EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000017456 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2705 bases
Position: chrKV880190.1:3244843-3247547
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000014167	zf-C2H2	PF00096.26	4.4e-40	1	7
ENSHCOP00000014167	zf-C2H2	PF00096.26	4.4e-40	2	7
ENSHCOP00000014167	zf-C2H2	PF00096.26	4.4e-40	3	7
ENSHCOP00000014167	zf-C2H2	PF00096.26	4.4e-40	4	7
ENSHCOP00000014167	zf-C2H2	PF00096.26	4.4e-40	5	7
ENSHCOP00000014167	zf-C2H2	PF00096.26	4.4e-40	6	7
ENSHCOP00000014167	zf-C2H2	PF00096.26	4.4e-40	7	7
ENSHCOP00000014167	zf-met	PF12874.7	8.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027582	-	819	-	ENSHCOP00000014167	272 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000017456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017456's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000017456	-	87	49.510	ENSHCOG00000011432	-	91	49.510
ENSHCOG00000017456	-	86	59.669	ENSHCOG00000011433	-	71	56.306
ENSHCOG00000017456	-	96	59.833	ENSHCOG00000007990	-	72	59.833
ENSHCOG00000017456	-	86	51.073	ENSHCOG00000014777	-	70	51.073
ENSHCOG00000017456	-	86	61.506	ENSHCOG00000001308	-	69	62.189
ENSHCOG00000017456	-	91	60.000	ENSHCOG00000021028	-	91	60.000
ENSHCOG00000017456	-	90	36.184	ENSHCOG00000008116	scrt2	50	36.184
ENSHCOG00000017456	-	87	59.052	ENSHCOG00000020984	-	80	59.052
ENSHCOG00000017456	-	90	56.774	ENSHCOG00000019481	-	71	51.429
ENSHCOG00000017456	-	88	59.756	ENSHCOG00000015105	-	97	56.250
ENSHCOG00000017456	-	95	55.556	ENSHCOG00000014781	-	54	55.556
ENSHCOG00000017456	-	99	49.791	ENSHCOG00000001252	-	97	49.793
ENSHCOG00000017456	-	96	60.000	ENSHCOG00000001256	-	66	60.000
ENSHCOG00000017456	-	99	56.306	ENSHCOG00000015000	-	78	56.306
ENSHCOG00000017456	-	94	37.037	ENSHCOG00000016704	scrt1b	55	37.037
ENSHCOG00000017456	-	93	62.791	ENSHCOG00000015355	-	86	66.102
ENSHCOG00000017456	-	86	55.446	ENSHCOG00000001631	-	54	55.063
ENSHCOG00000017456	-	87	58.454	ENSHCOG00000001638	-	76	59.307
ENSHCOG00000017456	-	95	56.769	ENSHCOG00000001448	-	62	56.769
ENSHCOG00000017456	-	93	43.915	ENSHCOG00000003041	-	92	47.143
ENSHCOG00000017456	-	88	61.039	ENSHCOG00000020972	-	93	61.039
ENSHCOG00000017456	-	93	50.676	ENSHCOG00000015010	-	60	50.676
ENSHCOG00000017456	-	86	58.523	ENSHCOG00000000627	-	53	56.150
ENSHCOG00000017456	-	95	48.291	ENSHCOG00000013489	-	88	48.291
ENSHCOG00000017456	-	87	60.173	ENSHCOG00000015425	-	75	60.173
ENSHCOG00000017456	-	88	47.619	ENSHCOG00000004879	znf341	54	47.619
ENSHCOG00000017456	-	87	57.955	ENSHCOG00000012175	-	87	57.955
ENSHCOG00000017456	-	92	57.080	ENSHCOG00000008906	-	80	57.080
ENSHCOG00000017456	-	88	56.983	ENSHCOG00000012592	-	54	56.354
ENSHCOG00000017456	-	84	56.497	ENSHCOG00000020924	-	61	55.026
