EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000017501 (Gene tree)
Gene ID: 109515422
Gene Symbol: wdr3
Alias: sb:cb42|wu:fb92b07
Full Name: WD repeat domain 3
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 10243 bases
Position: chrKV879701.1:52-10294
Accession: 109515422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000014144	Utp12	PF04003.12	1.9e-19	1	1
ENSHCOP00000026476	Utp12	PF04003.12	7.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027575	-	2874	-	ENSHCOP00000014144	957 (aa)	-	-
ENSHCOT00000021682	-	4040	XM_019869199	ENSHCOP00000026476	870 (aa)	XP_019724758	-

Gene Model

Click here to download ENSHCOG00000017501's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017501's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000017501	wdr3	56	30.233	ENSHCOG00000016689	tbl3	61	30.233
ENSHCOG00000017501	wdr3	59	30.894	ENSHCOG00000013287	wdr5	90	30.894

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017501	wdr3	98	68.591	ENSG00000065183	WDR3	100	63.834	Homo_sapiens
ENSHCOG00000017501	wdr3	98	84.284	ENSAPOG00000005975	wdr3	96	83.353	Acanthochromis_polyacanthus
ENSHCOG00000017501	wdr3	97	68.538	ENSAMEG00000004339	WDR3	99	63.278	Ailuropoda_melanoleuca
ENSHCOG00000017501	wdr3	100	62.436	ENSACIG00000006993	wdr3	100	68.769	Amphilophus_citrinellus
ENSHCOG00000017501	wdr3	98	83.935	ENSAOCG00000023966	wdr3	96	83.003	Amphiprion_ocellaris
ENSHCOG00000017501	wdr3	98	84.051	ENSAPEG00000018223	wdr3	100	77.674	Amphiprion_percula
ENSHCOG00000017501	wdr3	98	83.469	ENSATEG00000000703	wdr3	100	76.812	Anabas_testudineus
ENSHCOG00000017501	wdr3	97	64.000	ENSACAG00000008210	WDR3	99	59.502	Anolis_carolinensis
ENSHCOG00000017501	wdr3	98	68.598	ENSANAG00000033348	WDR3	100	63.863	Aotus_nancymaae
ENSHCOG00000017501	wdr3	98	84.400	ENSACLG00000016975	wdr3	100	77.296	Astatotilapia_calliptera
ENSHCOG00000017501	wdr3	98	78.671	ENSAMXG00000005755	wdr3	100	71.875	Astyanax_mexicanus
ENSHCOG00000017501	wdr3	97	68.427	ENSBTAG00000019937	WDR3	100	63.523	Bos_taurus
ENSHCOG00000017501	wdr3	99	36.230	WBGene00017435	F13H8.2	97	33.718	Caenorhabditis_elegans
ENSHCOG00000017501	wdr3	98	68.134	ENSCJAG00000005749	WDR3	100	63.212	Callithrix_jacchus
ENSHCOG00000017501	wdr3	97	68.538	ENSCAFG00000009916	WDR3	99	63.392	Canis_familiaris
ENSHCOG00000017501	wdr3	86	68.063	ENSCAFG00020020610	WDR3	92	68.063	Canis_lupus_dingo
ENSHCOG00000017501	wdr3	97	68.427	ENSCHIG00000010490	WDR3	100	63.523	Capra_hircus
ENSHCOG00000017501	wdr3	97	68.150	ENSTSYG00000002158	WDR3	100	63.627	Carlito_syrichta
