EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000017590 (Gene tree)
Gene ID: 109528884
Gene Symbol: ddx28
Alias: zgc:153386
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 1990 bases
Position: chrKV879777.1:1410196-1412185
Accession: 109528884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000014270	DEAD	PF00270.29	2.4e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000021871	-	1671	XM_019891935	ENSHCOP00000014270	556 (aa)	XP_019747494	UPI00094EEB66

Gene Model

Click here to download ENSHCOG00000017590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017590's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000017590	ddx28	69	30.670	ENSHCOG00000006456	-	57	30.542
ENSHCOG00000017590	ddx28	70	31.807	ENSHCOG00000020998	ddx31	62	31.807
ENSHCOG00000017590	ddx28	72	30.370	ENSHCOG00000014704	ddx43	58	30.370
ENSHCOG00000017590	ddx28	57	32.500	ENSHCOG00000016131	ddx51	50	32.500
ENSHCOG00000017590	ddx28	76	30.588	ENSHCOG00000005496	ddx47	81	30.445
ENSHCOG00000017590	ddx28	69	30.077	ENSHCOG00000019168	DDX5	55	30.319
ENSHCOG00000017590	ddx28	65	31.325	ENSHCOG00000011492	ddx1	53	31.325

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017590	ddx28	92	46.628	ENSG00000182810	DDX28	94	46.628	Homo_sapiens
ENSHCOG00000017590	ddx28	98	71.735	ENSAPOG00000000991	ddx28	97	71.735	Acanthochromis_polyacanthus
ENSHCOG00000017590	ddx28	92	45.614	ENSAMEG00000019426	DDX28	94	45.614	Ailuropoda_melanoleuca
ENSHCOG00000017590	ddx28	99	71.480	ENSACIG00000021615	ddx28	98	71.480	Amphilophus_citrinellus
ENSHCOG00000017590	ddx28	98	71.250	ENSAOCG00000004610	ddx28	97	71.250	Amphiprion_ocellaris
ENSHCOG00000017590	ddx28	98	70.714	ENSAPEG00000002143	ddx28	97	70.714	Amphiprion_percula
ENSHCOG00000017590	ddx28	99	69.312	ENSATEG00000018691	ddx28	100	69.312	Anabas_testudineus
ENSHCOG00000017590	ddx28	93	45.833	ENSACAG00000009755	DDX28	96	45.833	Anolis_carolinensis
ENSHCOG00000017590	ddx28	99	67.089	ENSACLG00000012984	ddx28	98	67.089	Astatotilapia_calliptera
ENSHCOG00000017590	ddx28	94	61.967	ENSAMXG00000005878	ddx28	93	61.967	Astyanax_mexicanus
ENSHCOG00000017590	ddx28	91	46.498	ENSBTAG00000004290	DDX28	93	46.498	Bos_taurus
ENSHCOG00000017590	ddx28	90	46.154	ENSCAFG00000020327	DDX28	94	46.154	Canis_familiaris
ENSHCOG00000017590	ddx28	90	46.154	ENSCAFG00020019785	DDX28	94	46.154	Canis_lupus_dingo
ENSHCOG00000017590	ddx28	91	46.199	ENSCHIG00000009658	DDX28	93	46.199	Capra_hircus
ENSHCOG00000017590	ddx28	92	48.170	ENSCPOG00000013746	DDX28	94	48.170	Cavia_porcellus
ENSHCOG00000017590	ddx28	92	46.923	ENSCSAG00000018472	DDX28	93	46.923	Chlorocebus_sabaeus
ENSHCOG00000017590	ddx28	81	50.661	ENSCPBG00000012105	DDX28	81	52.463	Chrysemys_picta_bellii