ENSHCOG00000017456	-	93	56.250	ENSHCOG00000021033	-	71	56.250
ENSHCOG00000017456	-	86	56.383	ENSHCOG00000001300	-	81	56.383
ENSHCOG00000017456	-	95	53.125	ENSHCOG00000008742	-	77	53.125
ENSHCOG00000017456	-	89	48.101	ENSHCOG00000010282	znf236	67	48.101
ENSHCOG00000017456	-	87	64.286	ENSHCOG00000015484	-	65	64.286
ENSHCOG00000017456	-	82	42.857	ENSHCOG00000013713	gfi1b	51	41.104
ENSHCOG00000017456	-	89	58.929	ENSHCOG00000019385	-	73	58.929
ENSHCOG00000017456	-	86	36.782	ENSHCOG00000011612	zfat	54	36.782
ENSHCOG00000017456	-	89	58.706	ENSHCOG00000008550	-	59	55.140
ENSHCOG00000017456	-	94	38.372	ENSHCOG00000020556	-	57	38.372
ENSHCOG00000017456	-	89	60.000	ENSHCOG00000020940	-	63	60.000
ENSHCOG00000017456	-	86	58.940	ENSHCOG00000009009	-	62	54.762
ENSHCOG00000017456	-	91	56.485	ENSHCOG00000001883	-	84	56.485
ENSHCOG00000017456	-	87	52.609	ENSHCOG00000015005	-	51	52.609
ENSHCOG00000017456	-	86	56.322	ENSHCOG00000015459	-	88	56.322
ENSHCOG00000017456	-	87	60.714	ENSHCOG00000012662	-	85	60.714
ENSHCOG00000017456	-	90	52.752	ENSHCOG00000000947	-	69	52.752
ENSHCOG00000017456	-	86	62.719	ENSHCOG00000020993	-	60	62.719
ENSHCOG00000017456	-	87	52.423	ENSHCOG00000014986	-	80	52.423
ENSHCOG00000017456	-	88	64.706	ENSHCOG00000015463	-	61	64.706
ENSHCOG00000017456	-	83	51.232	ENSHCOG00000019541	-	60	48.611
ENSHCOG00000017456	-	87	40.167	ENSHCOG00000006286	ZNF319	95	40.167
ENSHCOG00000017456	-	97	51.250	ENSHCOG00000014713	-	97	53.219
ENSHCOG00000017456	-	86	32.812	ENSHCOG00000008686	-	83	33.186
ENSHCOG00000017456	-	89	58.706	ENSHCOG00000001873	-	59	55.140
ENSHCOG00000017456	-	93	58.462	ENSHCOG00000008168	-	98	53.017
ENSHCOG00000017456	-	87	52.000	ENSHCOG00000007358	-	72	54.070
ENSHCOG00000017456	-	91	48.347	ENSHCOG00000007351	-	75	48.347
ENSHCOG00000017456	-	91	52.980	ENSHCOG00000019454	-	55	69.231
ENSHCOG00000017456	-	89	51.370	ENSHCOG00000019458	-	51	46.541
ENSHCOG00000017456	-	84	62.500	ENSHCOG00000008205	-	81	57.812
ENSHCOG00000017456	-	95	51.471	ENSHCOG00000001338	-	89	51.471
ENSHCOG00000017456	-	93	39.785	ENSHCOG00000000800	-	78	39.785
ENSHCOG00000017456	-	93	51.037	ENSHCOG00000001272	-	97	53.913
ENSHCOG00000017456	-	96	41.485	ENSHCOG00000015231	-	63	44.048
ENSHCOG00000017456	-	87	39.608	ENSHCOG00000015237	-	66	39.608
ENSHCOG00000017456	-	83	49.242	ENSHCOG00000014850	-	53	48.819
ENSHCOG00000017456	-	99	50.209	ENSHCOG00000021073	-	79	50.209
ENSHCOG00000017456	-	93	51.293	ENSHCOG00000001238	-	89	51.293
ENSHCOG00000017456	-	87	55.208	ENSHCOG00000020856	-	78	56.067
ENSHCOG00000017456	-	93	35.928	ENSHCOG00000014887	-	72	35.928
ENSHCOG00000017456	-	94	47.000	ENSHCOG00000014881	-	72	45.740
ENSHCOG00000017456	-	88	59.414	ENSHCOG00000015441	-	68	61.233