ENSHCOG00000017501	wdr3	95	58.079	ENSCAPG00000015805	WDR3	95	57.798	Cavia_aperea
ENSHCOG00000017501	wdr3	98	68.714	ENSCPOG00000011305	WDR3	100	63.005	Cavia_porcellus
ENSHCOG00000017501	wdr3	98	68.830	ENSCCAG00000037237	WDR3	99	63.863	Cebus_capucinus
ENSHCOG00000017501	wdr3	98	68.476	ENSCATG00000037200	WDR3	100	63.420	Cercocebus_atys
ENSHCOG00000017501	wdr3	98	68.397	ENSCLAG00000010657	WDR3	100	63.109	Chinchilla_lanigera
ENSHCOG00000017501	wdr3	98	68.129	ENSCSAG00000001705	WDR3	100	63.109	Chlorocebus_sabaeus
ENSHCOG00000017501	wdr3	87	71.429	ENSCHOG00000006428	WDR3	83	71.429	Choloepus_hoffmanni
ENSHCOG00000017501	wdr3	97	68.118	ENSCPBG00000001426	WDR3	94	68.990	Chrysemys_picta_bellii
ENSHCOG00000017501	wdr3	97	68.155	ENSCGRG00001019544	Wdr3	100	62.241	Cricetulus_griseus_chok1gshd
ENSHCOG00000017501	wdr3	100	60.220	ENSCGRG00000001027	Wdr3	100	59.434	Cricetulus_griseus_crigri
ENSHCOG00000017501	wdr3	98	83.683	ENSCSEG00000009381	wdr3	100	76.294	Cynoglossus_semilaevis
ENSHCOG00000017501	wdr3	98	79.930	ENSCVAG00000014846	wdr3	100	73.832	Cyprinodon_variegatus
ENSHCOG00000017501	wdr3	98	79.439	ENSDARG00000011079	wdr3	100	71.503	Danio_rerio
ENSHCOG00000017501	wdr3	97	68.501	ENSDNOG00000018114	WDR3	100	63.158	Dasypus_novemcinctus
ENSHCOG00000017501	wdr3	97	68.256	ENSDORG00000011031	Wdr3	100	62.887	Dipodomys_ordii
ENSHCOG00000017501	wdr3	98	43.894	FBgn0038597	CG8064	98	40.609	Drosophila_melanogaster
ENSHCOG00000017501	wdr3	97	68.113	ENSEASG00005006393	WDR3	100	62.629	Equus_asinus_asinus
ENSHCOG00000017501	wdr3	97	68.113	ENSECAG00000006575	WDR3	99	62.733	Equus_caballus
ENSHCOG00000017501	wdr3	97	68.706	ENSEEUG00000002218	WDR3	97	68.873	Erinaceus_europaeus
ENSHCOG00000017501	wdr3	98	78.231	ENSELUG00000005997	wdr3	99	72.021	Esox_lucius
ENSHCOG00000017501	wdr3	97	69.168	ENSFCAG00000003469	WDR3	99	63.599	Felis_catus
ENSHCOG00000017501	wdr3	97	66.588	ENSFALG00000005089	WDR3	99	62.008	Ficedula_albicollis
ENSHCOG00000017501	wdr3	98	68.866	ENSFDAG00000016284	WDR3	100	63.316	Fukomys_damarensis
ENSHCOG00000017501	wdr3	98	82.326	ENSFHEG00000012138	wdr3	100	73.271	Fundulus_heteroclitus
ENSHCOG00000017501	wdr3	98	72.642	ENSGMOG00000002962	wdr3	95	71.509	Gadus_morhua
ENSHCOG00000017501	wdr3	97	68.278	ENSGALG00000014791	WDR3	99	63.467	Gallus_gallus
ENSHCOG00000017501	wdr3	98	82.230	ENSGAFG00000013102	wdr3	100	76.033	Gambusia_affinis
ENSHCOG00000017501	wdr3	98	72.993	ENSGACG00000008251	wdr3	96	71.993	Gasterosteus_aculeatus
