EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000017587 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ataxin-2-like protein
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 6189 bases
Position: chrKV879664.1:339650-345838
Accession: 109524589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000014252	PAM2	PF07145.15	1.4e-05	1	1
ENSHCOP00000014252	LsmAD	PF06741.13	3.9e-14	1	1
ENSHCOP00000014252	SM-ATX	PF14438.6	5.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000021829	-	2427	XM_019884611	ENSHCOP00000014252	809 (aa)	XP_019740170	-

Gene Model

Click here to download ENSHCOG00000017587's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017587's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017587	-	67	64.479	ENSG00000168488	ATXN2L	100	65.591	Homo_sapiens
ENSHCOG00000017587	-	61	84.302	ENSAPOG00000021412	-	82	89.846	Acanthochromis_polyacanthus
ENSHCOG00000017587	-	79	67.557	ENSACIG00000024435	atxn2l	93	48.156	Amphilophus_citrinellus
ENSHCOG00000017587	-	96	76.256	ENSACIG00000014731	-	93	75.686	Amphilophus_citrinellus
ENSHCOG00000017587	-	91	89.231	ENSAOCG00000002581	-	83	89.231	Amphiprion_ocellaris
ENSHCOG00000017587	-	100	89.538	ENSAPEG00000011038	-	82	89.538	Amphiprion_percula
ENSHCOG00000017587	-	61	83.658	ENSATEG00000019382	-	80	86.018	Anabas_testudineus
ENSHCOG00000017587	-	100	86.667	ENSACLG00000009975	-	80	85.758	Astatotilapia_calliptera
ENSHCOG00000017587	-	67	64.479	ENSCCAG00000033928	ATXN2L	50	63.095	Cebus_capucinus
ENSHCOG00000017587	-	67	64.865	ENSCATG00000021354	ATXN2L	52	63.492	Cercocebus_atys
ENSHCOG00000017587	-	61	82.879	ENSCVAG00000015825	-	82	82.879	Cyprinodon_variegatus
ENSHCOG00000017587	-	97	45.349	ENSEASG00005014992	ATXN2L	68	64.122	Equus_asinus_asinus
ENSHCOG00000017587	-	93	70.144	ENSELUG00000022915	-	84	68.511	Esox_lucius
ENSHCOG00000017587	-	61	65.254	ENSGMOG00000000316	atxn2l	61	66.102	Gadus_morhua
ENSHCOG00000017587	-	61	78.988	ENSGAFG00000019364	-	82	84.536	Gambusia_affinis
ENSHCOG00000017587	-	99	42.461	ENSGAGG00000006078	ATXN2L	50	63.740	Gopherus_agassizii
ENSHCOG00000017587	-	100	86.364	ENSHBUG00000007997	-	82	85.455	Haplochromis_burtoni
ENSHCOG00000017587	-	100	86.280	ENSKMAG00000021450	-	83	86.280	Kryptolebias_marmoratus
ENSHCOG00000017587	-	92	52.997	ENSLBEG00000006525	atxn2l	81	55.205	Labrus_bergylta
ENSHCOG00000017587	-	99	85.583	ENSLBEG00000022720	-	80	85.583	Labrus_bergylta
ENSHCOG00000017587	-	100	85.538	ENSMAMG00000013005	-	80	85.538	Mastacembelus_armatus
ENSHCOG00000017587	-	100	86.667	ENSMZEG00005013869	-	80	85.758	Maylandia_zebra
ENSHCOG00000017587	-	61	45.261	ENSMOCG00000020882	Atxn2l	51	43.539	Microtus_ochrogaster
ENSHCOG00000017587	-	99	74.249	ENSMMOG00000001440	-	92	75.751	Mola_mola
ENSHCOG00000017587	-	99	77.928	ENSMALG00000008430	-	89	78.298	Monopterus_albus