ENSHCOG00000017456	-	93	41.379	ENSHCOG00000018201	-	87	41.379
ENSHCOG00000017456	-	82	44.172	ENSHCOG00000019555	GFI1	53	44.172
ENSHCOG00000017456	-	99	51.724	ENSHCOG00000014797	-	58	52.778
ENSHCOG00000017456	-	95	53.070	ENSHCOG00000007681	-	90	53.070
ENSHCOG00000017456	-	88	55.217	ENSHCOG00000020909	-	78	55.217
ENSHCOG00000017456	-	83	58.462	ENSHCOG00000015414	-	64	60.241
ENSHCOG00000017456	-	92	48.235	ENSHCOG00000012131	prdm5	73	48.235
ENSHCOG00000017456	-	95	51.887	ENSHCOG00000001318	-	95	49.784
ENSHCOG00000017456	-	89	47.872	ENSHCOG00000008234	-	72	47.872
ENSHCOG00000017456	-	87	41.667	ENSHCOG00000019435	SNAI2	55	41.667
ENSHCOG00000017456	-	88	55.462	ENSHCOG00000019438	-	87	55.462
ENSHCOG00000017456	-	91	51.149	ENSHCOG00000014786	-	94	50.000
ENSHCOG00000017456	-	86	61.983	ENSHCOG00000002969	-	50	60.000
ENSHCOG00000017456	-	88	58.667	ENSHCOG00000020848	-	64	58.667
ENSHCOG00000017456	-	90	51.786	ENSHCOG00000020846	-	62	51.786
ENSHCOG00000017456	-	88	45.588	ENSHCOG00000001901	si:dkey-89b17.4	71	31.225
ENSHCOG00000017456	-	86	57.741	ENSHCOG00000015386	-	84	57.500
ENSHCOG00000017456	-	87	53.750	ENSHCOG00000013455	-	87	51.064
ENSHCOG00000017456	-	86	64.615	ENSHCOG00000015476	-	91	62.185
ENSHCOG00000017456	-	87	54.502	ENSHCOG00000001793	-	71	53.797
ENSHCOG00000017456	-	93	52.479	ENSHCOG00000001345	-	80	52.479
ENSHCOG00000017456	-	87	58.333	ENSHCOG00000018977	-	60	58.333
ENSHCOG00000017456	-	86	60.494	ENSHCOG00000003021	-	51	60.494
ENSHCOG00000017456	-	88	41.615	ENSHCOG00000015246	-	60	38.202
ENSHCOG00000017456	-	86	41.111	ENSHCOG00000015241	-	66	39.450
ENSHCOG00000017456	-	99	56.967	ENSHCOG00000008028	-	82	56.967
ENSHCOG00000017456	-	95	55.882	ENSHCOG00000011411	-	79	55.319
ENSHCOG00000017456	-	88	36.029	ENSHCOG00000016179	-	50	38.261
ENSHCOG00000017456	-	96	55.224	ENSHCOG00000007485	-	94	59.524
ENSHCOG00000017456	-	93	58.824	ENSHCOG00000019497	-	77	58.824
ENSHCOG00000017456	-	87	65.789	ENSHCOG00000015497	-	74	65.789
ENSHCOG00000017456	-	89	59.483	ENSHCOG00000019512	-	89	59.483
ENSHCOG00000017456	-	89	39.091	ENSHCOG00000000511	-	87	39.189
ENSHCOG00000017456	-	93	49.145	ENSHCOG00000000517	-	76	49.145
ENSHCOG00000017456	-	87	41.558	ENSHCOG00000008181	-	74	41.558
ENSHCOG00000017456	-	86	40.500	ENSHCOG00000008227	-	55	44.643
ENSHCOG00000017456	-	84	48.148	ENSHCOG00000001313	-	56	48.148
ENSHCOG00000017456	-	87	52.907	ENSHCOG00000001292	-	73	47.959
ENSHCOG00000017456	-	86	51.429	ENSHCOG00000014874	-	60	51.429
ENSHCOG00000017456	-	89	52.027	ENSHCOG00000008133	-	59	52.027
ENSHCOG00000017456	-	92	52.444	ENSHCOG00000017437	-	77	52.444
ENSHCOG00000017456	-	97	58.667	ENSHCOG00000001942	-	94	58.667
ENSHCOG00000017456	-	86	63.636	ENSHCOG00000019465	-	75	63.636
ENSHCOG00000017456	-	87	57.709	ENSHCOG00000020879	-	67	58.960