ENSHCOG00000017501	wdr3	97	69.104	ENSGAGG00000009171	WDR3	93	68.801	Gopherus_agassizii
ENSHCOG00000017501	wdr3	98	68.707	ENSGGOG00000009982	WDR3	100	63.938	Gorilla_gorilla
ENSHCOG00000017501	wdr3	98	84.517	ENSHBUG00000004367	wdr3	100	77.399	Haplochromis_burtoni
ENSHCOG00000017501	wdr3	98	68.519	ENSHGLG00000017936	WDR3	100	62.951	Heterocephalus_glaber_female
ENSHCOG00000017501	wdr3	98	68.519	ENSHGLG00100008292	WDR3	100	62.951	Heterocephalus_glaber_male
ENSHCOG00000017501	wdr3	98	77.544	ENSIPUG00000003396	wdr3	99	71.236	Ictalurus_punctatus
ENSHCOG00000017501	wdr3	97	68.779	ENSSTOG00000003504	WDR3	100	63.523	Ictidomys_tridecemlineatus
ENSHCOG00000017501	wdr3	97	67.916	ENSJJAG00000013861	Wdr3	100	62.526	Jaculus_jaculus
ENSHCOG00000017501	wdr3	98	82.791	ENSKMAG00000016004	wdr3	96	82.230	Kryptolebias_marmoratus
ENSHCOG00000017501	wdr3	98	79.953	ENSLBEG00000013757	wdr3	100	75.312	Labrus_bergylta
ENSHCOG00000017501	wdr3	98	63.103	ENSLACG00000014259	WDR3	100	59.142	Latimeria_chalumnae
ENSHCOG00000017501	wdr3	98	71.696	ENSLOCG00000011052	wdr3	100	65.979	Lepisosteus_oculatus
ENSHCOG00000017501	wdr3	97	68.224	ENSLAFG00000012108	WDR3	100	63.212	Loxodonta_africana
ENSHCOG00000017501	wdr3	98	68.482	ENSMFAG00000034570	WDR3	100	63.523	Macaca_fascicularis
ENSHCOG00000017501	wdr3	98	68.366	ENSMMUG00000008513	WDR3	100	63.420	Macaca_mulatta
ENSHCOG00000017501	wdr3	98	68.482	ENSMNEG00000039555	WDR3	100	63.523	Macaca_nemestrina
ENSHCOG00000017501	wdr3	98	68.366	ENSMLEG00000035516	WDR3	100	63.316	Mandrillus_leucophaeus
ENSHCOG00000017501	wdr3	98	79.250	ENSMAMG00000020737	wdr3	100	75.600	Mastacembelus_armatus
ENSHCOG00000017501	wdr3	98	79.045	ENSMZEG00005019253	wdr3	100	75.207	Maylandia_zebra
ENSHCOG00000017501	wdr3	96	67.147	ENSMGAG00000014241	WDR3	99	60.729	Meleagris_gallopavo
ENSHCOG00000017501	wdr3	97	68.075	ENSMAUG00000002574	Wdr3	100	62.215	Mesocricetus_auratus
ENSHCOG00000017501	wdr3	97	67.920	ENSMICG00000001783	WDR3	100	62.967	Microcebus_murinus
ENSHCOG00000017501	wdr3	97	68.508	ENSMOCG00000014361	Wdr3	100	62.733	Microtus_ochrogaster
ENSHCOG00000017501	wdr3	98	77.299	ENSMMOG00000019419	wdr3	100	73.049	Mola_mola
ENSHCOG00000017501	wdr3	97	67.840	ENSMODG00000005243	WDR3	100	63.043	Monodelphis_domestica
ENSHCOG00000017501	wdr3	98	74.182	ENSMALG00000016265	wdr3	99	70.803	Monopterus_albus
ENSHCOG00000017501	wdr3	97	68.192	MGP_CAROLIEiJ_G0025421	Wdr3	99	62.721	Mus_caroli
ENSHCOG00000017501	wdr3	97	68.192	ENSMUSG00000033285	Wdr3	99	62.825	Mus_musculus