ENSHCOG00000017587	-	67	64.479	MGP_CAROLIEiJ_G0030450	Atxn2l	76	68.263	Mus_caroli
ENSHCOG00000017587	-	99	41.477	ENSMUSG00000032637	Atxn2l	76	68.263	Mus_musculus
ENSHCOG00000017587	-	97	44.814	MGP_SPRETEiJ_G0031564	Atxn2l	76	68.263	Mus_spretus
ENSHCOG00000017587	-	100	85.389	ENSNBRG00000012039	-	91	85.389	Neolamprologus_brichardi
ENSHCOG00000017587	-	100	86.970	ENSONIG00000011478	-	82	86.061	Oreochromis_niloticus
ENSHCOG00000017587	-	66	63.855	ENSOCUG00000002677	ATXN2L	59	63.492	Oryctolagus_cuniculus
ENSHCOG00000017587	-	100	81.346	ENSORLG00000006059	-	80	81.346	Oryzias_latipes
ENSHCOG00000017587	-	100	80.734	ENSORLG00020000991	-	80	80.734	Oryzias_latipes_hni
ENSHCOG00000017587	-	100	81.957	ENSORLG00015014174	-	80	81.957	Oryzias_latipes_hsok
ENSHCOG00000017587	-	100	81.402	ENSOMEG00000021118	-	92	71.864	Oryzias_melastigma
ENSHCOG00000017587	-	66	63.855	ENSPPAG00000039107	ATXN2L	51	63.492	Pan_paniscus
ENSHCOG00000017587	-	100	70.213	ENSPKIG00000018462	-	83	70.031	Paramormyrops_kingsleyae
ENSHCOG00000017587	-	71	63.359	ENSPSIG00000004866	ATXN2L	56	63.359	Pelodiscus_sinensis
ENSHCOG00000017587	-	79	79.697	ENSPMGG00000014821	-	86	79.649	Periophthalmus_magnuspinnatus
ENSHCOG00000017587	-	100	80.000	ENSPFOG00000005935	-	81	80.000	Poecilia_formosa
ENSHCOG00000017587	-	100	78.988	ENSPLAG00000017094	-	83	81.231	Poecilia_latipinna
ENSHCOG00000017587	-	61	79.572	ENSPMEG00000017227	-	83	79.692	Poecilia_mexicana
ENSHCOG00000017587	-	61	80.156	ENSPREG00000023090	-	81	81.846	Poecilia_reticulata
ENSHCOG00000017587	-	100	86.667	ENSPNYG00000017058	-	80	85.758	Pundamilia_nyererei
ENSHCOG00000017587	-	87	64.964	ENSPNYG00000012482	atxn2l	87	50.659	Pundamilia_nyererei
ENSHCOG00000017587	-	63	66.228	ENSRBIG00000036712	ATXN2L	56	66.228	Rhinopithecus_bieti
ENSHCOG00000017587	-	67	64.479	ENSSBOG00000025782	ATXN2L	60	63.095	Saimiri_boliviensis_boliviensis
ENSHCOG00000017587	-	66	63.707	ENSSHAG00000012015	ATXN2L	52	63.707	Sarcophilus_harrisii
ENSHCOG00000017587	-	99	60.578	ENSSFOG00015021588	-	93	60.231	Scleropages_formosus
ENSHCOG00000017587	-	61	59.393	ENSSFOG00015001018	atxn2l	50	58.588	Scleropages_formosus
ENSHCOG00000017587	-	100	87.616	ENSSMAG00000016932	-	80	87.616	Scophthalmus_maximus
ENSHCOG00000017587	-	100	89.264	ENSSDUG00000023014	-	81	89.264	Seriola_dumerili
ENSHCOG00000017587	-	100	86.280	ENSSPAG00000008174	-	80	86.280	Stegastes_partitus
ENSHCOG00000017587	-	100	88.854	ENSTRUG00000007132	-	80	88.854	Takifugu_rubripes
ENSHCOG00000017587	-	72	56.380	ENSUMAG00000009437	ATXN2L	68	64.122	Ursus_maritimus
ENSHCOG00000017587	-	96	45.660	ENSVVUG00000024239	ATXN2L	53	64.122	Vulpes_vulpes
ENSHCOG00000017587	-	99	67.362	ENSXCOG00000001128	-	92	68.266	Xiphophorus_couchianus
ENSHCOG00000017587	-	61	78.530	ENSXMAG00000010133	-	81	80.000	Xiphophorus_maculatus