EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000017328 (Gene tree)
Gene ID: 109517459
Gene Symbol: -
Alias: -
Full Name: tudor domain containing 6
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 4203 bases
Position: chrKV880001.1:2494213-2498415
Accession: 109517459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000026412	TUDOR	PF00567.24	4.8e-125	1	6
ENSHCOP00000026412	TUDOR	PF00567.24	4.8e-125	2	6
ENSHCOP00000026412	TUDOR	PF00567.24	4.8e-125	3	6
ENSHCOP00000026412	TUDOR	PF00567.24	4.8e-125	4	6
ENSHCOP00000026412	TUDOR	PF00567.24	4.8e-125	5	6
ENSHCOP00000026412	TUDOR	PF00567.24	4.8e-125	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000021573	-	4203	XM_019872642	ENSHCOP00000026412	1400 (aa)	XP_019728201	UPI00094E12A5

Gene Model

Click here to download ENSHCOG00000017328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000017328	-	99	41.935	ENSHCOG00000019950	tdrd6	82	41.935
ENSHCOG00000017328	-	69	32.484	ENSHCOG00000002840	tdrd1	72	32.484

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017328	-	100	53.431	ENSAPOG00000020893	-	99	53.431	Acanthochromis_polyacanthus
ENSHCOG00000017328	-	99	37.436	ENSAPOG00000023805	tdrd6	87	37.436	Acanthochromis_polyacanthus
ENSHCOG00000017328	-	99	30.932	ENSAMEG00000001687	TDRD6	83	30.932	Ailuropoda_melanoleuca
ENSHCOG00000017328	-	99	47.989	ENSACIG00000009194	-	99	47.989	Amphilophus_citrinellus
ENSHCOG00000017328	-	99	37.436	ENSAOCG00000013365	tdrd6	73	37.436	Amphiprion_ocellaris
ENSHCOG00000017328	-	99	53.477	ENSAOCG00000017073	-	99	53.477	Amphiprion_ocellaris
ENSHCOG00000017328	-	99	53.333	ENSAPEG00000011090	-	98	53.333	Amphiprion_percula
ENSHCOG00000017328	-	99	37.949	ENSAPEG00000015328	tdrd6	86	37.949	Amphiprion_percula
ENSHCOG00000017328	-	99	61.202	ENSATEG00000001389	si:ch211-189e2.3	99	59.278	Anabas_testudineus
ENSHCOG00000017328	-	93	40.000	ENSATEG00000016586	tdrd6	74	40.000	Anabas_testudineus
ENSHCOG00000017328	-	96	37.931	ENSACLG00000007717	-	77	37.931	Astatotilapia_calliptera
ENSHCOG00000017328	-	100	52.174	ENSACLG00000003092	-	99	52.174	Astatotilapia_calliptera
ENSHCOG00000017328	-	95	40.094	ENSAMXG00000032110	si:ch211-189e2.3	99	31.967	Astyanax_mexicanus
ENSHCOG00000017328	-	99	32.033	ENSAMXG00000010029	tdrd6	72	32.033	Astyanax_mexicanus
ENSHCOG00000017328	-	99	33.690	ENSCJAG00000012035	TDRD6	83	33.690	Callithrix_jacchus
ENSHCOG00000017328	-	99	31.973	ENSCAFG00000002036	TDRD6	83	31.556	Canis_familiaris
ENSHCOG00000017328	-	99	32.715	ENSCAFG00020012649	TDRD6	83	31.556	Canis_lupus_dingo
ENSHCOG00000017328	-	99	30.043	ENSTSYG00000007971	TDRD6	83	30.043	Carlito_syrichta
ENSHCOG00000017328	-	99	34.946	ENSCATG00000023914	TDRD6	83	34.946	Cercocebus_atys
ENSHCOG00000017328	-	86	33.641	ENSCPBG00000021664	TDRD6	71	33.641	Chrysemys_picta_bellii
ENSHCOG00000017328	-	100	46.300	ENSCSEG00000003495	-	99	46.300	Cynoglossus_semilaevis
ENSHCOG00000017328	-	99	38.286	ENSCSEG00000019023	tdrd6	82	38.286	Cynoglossus_semilaevis
ENSHCOG00000017328	-	66	46.000	ENSCVAG00000001528	-	94	46.000	Cyprinodon_variegatus