ENSHCOG00000017501	wdr3	97	67.840	MGP_PahariEiJ_G0026865	Wdr3	100	63.174	Mus_pahari
ENSHCOG00000017501	wdr3	97	67.840	MGP_SPRETEiJ_G0026371	Wdr3	99	62.513	Mus_spretus
ENSHCOG00000017501	wdr3	97	68.384	ENSMPUG00000001565	WDR3	99	63.448	Mustela_putorius_furo
ENSHCOG00000017501	wdr3	97	68.545	ENSMLUG00000003500	WDR3	100	62.487	Myotis_lucifugus
ENSHCOG00000017501	wdr3	97	68.625	ENSNGAG00000021117	Wdr3	100	62.759	Nannospalax_galili
ENSHCOG00000017501	wdr3	98	74.533	ENSNBRG00000015140	wdr3	100	70.881	Neolamprologus_brichardi
ENSHCOG00000017501	wdr3	98	68.360	ENSNLEG00000005304	WDR3	100	63.834	Nomascus_leucogenys
ENSHCOG00000017501	wdr3	91	77.586	ENSMEUG00000009673	WDR3	72	77.586	Notamacropus_eugenii
ENSHCOG00000017501	wdr3	89	69.602	ENSOPRG00000001857	WDR3	93	64.000	Ochotona_princeps
ENSHCOG00000017501	wdr3	98	68.555	ENSODEG00000000136	WDR3	99	68.445	Octodon_degus
ENSHCOG00000017501	wdr3	98	83.935	ENSONIG00000015678	wdr3	100	77.399	Oreochromis_niloticus
ENSHCOG00000017501	wdr3	97	68.316	ENSOANG00000003070	WDR3	99	62.526	Ornithorhynchus_anatinus
ENSHCOG00000017501	wdr3	97	68.421	ENSOCUG00000007572	WDR3	100	63.731	Oryctolagus_cuniculus
ENSHCOG00000017501	wdr3	98	82.051	ENSORLG00020022391	wdr3	100	75.676	Oryzias_latipes_hni
ENSHCOG00000017501	wdr3	98	82.168	ENSORLG00015023208	wdr3	100	75.780	Oryzias_latipes_hsok
ENSHCOG00000017501	wdr3	98	82.654	ENSOMEG00000017592	wdr3	100	76.611	Oryzias_melastigma
ENSHCOG00000017501	wdr3	97	68.662	ENSOGAG00000007399	WDR3	100	63.627	Otolemur_garnettii
ENSHCOG00000017501	wdr3	97	68.501	ENSOARG00000020325	WDR3	100	63.636	Ovis_aries
ENSHCOG00000017501	wdr3	98	68.707	ENSPPAG00000029068	WDR3	100	63.938	Pan_paniscus
ENSHCOG00000017501	wdr3	97	68.816	ENSPPRG00000022972	WDR3	99	63.289	Panthera_pardus
ENSHCOG00000017501	wdr3	97	68.816	ENSPTIG00000016747	WDR3	99	63.392	Panthera_tigris_altaica
ENSHCOG00000017501	wdr3	98	68.707	ENSPTRG00000001168	WDR3	100	63.938	Pan_troglodytes
ENSHCOG00000017501	wdr3	98	68.476	ENSPANG00000020680	WDR3	100	63.420	Papio_anubis
ENSHCOG00000017501	wdr3	98	78.037	ENSPKIG00000024900	wdr3	100	71.237	Paramormyrops_kingsleyae
ENSHCOG00000017501	wdr3	97	69.140	ENSPSIG00000017455	WDR3	99	63.617	Pelodiscus_sinensis
ENSHCOG00000017501	wdr3	98	79.649	ENSPMGG00000022686	wdr3	99	72.689	Periophthalmus_magnuspinnatus
ENSHCOG00000017501	wdr3	97	68.155	ENSPEMG00000011928	Wdr3	100	61.905	Peromyscus_maniculatus_bairdii
ENSHCOG00000017501	wdr3	97	68.235	ENSPCIG00000000938	WDR3	96	68.293	Phascolarctos_cinereus
ENSHCOG00000017501	wdr3	98	82.831	ENSPFOG00000017900	wdr3	100	76.471	Poecilia_formosa
