EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000017576 (Gene tree)
Gene ID: 109519325
Gene Symbol: -
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like protein 5B
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2300 bases
Position: chrKV880069.1:200929-203228
Accession: 109519325
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000014265	MMR_HSR1	PF01926.23	7.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000021821	-	1389	XM_019875775	ENSHCOP00000014265	179 (aa)	XP_019731334	UPI00094EAECE

Gene Model

Click here to download ENSHCOG00000017576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017576's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000017576	-	93	43.373	ENSHCOG00000015577	-	93	43.373
ENSHCOG00000017576	-	98	45.763	ENSHCOG00000018128	ARF1	98	45.763
ENSHCOG00000017576	-	98	44.886	ENSHCOG00000020217	-	98	44.886
ENSHCOG00000017576	-	89	37.349	ENSHCOG00000008233	arl4cb	83	37.349
ENSHCOG00000017576	-	98	37.705	ENSHCOG00000014829	-	88	39.205
ENSHCOG00000017576	-	89	36.527	ENSHCOG00000008536	-	83	36.527
ENSHCOG00000017576	-	98	67.045	ENSHCOG00000016616	ARL5A	98	67.045
ENSHCOG00000017576	-	83	34.899	ENSHCOG00000005512	-	78	34.899
ENSHCOG00000017576	-	83	31.333	ENSHCOG00000010468	arl8bb	78	31.333
ENSHCOG00000017576	-	89	35.928	ENSHCOG00000011881	arl4d	82	35.928
ENSHCOG00000017576	-	96	46.784	ENSHCOG00000005566	arl1	94	46.784
ENSHCOG00000017576	-	92	71.341	ENSHCOG00000015779	arl8	92	73.125
ENSHCOG00000017576	-	97	45.665	ENSHCOG00000003257	-	96	45.665
ENSHCOG00000017576	-	92	37.870	ENSHCOG00000019844	-	87	37.870
ENSHCOG00000017576	-	93	38.690	ENSHCOG00000002573	arl11	94	38.690
ENSHCOG00000017576	-	100	38.503	ENSHCOG00000003724	ARL6	95	38.503
ENSHCOG00000017576	-	93	35.593	ENSHCOG00000005225	arfrp1	87	35.593
ENSHCOG00000017576	-	92	36.932	ENSHCOG00000009949	arl2	90	36.932
ENSHCOG00000017576	-	86	40.625	ENSHCOG00000006452	arl4aa	83	40.625
ENSHCOG00000017576	-	83	30.667	ENSHCOG00000000920	arl8ba	78	30.667
ENSHCOG00000017576	-	86	44.025	ENSHCOG00000009562	arl14	75	44.025
ENSHCOG00000017576	-	97	45.665	ENSHCOG00000003460	arf3a	96	45.665
ENSHCOG00000017576	-	91	38.037	ENSHCOG00000015600	arl3	90	38.037
ENSHCOG00000017576	-	97	35.227	ENSHCOG00000016255	arl3l2	96	35.227