ENSHCOG00000017456	-	86	51.220	ENSHCOG00000020670	-	88	51.220
ENSHCOG00000017456	-	87	48.235	ENSHCOG00000010332	-	58	48.235
ENSHCOG00000017456	-	90	52.542	ENSHCOG00000014796	-	65	52.542
ENSHCOG00000017456	-	87	52.586	ENSHCOG00000014792	-	50	52.143
ENSHCOG00000017456	-	92	50.370	ENSHCOG00000008601	-	86	50.370
ENSHCOG00000017456	-	92	58.929	ENSHCOG00000012617	-	80	58.929
ENSHCOG00000017456	-	95	51.232	ENSHCOG00000001245	-	68	51.232
ENSHCOG00000017456	-	87	53.247	ENSHCOG00000001242	-	61	53.247
ENSHCOG00000017456	-	95	59.657	ENSHCOG00000003085	-	68	59.657
ENSHCOG00000017456	-	95	53.814	ENSHCOG00000001629	-	67	53.275
ENSHCOG00000017456	-	97	56.731	ENSHCOG00000007664	-	97	55.310
ENSHCOG00000017456	-	86	52.055	ENSHCOG00000019006	-	50	52.055
ENSHCOG00000017456	-	88	50.990	ENSHCOG00000019001	-	93	50.990
ENSHCOG00000017456	-	96	39.462	ENSHCOG00000015639	znf319b	91	39.462
ENSHCOG00000017456	-	89	57.563	ENSHCOG00000000138	-	61	59.211
ENSHCOG00000017456	-	88	57.627	ENSHCOG00000020725	-	65	61.039
ENSHCOG00000017456	-	88	43.103	ENSHCOG00000002898	-	58	43.103

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017456	-	92	47.867	ENSACAG00000026916	-	81	47.867	Anolis_carolinensis
ENSHCOG00000017456	-	89	48.707	ENSACAG00000027001	-	99	48.707	Anolis_carolinensis
ENSHCOG00000017456	-	95	49.351	ENSACAG00000026906	-	98	49.351	Anolis_carolinensis
ENSHCOG00000017456	-	86	47.500	ENSAMXG00000038122	-	98	47.500	Astyanax_mexicanus
ENSHCOG00000017456	-	93	42.291	ENSAMXG00000014745	-	82	41.579	Astyanax_mexicanus
ENSHCOG00000017456	-	87	46.207	ENSELUG00000011838	-	64	40.157	Esox_lucius
ENSHCOG00000017456	-	96	50.417	ENSELUG00000000485	-	88	47.887	Esox_lucius
ENSHCOG00000017456	-	99	41.364	ENSELUG00000013806	-	66	42.324	Esox_lucius
ENSHCOG00000017456	-	96	47.368	ENSELUG00000021525	-	72	47.368	Esox_lucius
ENSHCOG00000017456	-	93	43.448	ENSELUG00000018970	-	80	43.448	Esox_lucius
ENSHCOG00000017456	-	99	42.917	ENSGACG00000001523	-	99	42.917	Gasterosteus_aculeatus
ENSHCOG00000017456	-	86	44.492	ENSHBUG00000016384	-	84	44.492	Haplochromis_burtoni
ENSHCOG00000017456	-	93	43.333	ENSLBEG00000013235	-	80	43.333	Labrus_bergylta
ENSHCOG00000017456	-	93	44.545	ENSMGAG00000016603	-	100	44.545	Meleagris_gallopavo
ENSHCOG00000017456	-	96	47.982	ENSPNAG00000009184	-	83	48.198	Pygocentrus_nattereri
ENSHCOG00000017456	-	98	46.875	ENSPNAG00000009176	-	89	46.875	Pygocentrus_nattereri
ENSHCOG00000017456	-	94	36.508	ENSSFOG00015020993	-	92	39.286	Scleropages_formosus
ENSHCOG00000017456	-	84	36.522	ENSTNIG00000000528	-	96	36.522	Tetraodon_nigroviridis
ENSHCOG00000017456	-	90	41.667	ENSTNIG00000002343	-	88	41.667	Tetraodon_nigroviridis
ENSHCOG00000017456	-	88	46.983	ENSXMAG00000020042	-	65	46.983	Xiphophorus_maculatus