ENSHCOG00000017590	ddx28	65	35.215	ENSCSAVG00000006341	-	94	35.215	Ciona_savignyi
ENSHCOG00000017590	ddx28	89	45.509	ENSCGRG00001024412	Ddx28	94	45.833	Cricetulus_griseus_chok1gshd
ENSHCOG00000017590	ddx28	94	68.906	ENSCSEG00000011651	ddx28	91	68.906	Cynoglossus_semilaevis
ENSHCOG00000017590	ddx28	98	68.773	ENSCVAG00000004044	ddx28	99	68.773	Cyprinodon_variegatus
ENSHCOG00000017590	ddx28	98	60.252	ENSDARG00000060411	ddx28	98	60.252	Danio_rerio
ENSHCOG00000017590	ddx28	65	53.699	ENSDNOG00000033593	DDX28	99	53.699	Dasypus_novemcinctus
ENSHCOG00000017590	ddx28	92	45.665	ENSDORG00000028868	Ddx28	94	45.962	Dipodomys_ordii
ENSHCOG00000017590	ddx28	85	36.175	FBgn0086130	Dbp21E2	87	35.845	Drosophila_melanogaster
ENSHCOG00000017590	ddx28	92	47.389	ENSETEG00000001062	-	94	47.389	Echinops_telfairi
ENSHCOG00000017590	ddx28	88	33.943	ENSEBUG00000004791	ddx28	85	33.855	Eptatretus_burgeri
ENSHCOG00000017590	ddx28	92	46.318	ENSEASG00005020387	DDX28	94	46.318	Equus_asinus_asinus
ENSHCOG00000017590	ddx28	92	46.705	ENSECAG00000006451	DDX28	94	46.705	Equus_caballus
ENSHCOG00000017590	ddx28	73	40.964	ENSEEUG00000005017	DDX28	95	40.964	Erinaceus_europaeus
ENSHCOG00000017590	ddx28	90	65.815	ENSELUG00000005302	ddx28	98	65.058	Esox_lucius
ENSHCOG00000017590	ddx28	92	46.394	ENSFCAG00000012858	DDX28	94	46.394	Felis_catus
ENSHCOG00000017590	ddx28	99	67.329	ENSFHEG00000012573	ddx28	99	67.329	Fundulus_heteroclitus
ENSHCOG00000017590	ddx28	94	66.983	ENSGMOG00000017045	ddx28	99	66.983	Gadus_morhua
ENSHCOG00000017590	ddx28	91	44.952	ENSGALG00000048700	DDX28	90	44.821	Gallus_gallus
ENSHCOG00000017590	ddx28	97	69.908	ENSGAFG00000009249	ddx28	96	69.908	Gambusia_affinis
ENSHCOG00000017590	ddx28	93	73.501	ENSGACG00000016367	ddx28	95	73.501	Gasterosteus_aculeatus
ENSHCOG00000017590	ddx28	81	46.799	ENSGAGG00000004565	DDX28	98	46.799	Gopherus_agassizii
ENSHCOG00000017590	ddx28	92	46.821	ENSGGOG00000001220	DDX28	94	46.821	Gorilla_gorilla
ENSHCOG00000017590	ddx28	99	70.524	ENSHBUG00000001016	ddx28	98	70.524	Haplochromis_burtoni
ENSHCOG00000017590	ddx28	99	59.683	ENSIPUG00000017350	Ddx28	99	59.683	Ictalurus_punctatus
ENSHCOG00000017590	ddx28	92	46.923	ENSSTOG00000002064	DDX28	94	46.923	Ictidomys_tridecemlineatus
ENSHCOG00000017590	ddx28	92	46.935	ENSJJAG00000012460	-	94	47.126	Jaculus_jaculus
ENSHCOG00000017590	ddx28	98	66.667	ENSKMAG00000018183	ddx28	97	66.667	Kryptolebias_marmoratus
ENSHCOG00000017590	ddx28	99	71.099	ENSLBEG00000006072	ddx28	99	70.973	Labrus_bergylta
ENSHCOG00000017590	ddx28	91	56.016	ENSLACG00000005578	DDX28	87	56.016	Latimeria_chalumnae
ENSHCOG00000017590	ddx28	94	57.514	ENSLOCG00000017604	ddx28	96	57.514	Lepisosteus_oculatus
