EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000017518 (Gene tree)
Gene ID: 109519303
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 24034 bases
Position: chrKV880069.1:221763-245796
Accession: 109519303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000014219	zf-C2H2_jaz	PF12171.8	4.5e-06	1	1
ENSHCOP00000014219	G-patch	PF01585.23	7.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000021763	-	6851	XM_019875731	ENSHCOP00000014219	1470 (aa)	XP_019731290	UPI00094EC9B9

Gene Model

Click here to download ENSHCOG00000017518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017518	gpatch8	100	74.734	ENSAPOG00000023938	gpatch8	100	75.332	Acanthochromis_polyacanthus
ENSHCOG00000017518	gpatch8	100	73.258	ENSACIG00000012241	gpatch8	100	74.320	Amphilophus_citrinellus
ENSHCOG00000017518	gpatch8	100	74.651	ENSAOCG00000018102	gpatch8	100	75.116	Amphiprion_ocellaris
ENSHCOG00000017518	gpatch8	100	74.584	ENSAPEG00000016776	gpatch8	100	75.050	Amphiprion_percula
ENSHCOG00000017518	gpatch8	56	70.616	ENSATEG00000003247	gpatch8	100	73.604	Anabas_testudineus
ENSHCOG00000017518	gpatch8	100	72.770	ENSACLG00000004165	gpatch8	100	72.836	Astatotilapia_calliptera
ENSHCOG00000017518	gpatch8	56	65.459	ENSCSEG00000021277	gpatch8	100	71.552	Cynoglossus_semilaevis
ENSHCOG00000017518	gpatch8	95	70.868	ENSCVAG00000013477	gpatch8	100	72.921	Cyprinodon_variegatus
ENSHCOG00000017518	gpatch8	53	46.018	ENSEBUG00000005749	gpatch8	54	44.156	Eptatretus_burgeri
ENSHCOG00000017518	gpatch8	61	58.910	ENSELUG00000019920	gpatch8	62	60.441	Esox_lucius
ENSHCOG00000017518	gpatch8	57	57.509	ENSFALG00000009554	GPATCH8	55	56.729	Ficedula_albicollis
ENSHCOG00000017518	gpatch8	56	66.507	ENSFHEG00000005791	gpatch8	100	71.400	Fundulus_heteroclitus
ENSHCOG00000017518	gpatch8	56	68.561	ENSGAFG00000018138	gpatch8	100	72.515	Gambusia_affinis
ENSHCOG00000017518	gpatch8	100	72.595	ENSHBUG00000002669	gpatch8	100	72.957	Haplochromis_burtoni
ENSHCOG00000017518	gpatch8	74	55.877	ENSHGLG00100010738	GPATCH8	62	63.025	Heterocephalus_glaber_male
ENSHCOG00000017518	gpatch8	59	58.242	ENSIPUG00000015431	gpatch8	100	58.964	Ictalurus_punctatus
ENSHCOG00000017518	gpatch8	56	66.269	ENSKMAG00000018364	gpatch8	61	68.988	Kryptolebias_marmoratus
ENSHCOG00000017518	gpatch8	100	72.757	ENSLBEG00000023352	gpatch8	100	73.488	Labrus_bergylta
ENSHCOG00000017518	gpatch8	63	73.723	ENSLOCG00000012265	gpatch8	72	76.642	Lepisosteus_oculatus
ENSHCOG00000017518	gpatch8	100	72.508	ENSMAMG00000001618	gpatch8	100	73.043	Mastacembelus_armatus
ENSHCOG00000017518	gpatch8	100	72.836	ENSMZEG00005022584	gpatch8	100	72.903	Maylandia_zebra
ENSHCOG00000017518	gpatch8	56	70.428	ENSMMOG00000020472	gpatch8	61	71.336	Mola_mola
ENSHCOG00000017518	gpatch8	100	72.618	ENSMALG00000004204	gpatch8	61	70.724	Monopterus_albus
ENSHCOG00000017518	gpatch8	54	65.089	ENSMLUG00000013840	GPATCH8	56	67.273	Myotis_lucifugus
ENSHCOG00000017518	gpatch8	100	72.908	ENSNBRG00000016402	gpatch8	100	73.174	Neolamprologus_brichardi
ENSHCOG00000017518	gpatch8	100	69.893	ENSONIG00000001292	gpatch8	100	70.728	Oreochromis_niloticus
ENSHCOG00000017518	gpatch8	56	69.002	ENSORLG00000028497	gpatch8	61	70.065	Oryzias_latipes
ENSHCOG00000017518	gpatch8	61	69.197	ENSORLG00020006656	gpatch8	61	70.033	Oryzias_latipes_hni
ENSHCOG00000017518	gpatch8	56	69.002	ENSORLG00015019797	gpatch8	61	69.631	Oryzias_latipes_hsok
ENSHCOG00000017518	gpatch8	56	69.212	ENSOMEG00000023809	gpatch8	61	69.390	Oryzias_melastigma
ENSHCOG00000017518	gpatch8	61	51.952	ENSPKIG00000018753	gpatch8	56	52.118	Paramormyrops_kingsleyae
ENSHCOG00000017518	gpatch8	100	67.449	ENSPMGG00000000730	gpatch8	99	70.199	Periophthalmus_magnuspinnatus
ENSHCOG00000017518	gpatch8	56	68.357	ENSPFOG00000014833	gpatch8	100	72.600	Poecilia_formosa
ENSHCOG00000017518	gpatch8	56	67.995	ENSPLAG00000001035	gpatch8	100	72.333	Poecilia_latipinna
ENSHCOG00000017518	gpatch8	96	70.842	ENSPMEG00000024032	gpatch8	100	72.600	Poecilia_mexicana
ENSHCOG00000017518	gpatch8	96	70.515	ENSPREG00000008911	gpatch8	100	72.267	Poecilia_reticulata
ENSHCOG00000017518	gpatch8	100	72.806	ENSPNYG00000009426	gpatch8	100	72.969	Pundamilia_nyererei
ENSHCOG00000017518	gpatch8	57	55.006	ENSPNAG00000016200	gpatch8	64	57.834	Pygocentrus_nattereri
ENSHCOG00000017518	gpatch8	56	54.481	ENSSFOG00015004299	GPATCH8	55	53.191	Scleropages_formosus
ENSHCOG00000017518	gpatch8	96	72.940	ENSSDUG00000018065	gpatch8	100	73.558	Seriola_dumerili
ENSHCOG00000017518	gpatch8	100	74.305	ENSSLDG00000009225	gpatch8	100	74.901	Seriola_lalandi_dorsalis
ENSHCOG00000017518	gpatch8	100	74.385	ENSSPAG00000011368	gpatch8	100	75.183	Stegastes_partitus
ENSHCOG00000017518	gpatch8	56	66.348	ENSTRUG00000020474	gpatch8	100	70.213	Takifugu_rubripes
ENSHCOG00000017518	gpatch8	57	63.197	ENSTBEG00000009486	GPATCH8	55	64.074	Tupaia_belangeri
ENSHCOG00000017518	gpatch8	100	71.923	ENSXCOG00000016680	gpatch8	100	72.588	Xiphophorus_couchianus
ENSHCOG00000017518	gpatch8	96	71.022	ENSXMAG00000009217	gpatch8	100	72.788	Xiphophorus_maculatus