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017576	-	100	81.564	ENSAPOG00000005821	arl5c	100	81.564	Acanthochromis_polyacanthus
ENSHCOG00000017576	-	99	79.096	ENSACIG00000008975	arl5c	98	79.096	Amphilophus_citrinellus
ENSHCOG00000017576	-	100	82.682	ENSAOCG00000010448	arl5c	100	82.682	Amphiprion_ocellaris
ENSHCOG00000017576	-	100	82.682	ENSAPEG00000002699	arl5c	100	82.682	Amphiprion_percula
ENSHCOG00000017576	-	100	81.564	ENSATEG00000000181	arl5c	100	81.564	Anabas_testudineus
ENSHCOG00000017576	-	100	82.682	ENSACLG00000000922	arl5c	100	83.537	Astatotilapia_calliptera
ENSHCOG00000017576	-	100	77.095	ENSAMXG00000031771	arl5c	100	77.095	Astyanax_mexicanus
ENSHCOG00000017576	-	100	78.212	ENSCSEG00000009845	arl5c	100	78.212	Cynoglossus_semilaevis
ENSHCOG00000017576	-	99	84.831	ENSCVAG00000012706	arl5c	99	84.831	Cyprinodon_variegatus
ENSHCOG00000017576	-	100	75.419	ENSDARG00000035719	arl5c	100	75.419	Danio_rerio
ENSHCOG00000017576	-	100	80.447	ENSELUG00000016864	arl5c	100	80.447	Esox_lucius
ENSHCOG00000017576	-	99	85.311	ENSFHEG00000013677	arl5c	99	85.311	Fundulus_heteroclitus
ENSHCOG00000017576	-	99	84.831	ENSGAFG00000002547	arl5c	99	84.831	Gambusia_affinis
ENSHCOG00000017576	-	99	84.270	ENSGACG00000009321	arl5c	99	84.270	Gasterosteus_aculeatus
ENSHCOG00000017576	-	100	82.682	ENSHBUG00000007301	arl5c	100	82.682	Haplochromis_burtoni
ENSHCOG00000017576	-	100	76.536	ENSIPUG00000023232	arl5c	100	76.536	Ictalurus_punctatus
ENSHCOG00000017576	-	100	83.799	ENSKMAG00000011323	arl5c	100	83.799	Kryptolebias_marmoratus
ENSHCOG00000017576	-	100	82.682	ENSLBEG00000006177	arl5c	86	82.682	Labrus_bergylta
ENSHCOG00000017576	-	100	83.240	ENSMAMG00000022157	arl5c	100	83.240	Mastacembelus_armatus
ENSHCOG00000017576	-	100	82.682	ENSMZEG00005022925	arl5c	100	82.682	Maylandia_zebra
ENSHCOG00000017576	-	92	85.366	ENSMMOG00000020851	arl5c	96	85.366	Mola_mola
ENSHCOG00000017576	-	92	83.537	ENSMALG00000009306	arl5c	93	83.537	Monopterus_albus
ENSHCOG00000017576	-	100	83.240	ENSNBRG00000020245	arl5c	100	84.146	Neolamprologus_brichardi
ENSHCOG00000017576	-	100	83.240	ENSONIG00000000890	arl5c	99	83.240	Oreochromis_niloticus
ENSHCOG00000017576	-	100	79.888	ENSORLG00000002960	arl5c	100	81.098	Oryzias_latipes
ENSHCOG00000017576	-	100	79.888	ENSORLG00020010074	arl5c	100	81.098	Oryzias_latipes_hni
ENSHCOG00000017576	-	100	79.888	ENSORLG00015002752	arl5c	100	81.098	Oryzias_latipes_hsok
ENSHCOG00000017576	-	97	79.191	ENSOMEG00000021718	arl5c	98	79.191	Oryzias_melastigma
ENSHCOG00000017576	-	100	78.212	ENSPKIG00000021727	arl5c	100	78.212	Paramormyrops_kingsleyae
ENSHCOG00000017576	-	100	84.358	ENSPFOG00000007842	arl5c	99	84.358	Poecilia_formosa
ENSHCOG00000017576	-	100	83.799	ENSPLAG00000002394	arl5c	100	83.799	Poecilia_latipinna
ENSHCOG00000017576	-	91	86.503	ENSPMEG00000000631	arl5c	94	86.503	Poecilia_mexicana
ENSHCOG00000017576	-	100	84.916	ENSPREG00000008730	arl5c	100	84.916	Poecilia_reticulata
ENSHCOG00000017576	-	100	82.682	ENSPNYG00000012720	arl5c	100	83.537	Pundamilia_nyererei
ENSHCOG00000017576	-	100	75.419	ENSPNAG00000002310	arl5c	100	75.419	Pygocentrus_nattereri
ENSHCOG00000017576	-	100	76.536	ENSSFOG00015023529	arl5c	100	76.536	Scleropages_formosus
ENSHCOG00000017576	-	100	84.916	ENSSMAG00000010552	arl5c	100	84.916	Scophthalmus_maximus
ENSHCOG00000017576	-	100	81.564	ENSSDUG00000022640	arl5c	100	81.564	Seriola_dumerili
ENSHCOG00000017576	-	100	81.564	ENSSLDG00000000728	arl5c	100	81.564	Seriola_lalandi_dorsalis
ENSHCOG00000017576	-	100	82.682	ENSSPAG00000007687	arl5c	100	82.682	Stegastes_partitus
ENSHCOG00000017576	-	100	84.916	ENSTRUG00000022814	arl5c	100	84.916	Takifugu_rubripes
ENSHCOG00000017576	-	100	84.916	ENSTNIG00000003015	arl5c	99	84.916	Tetraodon_nigroviridis
ENSHCOG00000017576	-	99	84.270	ENSXCOG00000017380	arl5c	99	84.270	Xiphophorus_couchianus
ENSHCOG00000017576	-	99	83.708	ENSXMAG00000008447	arl5c	99	83.708	Xiphophorus_maculatus