ENSHCOG00000017590	ddx28	92	47.195	ENSLAFG00000031239	DDX28	94	47.195	Loxodonta_africana
ENSHCOG00000017590	ddx28	92	46.923	ENSMMUG00000010836	DDX28	93	46.923	Macaca_mulatta
ENSHCOG00000017590	ddx28	97	70.932	ENSMAMG00000020220	ddx28	96	70.932	Mastacembelus_armatus
ENSHCOG00000017590	ddx28	99	70.705	ENSMZEG00005009292	ddx28	98	70.705	Maylandia_zebra
ENSHCOG00000017590	ddx28	92	38.911	ENSMICG00000012346	-	93	38.911	Microcebus_murinus
ENSHCOG00000017590	ddx28	92	46.718	ENSMOCG00000009815	Ddx28	94	46.718	Microtus_ochrogaster
ENSHCOG00000017590	ddx28	93	70.962	ENSMMOG00000000270	ddx28	93	70.962	Mola_mola
ENSHCOG00000017590	ddx28	93	47.710	ENSMODG00000005303	DDX28	94	47.710	Monodelphis_domestica
ENSHCOG00000017590	ddx28	97	70.290	ENSMALG00000008864	ddx28	97	70.290	Monopterus_albus
ENSHCOG00000017590	ddx28	93	47.025	MGP_CAROLIEiJ_G0031510	Ddx28	95	47.025	Mus_caroli
ENSHCOG00000017590	ddx28	93	45.873	ENSMUSG00000045538	Ddx28	95	45.873	Mus_musculus
ENSHCOG00000017590	ddx28	93	46.065	MGP_PahariEiJ_G0023110	Ddx28	95	46.065	Mus_pahari
ENSHCOG00000017590	ddx28	93	46.065	MGP_SPRETEiJ_G0032628	Ddx28	95	46.065	Mus_spretus
ENSHCOG00000017590	ddx28	66	49.593	ENSMPUG00000006915	DDX28	92	49.593	Mustela_putorius_furo
ENSHCOG00000017590	ddx28	92	45.155	ENSMLUG00000005899	DDX28	94	45.543	Myotis_lucifugus
ENSHCOG00000017590	ddx28	92	47.206	ENSNGAG00000015762	Ddx28	94	47.500	Nannospalax_galili
ENSHCOG00000017590	ddx28	97	71.560	ENSNBRG00000001337	ddx28	98	71.560	Neolamprologus_brichardi
ENSHCOG00000017590	ddx28	98	70.780	ENSONIG00000020597	ddx28	98	70.780	Oreochromis_niloticus
ENSHCOG00000017590	ddx28	50	52.708	ENSOANG00000003551	-	96	52.708	Ornithorhynchus_anatinus
ENSHCOG00000017590	ddx28	92	46.990	ENSOCUG00000023074	DDX28	94	47.206	Oryctolagus_cuniculus
ENSHCOG00000017590	ddx28	93	69.674	ENSORLG00000011968	ddx28	93	69.674	Oryzias_latipes
ENSHCOG00000017590	ddx28	98	68.124	ENSORLG00020001951	ddx28	99	68.124	Oryzias_latipes_hni
ENSHCOG00000017590	ddx28	98	68.124	ENSORLG00015023030	ddx28	99	68.124	Oryzias_latipes_hsok
ENSHCOG00000017590	ddx28	99	66.667	ENSOMEG00000012445	ddx28	100	66.667	Oryzias_melastigma
ENSHCOG00000017590	ddx28	92	47.195	ENSOGAG00000016895	DDX28	94	47.195	Otolemur_garnettii
ENSHCOG00000017590	ddx28	80	45.536	ENSOARG00000003313	DDX28	99	45.536	Ovis_aries
ENSHCOG00000017590	ddx28	92	43.931	ENSPPAG00000036971	DDX28	94	43.931	Pan_paniscus
ENSHCOG00000017590	ddx28	92	46.784	ENSPPRG00000018322	DDX28	94	46.784	Panthera_pardus
ENSHCOG00000017590	ddx28	92	45.224	ENSPTIG00000006444	DDX28	94	45.224	Panthera_tigris_altaica
ENSHCOG00000017590	ddx28	92	46.435	ENSPTRG00000008258	DDX28	94	46.435	Pan_troglodytes
ENSHCOG00000017590	ddx28	94	61.553	ENSPKIG00000021200	ddx28	96	61.553	Paramormyrops_kingsleyae