ENSHCOG00000017501	wdr3	98	82.811	ENSPLAG00000014362	wdr3	100	76.446	Poecilia_latipinna
ENSHCOG00000017501	wdr3	98	68.555	ENSPPYG00000000970	WDR3	100	63.814	Pongo_abelii
ENSHCOG00000017501	wdr3	90	54.088	ENSPCAG00000001265	WDR3	99	50.903	Procavia_capensis
ENSHCOG00000017501	wdr3	98	77.830	ENSPNYG00000006217	wdr3	100	73.526	Pundamilia_nyererei
ENSHCOG00000017501	wdr3	98	78.037	ENSPNAG00000006843	wdr3	100	71.042	Pygocentrus_nattereri
ENSHCOG00000017501	wdr3	97	67.136	ENSRNOG00000019670	Wdr3	100	61.570	Rattus_norvegicus
ENSHCOG00000017501	wdr3	98	68.519	ENSRBIG00000039149	WDR3	98	62.986	Rhinopithecus_bieti
ENSHCOG00000017501	wdr3	98	68.476	ENSRROG00000028066	WDR3	96	68.366	Rhinopithecus_roxellana
ENSHCOG00000017501	wdr3	98	37.099	YLR129W	DIP2	98	35.258	Saccharomyces_cerevisiae
ENSHCOG00000017501	wdr3	98	68.866	ENSSBOG00000015569	WDR3	100	63.420	Saimiri_boliviensis_boliviensis
ENSHCOG00000017501	wdr3	97	67.368	ENSSHAG00000005169	WDR3	100	62.231	Sarcophilus_harrisii
ENSHCOG00000017501	wdr3	98	76.429	ENSSFOG00015000595	wdr3	100	69.804	Scleropages_formosus
ENSHCOG00000017501	wdr3	98	82.462	ENSSMAG00000008334	wdr3	100	76.029	Scophthalmus_maximus
ENSHCOG00000017501	wdr3	98	83.586	ENSSDUG00000014276	wdr3	100	77.443	Seriola_dumerili
ENSHCOG00000017501	wdr3	98	81.893	ENSSLDG00000012837	wdr3	100	75.338	Seriola_lalandi_dorsalis
ENSHCOG00000017501	wdr3	84	75.000	ENSSARG00000002347	WDR3	86	75.000	Sorex_araneus
ENSHCOG00000017501	wdr3	97	63.002	ENSSPUG00000005582	WDR3	99	60.230	Sphenodon_punctatus
ENSHCOG00000017501	wdr3	97	68.545	ENSSSCG00000006727	WDR3	99	62.617	Sus_scrofa
ENSHCOG00000017501	wdr3	97	67.217	ENSTGUG00000013357	WDR3	99	62.474	Taeniopygia_guttata
ENSHCOG00000017501	wdr3	98	80.952	ENSTRUG00000002727	wdr3	100	74.101	Takifugu_rubripes
ENSHCOG00000017501	wdr3	98	79.128	ENSTNIG00000005299	wdr3	98	75.185	Tetraodon_nigroviridis
ENSHCOG00000017501	wdr3	79	73.438	ENSTBEG00000002549	WDR3	66	73.438	Tupaia_belangeri
ENSHCOG00000017501	wdr3	97	60.563	ENSTTRG00000003817	WDR3	100	56.477	Tursiops_truncatus
ENSHCOG00000017501	wdr3	97	65.141	ENSUAMG00000023139	WDR3	99	60.856	Ursus_americanus
ENSHCOG00000017501	wdr3	86	69.200	ENSVPAG00000000073	WDR3	89	64.620	Vicugna_pacos
ENSHCOG00000017501	wdr3	97	68.421	ENSVVUG00000010629	WDR3	99	63.392	Vulpes_vulpes
ENSHCOG00000017501	wdr3	98	68.293	ENSXETG00000009920	wdr3	99	62.913	Xenopus_tropicalis
ENSHCOG00000017501	wdr3	98	82.927	ENSXMAG00000009827	wdr3	100	76.653	Xiphophorus_maculatus