EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000017400 (Gene tree)
Gene ID: 109515310
Gene Symbol: sympk
Alias: si:dkeyp-117b8.1
Full Name: symplekin
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 9412 bases
Position: chrKV879701.1:19333-28744
Accession: 109515310
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000026433	Symplekin_C	PF12295.8	2.3e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000021599	-	3513	XM_019868996	ENSHCOP00000026433	1170 (aa)	XP_019724555	-

Gene Model

Click here to download ENSHCOG00000017400's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03015	mRNA surveillance pathway	KEGG
hcq04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017400	sympk	91	70.394	ENSG00000125755	SYMPK	81	80.519	Homo_sapiens
ENSHCOG00000017400	sympk	97	81.888	ENSAPOG00000015934	sympk	98	83.446	Acanthochromis_polyacanthus
ENSHCOG00000017400	sympk	91	70.394	ENSAMEG00000000680	SYMPK	85	70.394	Ailuropoda_melanoleuca
ENSHCOG00000017400	sympk	91	84.622	ENSACIG00000006357	sympk	92	84.622	Amphilophus_citrinellus
ENSHCOG00000017400	sympk	97	81.405	ENSAOCG00000024124	sympk	92	86.242	Amphiprion_ocellaris
ENSHCOG00000017400	sympk	97	81.405	ENSAPEG00000003465	sympk	89	85.662	Amphiprion_percula
ENSHCOG00000017400	sympk	98	80.237	ENSATEG00000008472	sympk	89	85.083	Anabas_testudineus
ENSHCOG00000017400	sympk	83	69.700	ENSACAG00000004126	SYMPK	84	69.700	Anolis_carolinensis
ENSHCOG00000017400	sympk	90	70.702	ENSANAG00000021087	SYMPK	96	71.040	Aotus_nancymaae
ENSHCOG00000017400	sympk	90	85.175	ENSACLG00000001813	sympk	89	85.175	Astatotilapia_calliptera
ENSHCOG00000017400	sympk	90	77.222	ENSAMXG00000013677	sympk	88	77.685	Astyanax_mexicanus
ENSHCOG00000017400	sympk	91	70.496	ENSBTAG00000012101	SYMPK	85	70.486	Bos_taurus
ENSHCOG00000017400	sympk	90	70.702	ENSCJAG00000012172	SYMPK	96	69.485	Callithrix_jacchus
ENSHCOG00000017400	sympk	91	70.577	ENSCAFG00000004376	SYMPK	85	70.577	Canis_familiaris
ENSHCOG00000017400	sympk	91	70.577	ENSCAFG00020001815	SYMPK	85	70.577	Canis_lupus_dingo
ENSHCOG00000017400	sympk	91	70.588	ENSCHIG00000026784	SYMPK	85	70.577	Capra_hircus
ENSHCOG00000017400	sympk	91	70.707	ENSTSYG00000006268	SYMPK	95	68.038	Carlito_syrichta
ENSHCOG00000017400	sympk	86	69.396	ENSCAPG00000005112	SYMPK	93	69.396	Cavia_aperea
ENSHCOG00000017400	sympk	91	70.486	ENSCPOG00000010434	SYMPK	87	70.486	Cavia_porcellus
ENSHCOG00000017400	sympk	91	70.302	ENSCCAG00000036309	SYMPK	96	70.797	Cebus_capucinus
ENSHCOG00000017400	sympk	91	70.615	ENSCATG00000045107	SYMPK	97	70.769	Cercocebus_atys
ENSHCOG00000017400	sympk	90	70.795	ENSCLAG00000001206	SYMPK	85	70.394	Chinchilla_lanigera
ENSHCOG00000017400	sympk	91	70.486	ENSCSAG00000003115	SYMPK	85	70.486	Chlorocebus_sabaeus
ENSHCOG00000017400	sympk	67	84.746	ENSCHOG00000012456	SYMPK	72	84.746	Choloepus_hoffmanni
ENSHCOG00000017400	sympk	90	71.113	ENSCPBG00000007170	SYMPK	88	70.243	Chrysemys_picta_bellii
ENSHCOG00000017400	sympk	94	43.855	ENSCING00000021232	-	97	45.122	Ciona_intestinalis
ENSHCOG00000017400	sympk	87	46.628	ENSCSAVG00000005154	-	100	46.878	Ciona_savignyi