ENSHCOG00000017590	ddx28	51	57.840	ENSPSIG00000001127	DDX28	94	57.840	Pelodiscus_sinensis
ENSHCOG00000017590	ddx28	99	63.055	ENSPMGG00000007908	ddx28	98	63.055	Periophthalmus_magnuspinnatus
ENSHCOG00000017590	ddx28	92	45.174	ENSPEMG00000003395	Ddx28	94	45.560	Peromyscus_maniculatus_bairdii
ENSHCOG00000017590	ddx28	51	46.875	ENSPMAG00000006983	DDX28	95	46.875	Petromyzon_marinus
ENSHCOG00000017590	ddx28	99	67.901	ENSPFOG00000020952	ddx28	99	67.901	Poecilia_formosa
ENSHCOG00000017590	ddx28	99	68.021	ENSPFOG00000020838	DDX28	100	68.021	Poecilia_formosa
ENSHCOG00000017590	ddx28	99	67.725	ENSPLAG00000016292	ddx28	99	67.725	Poecilia_latipinna
ENSHCOG00000017590	ddx28	99	68.198	ENSPMEG00000011311	ddx28	98	68.198	Poecilia_mexicana
ENSHCOG00000017590	ddx28	99	67.019	ENSPREG00000002899	ddx28	99	67.019	Poecilia_reticulata
ENSHCOG00000017590	ddx28	92	46.435	ENSPPYG00000007481	DDX28	95	46.435	Pongo_abelii
ENSHCOG00000017590	ddx28	92	46.615	ENSPCOG00000024632	DDX28	94	46.718	Propithecus_coquereli
ENSHCOG00000017590	ddx28	99	70.524	ENSPNYG00000018804	ddx28	98	70.524	Pundamilia_nyererei
ENSHCOG00000017590	ddx28	93	60.837	ENSPNAG00000014597	ddx28	97	60.837	Pygocentrus_nattereri
ENSHCOG00000017590	ddx28	93	46.449	ENSRNOG00000019817	Ddx28	95	46.449	Rattus_norvegicus
ENSHCOG00000017590	ddx28	92	61.583	ENSSFOG00015010181	ddx28	99	58.929	Scleropages_formosus
ENSHCOG00000017590	ddx28	90	73.413	ENSSMAG00000006831	ddx28	94	73.413	Scophthalmus_maximus
ENSHCOG00000017590	ddx28	98	71.607	ENSSDUG00000003257	ddx28	98	71.607	Seriola_dumerili
ENSHCOG00000017590	ddx28	98	71.377	ENSSLDG00000004513	ddx28	98	71.377	Seriola_lalandi_dorsalis
ENSHCOG00000017590	ddx28	92	47.582	ENSSARG00000014169	DDX28	94	47.776	Sorex_araneus
ENSHCOG00000017590	ddx28	98	72.630	ENSSPAG00000000988	ddx28	99	72.630	Stegastes_partitus
ENSHCOG00000017590	ddx28	92	45.331	ENSSSCG00000026038	DDX28	94	45.525	Sus_scrofa
ENSHCOG00000017590	ddx28	98	65.405	ENSTRUG00000007815	ddx28	99	65.586	Takifugu_rubripes
ENSHCOG00000017590	ddx28	91	68.836	ENSTNIG00000011352	ddx28	99	68.836	Tetraodon_nigroviridis
ENSHCOG00000017590	ddx28	74	59.624	ENSTBEG00000017695	DDX28	76	59.624	Tupaia_belangeri
ENSHCOG00000017590	ddx28	92	46.304	ENSUAMG00000016116	DDX28	94	46.304	Ursus_americanus
ENSHCOG00000017590	ddx28	78	48.409	ENSUMAG00000019200	DDX28	88	48.409	Ursus_maritimus
ENSHCOG00000017590	ddx28	74	41.007	ENSVVUG00000012876	DDX28	81	41.007	Vulpes_vulpes
ENSHCOG00000017590	ddx28	93	45.543	ENSXETG00000005435	ddx28	99	45.543	Xenopus_tropicalis
ENSHCOG00000017590	ddx28	98	69.565	ENSXCOG00000012364	ddx28	97	69.565	Xiphophorus_couchianus
ENSHCOG00000017590	ddx28	95	71.402	ENSXMAG00000019603	ddx28	94	71.402	Xiphophorus_maculatus