77	81.557	MGP_PahariEiJ_G0018079	Msi2	100	86.275	Mus_pahari
ENSHCOG00000017241	-	77	81.557	MGP_SPRETEiJ_G0017795	Msi2	100	86.275	Mus_spretus
ENSHCOG00000017241	-	64	87.678	ENSMPUG00000015377	MSI2	91	86.580	Mustela_putorius_furo
ENSHCOG00000017241	-	64	87.619	ENSMLUG00000007865	MSI2	91	86.522	Myotis_lucifugus
ENSHCOG00000017241	-	77	81.557	ENSNGAG00000017807	Msi2	76	80.989	Nannospalax_galili
ENSHCOG00000017241	-	98	70.075	ENSNBRG00000014596	msi2a	95	82.031	Neolamprologus_brichardi
ENSHCOG00000017241	-	70	87.560	ENSNLEG00000008059	MSI2	95	86.603	Nomascus_leucogenys
ENSHCOG00000017241	-	52	78.947	ENSOPRG00000000872	-	64	78.947	Ochotona_princeps
ENSHCOG00000017241	-	77	81.967	ENSODEG00000011974	MSI2	76	81.369	Octodon_degus
ENSHCOG00000017241	-	92	66.076	ENSOANG00000005667	MSI2	91	67.595	Ornithorhynchus_anatinus
ENSHCOG00000017241	-	64	87.678	ENSOCUG00000010440	MSI2	91	86.580	Oryctolagus_cuniculus
ENSHCOG00000017241	-	98	70.324	ENSORLG00000009671	msi2a	95	81.481	Oryzias_latipes
ENSHCOG00000017241	-	98	71.820	ENSORLG00020021556	msi2a	95	81.481	Oryzias_latipes_hni
ENSHCOG00000017241	-	98	70.324	ENSORLG00015004592	msi2a	95	81.481	Oryzias_latipes_hsok
ENSHCOG00000017241	-	98	70.324	ENSOMEG00000000146	msi2a	91	86.522	Oryzias_melastigma
ENSHCOG00000017241	-	64	81.991	ENSOGAG00000005621	MSI2	94	81.385	Otolemur_garnettii
ENSHCOG00000017241	-	71	87.678	ENSPPAG00000037697	MSI2	91	86.730	Pan_paniscus
ENSHCOG00000017241	-	64	87.678	ENSPPRG00000001848	MSI2	91	86.730	Panthera_pardus
ENSHCOG00000017241	-	58	70.213	ENSPTIG00000021873	-	91	70.213	Panthera_tigris_altaica
ENSHCOG00000017241	-	70	87.560	ENSPTIG00000021678	MSI2	83	86.603	Panthera_tigris_altaica
ENSHCOG00000017241	-	71	87.678	ENSPTRG00000009437	MSI2	91	86.730	Pan_troglodytes
ENSHCOG00000017241	-	71	81.967	ENSPANG00000022319	MSI2	91	86.730	Papio_anubis
ENSHCOG00000017241	-	98	64.677	ENSPKIG00000007038	-	90	81.070	Paramormyrops_kingsleyae
ENSHCOG00000017241	-	98	67.143	ENSPSIG00000008618	MSI2	97	67.933	Pelodiscus_sinensis
ENSHCOG00000017241	-	75	81.641	ENSPMGG00000005888	msi2a	95	82.031	Periophthalmus_magnuspinnatus
ENSHCOG00000017241	-	98	64.838	ENSPCIG00000006063	MSI2	77	79.336	Phascolarctos_cinereus
ENSHCOG00000017241	-	98	71.571	ENSPREG00000000881	msi2a	96	82.422	Poecilia_reticulata
ENSHCOG00000017241	-	65	84.416	ENSPPYG00000008244	-	93	83.333	Pongo_abelii
ENSHCOG00000017241	-	51	62.000	ENSPCAG00000010552	MSI2	93	64.583	Procavia_capensis
ENSHCOG00000017241	-	57	87.912	ENSPVAG00000017053	MSI2	94	76.856	Pteropus_vampyrus
ENSHCOG00000017241	-	98	71.571	ENSPNYG00000018393	msi2a	95	82.031	Pundamilia_nyererei
ENSHCOG00000017241	-	98	70.896	ENSPNAG00000000844	msi2b	95	83.658	Pygocentrus_nattereri
ENSHCOG00000017241	-	98	72.637	ENSPNAG00000014957	msi2a	95	84.436	Pygocentrus_nattereri
ENSHCOG00000017241	-	64	89.175	ENSRNOG00000025338	Msi2	94	87.850	Rattus_norvegicus
ENSHCOG00000017241	-	71	87.678	ENSSBOG00000026425	MSI2	91	86.730	Saimiri_boliviensis_boliviensis
ENSHCOG00000017241	-	71	88.626	ENSSHAG00000008672	MSI2	74	87.391	Sarcophilus_harrisii
ENSHCOG00000017241	-	57	86.522	ENSSFOG00015021687	-	78	86.522	Scleropages_formosus
ENSHCOG00000017241	-	90	61.658	ENSSFOG00015012168	msi2b	88	61.658	Scleropages_formosus
ENSHCOG00000017241	-	98	71.820	ENSSMAG00000018484	msi2a	95	82.422	Scophthalmus_maximus
ENSHCOG00000017241	-	98	71.571	ENSSDUG00000014507	msi2a	95	82.422	Seriola_dumerili
ENSHCOG00000017241	-	73	81.600	ENSSDUG00000021968	-	99	79.470	Seriola_dumerili
ENSHCOG00000017241	-	98	71.571	ENSSLDG00000017172	msi2a	95	82.422	Seriola_lalandi_dorsalis
ENSHCOG00000017241	-	98	71.571	ENSSPAG00000017793	msi2a	95	81.481	Stegastes_partitus
ENSHCOG00000017241	-	71	87.678	ENSSSCG00000038505	MSI2	96	81.893	Sus_scrofa
ENSHCOG00000017241	-	59	89.524	ENSTGUG00000008452	MSI2	60	87.097	Taeniopygia_guttata
ENSHCOG00000017241	-	98	71.571	ENSTRUG00000021248	msi2a	95	79.336	Takifugu_rubripes
ENSHCOG00000017241	-	58	70.293	ENSTBEG00000001241	MSI2	73	70.293	Tupaia_belangeri
ENSHCOG00000017241	-	64	89.474	ENSTTRG00000002189	MSI2	85	89.474	Tursiops_truncatus
ENSHCOG00000017241	-	66	87.619	ENSUAMG00000000700	MSI2	92	87.619	Ursus_americanus
ENSHCOG00000017241	-	66	89.119	ENSUMAG00000000505	MSI2	95	89.119	Ursus_maritimus
ENSHCOG00000017241	-	77	81.967	ENSVVUG00000011783	MSI2	76	81.369	Vulpes_vulpes
ENSHCOG00000017241	-	98	70.738	ENSXCOG00000006113	msi2a	96	71.574	Xiphophorus_couchianus
ENSHCOG00000017241	-	98	71.820	ENSXMAG00000000608	msi2a	98	82.422	Xiphophorus_maculatus