ENSHCOG00000017400	sympk	91	69.119	ENSCANG00000040907	SYMPK	96	68.366	Colobus_angolensis_palliatus
ENSHCOG00000017400	sympk	81	69.679	ENSCGRG00001010086	Sympk	83	69.679	Cricetulus_griseus_chok1gshd
ENSHCOG00000017400	sympk	96	79.170	ENSCSEG00000016802	sympk	88	84.055	Cynoglossus_semilaevis
ENSHCOG00000017400	sympk	96	73.639	ENSDARG00000059553	sympk	86	77.737	Danio_rerio
ENSHCOG00000017400	sympk	91	70.027	ENSDNOG00000016149	SYMPK	85	70.027	Dasypus_novemcinctus
ENSHCOG00000017400	sympk	91	34.681	FBgn0037371	Sym	94	34.681	Drosophila_melanogaster
ENSHCOG00000017400	sympk	70	56.639	ENSEBUG00000000387	sympk	89	55.188	Eptatretus_burgeri
ENSHCOG00000017400	sympk	91	70.799	ENSEASG00005014227	SYMPK	85	70.799	Equus_asinus_asinus
ENSHCOG00000017400	sympk	91	70.799	ENSECAG00000008163	SYMPK	85	70.799	Equus_caballus
ENSHCOG00000017400	sympk	70	82.927	ENSEEUG00000000270	-	77	82.927	Erinaceus_europaeus
ENSHCOG00000017400	sympk	90	80.037	ENSELUG00000000850	sympk	87	79.401	Esox_lucius
ENSHCOG00000017400	sympk	91	70.577	ENSFCAG00000007337	SYMPK	85	70.577	Felis_catus
ENSHCOG00000017400	sympk	91	70.340	ENSFDAG00000011272	SYMPK	85	70.340	Fukomys_damarensis
ENSHCOG00000017400	sympk	90	83.948	ENSFHEG00000010274	sympk	90	82.956	Fundulus_heteroclitus
ENSHCOG00000017400	sympk	90	79.236	ENSGMOG00000002357	sympk	99	79.236	Gadus_morhua
ENSHCOG00000017400	sympk	91	82.645	ENSGAFG00000010976	sympk	89	82.645	Gambusia_affinis
ENSHCOG00000017400	sympk	98	78.921	ENSGACG00000002735	sympk	98	83.440	Gasterosteus_aculeatus
ENSHCOG00000017400	sympk	58	70.520	ENSGAGG00000012538	-	88	69.785	Gopherus_agassizii
ENSHCOG00000017400	sympk	91	70.394	ENSGGOG00000003410	SYMPK	95	70.172	Gorilla_gorilla
ENSHCOG00000017400	sympk	90	85.083	ENSHBUG00000023564	sympk	89	85.083	Haplochromis_burtoni
ENSHCOG00000017400	sympk	91	66.361	ENSHGLG00000005228	SYMPK	85	66.361	Heterocephalus_glaber_female
ENSHCOG00000017400	sympk	91	70.273	ENSHGLG00100018571	SYMPK	88	70.273	Heterocephalus_glaber_male
ENSHCOG00000017400	sympk	89	77.273	ENSIPUG00000024020	SYMPK	87	76.980	Ictalurus_punctatus
ENSHCOG00000017400	sympk	91	70.983	ENSSTOG00000001534	SYMPK	85	70.983	Ictidomys_tridecemlineatus
ENSHCOG00000017400	sympk	91	70.577	ENSJJAG00000006633	Sympk	85	70.577	Jaculus_jaculus
ENSHCOG00000017400	sympk	91	83.547	ENSKMAG00000016292	sympk	90	83.638	Kryptolebias_marmoratus
ENSHCOG00000017400	sympk	90	84.530	ENSLBEG00000027913	sympk	94	81.343	Labrus_bergylta
ENSHCOG00000017400	sympk	89	66.235	ENSLACG00000016497	SYMPK	90	66.790	Latimeria_chalumnae
ENSHCOG00000017400	sympk	91	70.669	ENSLAFG00000008726	SYMPK	85	70.669	Loxodonta_africana
ENSHCOG00000017400	sympk	91	70.486	ENSMMUG00000015428	SYMPK	93	67.901	Macaca_mulatta
ENSHCOG00000017400	sympk	91	70.604	ENSMNEG00000019439	SYMPK	97	70.769	Macaca_nemestrina
ENSHCOG00000017400	sympk	91	70.486	ENSMLEG00000040508	SYMPK	97	70.769	Mandrillus_leucophaeus
ENSHCOG00000017400	sympk	99	79.681	ENSMAMG00000010486	sympk	91	83.648	Mastacembelus_armatus
ENSHCOG00000017400	sympk	90	85.175	ENSMZEG00005014146	sympk	89	85.175	Maylandia_zebra