ENSHCOG00000017328	-	100	42.857	ENSDARG00000089954	si:ch211-189e2.3	92	42.857	Danio_rerio
ENSHCOG00000017328	-	99	39.891	ENSDARG00000070052	tdrd6	76	39.891	Danio_rerio
ENSHCOG00000017328	-	99	36.813	ENSETEG00000015260	TDRD6	72	36.813	Echinops_telfairi
ENSHCOG00000017328	-	99	33.684	ENSELUG00000010350	tdrd6	74	33.567	Esox_lucius
ENSHCOG00000017328	-	99	47.090	ENSELUG00000018873	-	99	47.090	Esox_lucius
ENSHCOG00000017328	-	90	30.085	ENSFDAG00000005622	TDRD6	64	32.323	Fukomys_damarensis
ENSHCOG00000017328	-	99	39.286	ENSFHEG00000022915	tdrd6	75	39.286	Fundulus_heteroclitus
ENSHCOG00000017328	-	68	47.208	ENSGMOG00000012765	-	99	47.208	Gadus_morhua
ENSHCOG00000017328	-	92	38.462	ENSGMOG00000005132	tdrd6	99	39.451	Gadus_morhua
ENSHCOG00000017328	-	99	36.453	ENSGAFG00000009328	tdrd6	77	36.453	Gambusia_affinis
ENSHCOG00000017328	-	99	32.548	ENSGACG00000004820	tdrd6	99	32.548	Gasterosteus_aculeatus
ENSHCOG00000017328	-	99	36.649	ENSHBUG00000012579	tdrd6	79	36.649	Haplochromis_burtoni
ENSHCOG00000017328	-	100	50.827	ENSHBUG00000000351	-	99	50.827	Haplochromis_burtoni
ENSHCOG00000017328	-	95	40.488	ENSIPUG00000023805	tdrd6	77	40.488	Ictalurus_punctatus
ENSHCOG00000017328	-	75	32.457	ENSKMAG00000003969	-	91	32.684	Kryptolebias_marmoratus
ENSHCOG00000017328	-	99	46.569	ENSKMAG00000015790	-	99	46.569	Kryptolebias_marmoratus
ENSHCOG00000017328	-	100	52.577	ENSLBEG00000004565	-	99	52.577	Labrus_bergylta
ENSHCOG00000017328	-	99	40.984	ENSLBEG00000022955	tdrd6	84	40.984	Labrus_bergylta
ENSHCOG00000017328	-	99	31.212	ENSLACG00000010837	TDRD6	99	31.212	Latimeria_chalumnae
ENSHCOG00000017328	-	89	48.571	ENSLOCG00000016482	tdrd6	90	48.571	Lepisosteus_oculatus
ENSHCOG00000017328	-	99	30.702	ENSLAFG00000025617	TDRD6	75	30.702	Loxodonta_africana
ENSHCOG00000017328	-	99	59.669	ENSMAMG00000000227	-	99	59.669	Mastacembelus_armatus
ENSHCOG00000017328	-	99	35.270	ENSMAMG00000007725	tdrd6	82	35.270	Mastacembelus_armatus
ENSHCOG00000017328	-	100	50.591	ENSMZEG00005012754	-	99	50.591	Maylandia_zebra
ENSHCOG00000017328	-	99	36.649	ENSMZEG00005003573	tdrd6	78	36.649	Maylandia_zebra
ENSHCOG00000017328	-	84	31.556	ENSMICG00000030777	TDRD6	78	31.556	Microcebus_murinus
ENSHCOG00000017328	-	99	39.884	ENSMMOG00000015651	tdrd6	85	39.884	Mola_mola
ENSHCOG00000017328	-	99	42.391	ENSMALG00000019679	tdrd6	78	42.391	Monopterus_albus
ENSHCOG00000017328	-	99	56.500	ENSMALG00000019184	-	98	56.500	Monopterus_albus
ENSHCOG00000017328	-	99	31.624	ENSMUSG00000040140	Tdrd6	82	31.624	Mus_musculus
ENSHCOG00000017328	-	99	31.197	MGP_SPRETEiJ_G0022544	Tdrd6	82	31.197	Mus_spretus
ENSHCOG00000017328	-	99	30.952	ENSMPUG00000012444	TDRD6	84	30.315	Mustela_putorius_furo
ENSHCOG00000017328	-	94	36.975	ENSNBRG00000018258	tdrd6	89	36.975	Neolamprologus_brichardi
ENSHCOG00000017328	-	100	47.847	ENSNBRG00000007041	-	99	47.847	Neolamprologus_brichardi
ENSHCOG00000017328	-	99	32.044	ENSMEUG00000014304	TDRD6	76	32.044	Notamacropus_eugenii
ENSHCOG00000017328	-	99	34.938	ENSONIG00000001218	tdrd6	99	34.938	Oreochromis_niloticus