ENSHCOG00000017400	sympk	89	70.363	ENSMAUG00000015657	Sympk	84	70.363	Mesocricetus_auratus
ENSHCOG00000017400	sympk	91	70.211	ENSMICG00000001871	SYMPK	89	68.910	Microcebus_murinus
ENSHCOG00000017400	sympk	91	70.486	ENSMOCG00000008388	Sympk	85	70.486	Microtus_ochrogaster
ENSHCOG00000017400	sympk	91	82.348	ENSMMOG00000019227	sympk	93	82.348	Mola_mola
ENSHCOG00000017400	sympk	90	71.204	ENSMODG00000021534	SYMPK	85	71.205	Monodelphis_domestica
ENSHCOG00000017400	sympk	78	79.452	ENSMALG00000008347	sympk	96	79.874	Monopterus_albus
ENSHCOG00000017400	sympk	91	70.486	MGP_CAROLIEiJ_G0029267	Sympk	77	86.239	Mus_caroli
ENSHCOG00000017400	sympk	91	70.394	ENSMUSG00000023118	Sympk	76	86.239	Mus_musculus
ENSHCOG00000017400	sympk	91	70.577	MGP_PahariEiJ_G0021127	Sympk	77	86.239	Mus_pahari
ENSHCOG00000017400	sympk	91	70.486	MGP_SPRETEiJ_G0030351	-	77	86.239	Mus_spretus
ENSHCOG00000017400	sympk	91	69.273	ENSMPUG00000005505	SYMPK	85	69.273	Mustela_putorius_furo
ENSHCOG00000017400	sympk	74	66.556	ENSMLUG00000001359	SYMPK	89	66.556	Myotis_lucifugus
ENSHCOG00000017400	sympk	91	70.577	ENSNGAG00000000820	Sympk	85	70.577	Nannospalax_galili
ENSHCOG00000017400	sympk	88	85.056	ENSNBRG00000018101	sympk	91	85.056	Neolamprologus_brichardi
ENSHCOG00000017400	sympk	91	63.552	ENSNLEG00000002369	SYMPK	84	63.645	Nomascus_leucogenys
ENSHCOG00000017400	sympk	72	65.976	ENSMEUG00000003866	SYMPK	65	69.388	Notamacropus_eugenii
ENSHCOG00000017400	sympk	91	69.146	ENSOPRG00000009967	SYMPK	84	69.146	Ochotona_princeps
ENSHCOG00000017400	sympk	91	70.577	ENSODEG00000007519	SYMPK	85	70.577	Octodon_degus
ENSHCOG00000017400	sympk	90	84.587	ENSONIG00000016802	sympk	94	84.587	Oreochromis_niloticus
ENSHCOG00000017400	sympk	78	68.837	ENSOCUG00000005511	SYMPK	87	68.837	Oryctolagus_cuniculus
ENSHCOG00000017400	sympk	91	82.815	ENSORLG00000015338	sympk	96	82.203	Oryzias_latipes
ENSHCOG00000017400	sympk	91	82.907	ENSORLG00020004402	sympk	90	82.907	Oryzias_latipes_hni
ENSHCOG00000017400	sympk	91	82.815	ENSORLG00015005712	sympk	90	82.815	Oryzias_latipes_hsok
ENSHCOG00000017400	sympk	97	79.124	ENSOMEG00000022561	sympk	90	83.487	Oryzias_melastigma
ENSHCOG00000017400	sympk	91	70.302	ENSOGAG00000013483	SYMPK	85	70.302	Otolemur_garnettii
ENSHCOG00000017400	sympk	89	69.496	ENSOARG00000010349	SYMPK	84	69.488	Ovis_aries
ENSHCOG00000017400	sympk	91	70.394	ENSPPAG00000043204	SYMPK	94	67.764	Pan_paniscus
ENSHCOG00000017400	sympk	91	70.577	ENSPPRG00000004282	SYMPK	85	70.577	Panthera_pardus
ENSHCOG00000017400	sympk	91	70.155	ENSPTIG00000015420	SYMPK	92	70.155	Panthera_tigris_altaica
ENSHCOG00000017400	sympk	91	70.394	ENSPTRG00000011169	SYMPK	94	67.764	Pan_troglodytes
ENSHCOG00000017400	sympk	91	70.486	ENSPANG00000019930	SYMPK	97	70.769	Papio_anubis
ENSHCOG00000017400	sympk	91	78.415	ENSPKIG00000017132	sympk	88	79.053	Paramormyrops_kingsleyae
ENSHCOG00000017400	sympk	91	70.577	ENSPEMG00000007564	Sympk	85	70.577	Peromyscus_maniculatus_bairdii
ENSHCOG00000017400	sympk	86	61.032	ENSPMAG00000004936	sympk	100	61.414	Petromyzon_marinus
ENSHCOG00000017400	sympk	94	69.251	ENSPCIG00000024476	SYMPK	89	69.382	Phascolarctos_cinereus
ENSHCOG00000017400	sympk	91	82.797	ENSPFOG00000001194	sympk	89	82.797	Poecilia_formosa
ENSHCOG00000017400	sympk	91	82.797	ENSPLAG00000012995	sympk	89	82.797	Poecilia_latipinna
ENSHCOG00000017400	sympk	91	82.613	ENSPMEG00000008099	sympk	89	82.613	Poecilia_mexicana
ENSHCOG00000017400	sympk	91	82.277	ENSPREG00000006176	sympk	90	81.985	Poecilia_reticulata
ENSHCOG00000017400	sympk	90	70.659	ENSPPYG00000010135	SYMPK	96	70.659	Pongo_abelii
ENSHCOG00000017400	sympk	84	73.742	ENSPCAG00000005182	SYMPK	79	73.742	Procavia_capensis
ENSHCOG00000017400	sympk	91	70.302	ENSPCOG00000023740	SYMPK	96	70.549	Propithecus_coquereli
ENSHCOG00000017400	sympk	91	69.203	ENSPVAG00000001355	SYMPK	87	69.203	Pteropus_vampyrus
ENSHCOG00000017400	sympk	90	84.991	ENSPNYG00000011455	sympk	88	84.991	Pundamilia_nyererei
ENSHCOG00000017400	sympk	91	77.211	ENSPNAG00000016505	sympk	87	77.211	Pygocentrus_nattereri
ENSHCOG00000017400	sympk	91	70.577	ENSRNOG00000014353	Sympk	84	70.577	Rattus_norvegicus
ENSHCOG00000017400	sympk	91	70.615	ENSRBIG00000040963	SYMPK	96	70.971	Rhinopithecus_bieti
ENSHCOG00000017400	sympk	91	70.486	ENSRROG00000024834	SYMPK	94	70.600	Rhinopithecus_roxellana
ENSHCOG00000017400	sympk	90	70.610	ENSSBOG00000034497	SYMPK	95	67.764	Saimiri_boliviensis_boliviensis
ENSHCOG00000017400	sympk	90	69.945	ENSSHAG00000003139	SYMPK	94	69.945	Sarcophilus_harrisii
ENSHCOG00000017400	sympk	91	77.387	ENSSFOG00015006974	sympk	89	77.597	Scleropages_formosus
ENSHCOG00000017400	sympk	97	81.545	ENSSMAG00000018130	sympk	71	85.451	Scophthalmus_maximus
ENSHCOG00000017400	sympk	97	80.989	ENSSDUG00000007092	sympk	89	85.570	Seriola_dumerili
ENSHCOG00000017400	sympk	97	80.989	ENSSLDG00000014774	sympk	97	82.420	Seriola_lalandi_dorsalis
ENSHCOG00000017400	sympk	58	84.615	ENSSARG00000004274	-	57	84.615	Sorex_araneus
ENSHCOG00000017400	sympk	91	70.000	ENSSPUG00000002789	SYMPK	84	69.973	Sphenodon_punctatus
ENSHCOG00000017400	sympk	91	84.330	ENSSPAG00000000854	sympk	92	82.502	Stegastes_partitus
ENSHCOG00000017400	sympk	91	70.577	ENSSSCG00000003093	SYMPK	85	70.577	Sus_scrofa
ENSHCOG00000017400	sympk	94	81.891	ENSTRUG00000010202	sympk	90	82.938	Takifugu_rubripes
ENSHCOG00000017400	sympk	89	83.784	ENSTNIG00000017855	sympk	97	82.784	Tetraodon_nigroviridis
ENSHCOG00000017400	sympk	80	74.825	ENSTBEG00000000454	SYMPK	73	74.825	Tupaia_belangeri
ENSHCOG00000017400	sympk	91	64.922	ENSTTRG00000014311	SYMPK	85	64.922	Tursiops_truncatus
ENSHCOG00000017400	sympk	91	68.981	ENSUAMG00000022272	SYMPK	89	70.408	Ursus_americanus
ENSHCOG00000017400	sympk	91	70.394	ENSUMAG00000023698	SYMPK	85	70.394	Ursus_maritimus
ENSHCOG00000017400	sympk	90	70.887	ENSVVUG00000003024	SYMPK	94	70.887	Vulpes_vulpes
ENSHCOG00000017400	sympk	96	61.438	ENSXETG00000024453	sympk	90	64.404	Xenopus_tropicalis
ENSHCOG00000017400	sympk	89	82.047	ENSXCOG00000015368	sympk	99	82.047	Xiphophorus_couchianus
ENSHCOG00000017400	sympk	90	82.934	ENSXMAG00000005737	sympk	89	82.934	Xiphophorus_maculatus