ENSHCOG00000017328	-	97	31.280	ENSORLG00000015951	amh	70	31.169	Oryzias_latipes
ENSHCOG00000017328	-	97	31.517	ENSORLG00020005897	amh	55	31.405	Oryzias_latipes_hni
ENSHCOG00000017328	-	97	31.161	ENSORLG00015001382	amh	69	31.051	Oryzias_latipes_hsok
ENSHCOG00000017328	-	97	30.132	ENSOMEG00000014481	tdrd6	79	30.132	Oryzias_melastigma
ENSHCOG00000017328	-	93	33.023	ENSOGAG00000000404	TDRD6	80	30.159	Otolemur_garnettii
ENSHCOG00000017328	-	99	31.908	ENSPKIG00000012265	tdrd6	82	31.908	Paramormyrops_kingsleyae
ENSHCOG00000017328	-	99	43.510	ENSPMGG00000000674	-	99	43.510	Periophthalmus_magnuspinnatus
ENSHCOG00000017328	-	99	42.246	ENSPMGG00000014626	tdrd6	99	42.246	Periophthalmus_magnuspinnatus
ENSHCOG00000017328	-	99	37.500	ENSPFOG00000012487	tdrd6	99	32.031	Poecilia_formosa
ENSHCOG00000017328	-	99	37.981	ENSPLAG00000020472	tdrd6	76	37.981	Poecilia_latipinna
ENSHCOG00000017328	-	99	37.500	ENSPMEG00000000075	tdrd6	76	37.500	Poecilia_mexicana
ENSHCOG00000017328	-	99	37.037	ENSPREG00000018829	tdrd6	77	37.037	Poecilia_reticulata
ENSHCOG00000017328	-	89	32.095	ENSPCAG00000012381	TDRD6	64	32.095	Procavia_capensis
ENSHCOG00000017328	-	99	30.804	ENSPCOG00000011534	TDRD6	84	30.804	Propithecus_coquereli
ENSHCOG00000017328	-	94	37.173	ENSPNYG00000021847	tdrd6	87	37.173	Pundamilia_nyererei
ENSHCOG00000017328	-	99	51.031	ENSPNYG00000008466	-	99	51.031	Pundamilia_nyererei
ENSHCOG00000017328	-	99	40.865	ENSPNAG00000008860	tdrd6	87	40.865	Pygocentrus_nattereri
ENSHCOG00000017328	-	100	41.799	ENSPNAG00000000359	si:ch211-189e2.3	92	41.799	Pygocentrus_nattereri
ENSHCOG00000017328	-	99	30.769	ENSRNOG00000025693	Tdrd6	83	30.769	Rattus_norvegicus
ENSHCOG00000017328	-	99	33.490	ENSSFOG00015014356	tdrd6	77	33.490	Scleropages_formosus
ENSHCOG00000017328	-	99	34.400	ENSSMAG00000004490	tdrd6	88	34.400	Scophthalmus_maximus
ENSHCOG00000017328	-	99	53.972	ENSSMAG00000014450	-	99	53.972	Scophthalmus_maximus
ENSHCOG00000017328	-	99	55.425	ENSSDUG00000007597	-	99	55.425	Seriola_dumerili
ENSHCOG00000017328	-	96	40.212	ENSSDUG00000006559	tdrd6	77	40.212	Seriola_dumerili
ENSHCOG00000017328	-	96	38.389	ENSSLDG00000004470	tdrd6	73	38.389	Seriola_lalandi_dorsalis
ENSHCOG00000017328	-	99	55.660	ENSSLDG00000002178	-	99	55.660	Seriola_lalandi_dorsalis
ENSHCOG00000017328	-	99	30.732	ENSSARG00000005817	TDRD6	83	30.732	Sorex_araneus
ENSHCOG00000017328	-	99	36.123	ENSSPAG00000013194	tdrd6	92	36.123	Stegastes_partitus
ENSHCOG00000017328	-	80	36.176	ENSTRUG00000006534	-	80	36.176	Takifugu_rubripes
ENSHCOG00000017328	-	99	52.174	ENSTRUG00000023197	-	98	52.174	Takifugu_rubripes
ENSHCOG00000017328	-	77	41.058	ENSTNIG00000019317	-	87	41.058	Tetraodon_nigroviridis
ENSHCOG00000017328	-	99	32.159	ENSUAMG00000014941	TDRD6	83	32.159	Ursus_americanus
ENSHCOG00000017328	-	84	30.932	ENSUMAG00000005127	TDRD6	76	30.932	Ursus_maritimus
ENSHCOG00000017328	-	99	31.556	ENSVVUG00000029302	TDRD6	83	31.556	Vulpes_vulpes
ENSHCOG00000017328	-	91	35.193	ENSXCOG00000008476	tdrd6	95	35.193	Xiphophorus_couchianus
ENSHCOG00000017328	-	99	36.538	ENSXMAG00000025787	tdrd6	78	36.538	Xiphophorus_maculatus