EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000017644 (Gene tree)
Gene ID: 109531469
Gene Symbol: patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 16289 bases
Position: chrKV880440.1:698938-715226
Accession: 109531469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000026567	zf-C2H2	PF00096.26	1.1e-28	1	4
ENSHCOP00000026567	zf-C2H2	PF00096.26	1.1e-28	2	4
ENSHCOP00000026567	zf-C2H2	PF00096.26	1.1e-28	3	4
ENSHCOP00000026567	zf-C2H2	PF00096.26	1.1e-28	4	4
ENSHCOP00000014300	zf-C2H2	PF00096.26	2.1e-22	1	3
ENSHCOP00000014300	zf-C2H2	PF00096.26	2.1e-22	2	3
ENSHCOP00000014300	zf-C2H2	PF00096.26	2.1e-22	3	3
ENSHCOP00000026567	zf-met	PF12874.7	8.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000021874	-	2217	XM_019895774	ENSHCOP00000026567	738 (aa)	XP_019751333	-
ENSHCOT00000021877	-	7075	XM_019895772	ENSHCOP00000014300	677 (aa)	XP_019751331	UPI00094F1440

Gene Model

Click here to download ENSHCOG00000017644's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017644's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000017644	patz1	61	40.000	ENSHCOG00000002345	zbtb18	78	40.000
ENSHCOG00000017644	patz1	56	33.478	ENSHCOG00000012131	prdm5	64	33.478
ENSHCOG00000017644	patz1	53	31.250	ENSHCOG00000010142	zbtb16a	61	31.250
ENSHCOG00000017644	patz1	60	31.474	ENSHCOG00000015237	-	66	31.609
ENSHCOG00000017644	patz1	81	31.754	ENSHCOG00000013830	zbtb49	63	33.898
ENSHCOG00000017644	patz1	60	37.368	ENSHCOG00000011411	-	81	37.368
ENSHCOG00000017644	patz1	53	32.990	ENSHCOG00000001420	hic1	50	34.021
ENSHCOG00000017644	patz1	50	33.971	ENSHCOG00000001629	-	63	33.971
ENSHCOG00000017644	patz1	59	33.333	ENSHCOG00000015484	-	77	33.628
ENSHCOG00000017644	patz1	52	34.389	ENSHCOG00000021028	-	85	36.095
ENSHCOG00000017644	patz1	50	30.830	ENSHCOG00000007681	-	86	36.471
ENSHCOG00000017644	patz1	51	31.863	ENSHCOG00000018201	-	87	31.193
ENSHCOG00000017644	patz1	65	30.837	ENSHCOG00000001875	zbtb41	62	31.304
ENSHCOG00000017644	patz1	58	35.119	ENSHCOG00000019438	-	84	35.119
ENSHCOG00000017644	patz1	50	32.870	ENSHCOG00000019481	-	69	34.524
ENSHCOG00000017644	patz1	54	31.863	ENSHCOG00000004879	znf341	50	31.863
ENSHCOG00000017644	patz1	56	36.994	ENSHCOG00000014881	-	69	36.994
ENSHCOG00000017644	patz1	62	34.682	ENSHCOG00000015414	-	69	34.896
ENSHCOG00000017644	patz1	57	32.812	ENSHCOG00000007664	-	99	35.610
ENSHCOG00000017644	patz1	55	30.189	ENSHCOG00000010332	-	62	30.189
ENSHCOG00000017644	patz1	52	30.508	ENSHCOG00000008168	-	97	33.898
ENSHCOG00000017644	patz1	67	30.603	ENSHCOG00000004326	GZF1	82	30.603
ENSHCOG00000017644	patz1	56	33.526	ENSHCOG00000019512	-	89	36.970
ENSHCOG00000017644	patz1	53	34.066	ENSHCOG00000019497	-	83	34.066
ENSHCOG00000017644	patz1	66	36.232	ENSHCOG00000020446	bcl6ab	50	36.232
ENSHCOG00000017644	patz1	57	32.618	ENSHCOG00000001252	-	97	32.618
ENSHCOG00000017644	patz1	61	35.714	ENSHCOG00000008234	-	71	35.714
ENSHCOG00000017644	patz1	57	36.095	ENSHCOG00000001942	-	93	39.053
ENSHCOG00000017644	patz1	57	32.877	ENSHCOG00000021073	-	79	30.986
ENSHCOG00000017644	patz1	66	33.333	ENSHCOG00000013654	-	88	39.370
ENSHCOG00000017644	patz1	68	34.951	ENSHCOG00000001662	zbtb16b	66	34.951
ENSHCOG00000017644	patz1	55	30.702	ENSHCOG00000014713	-	96	33.133
ENSHCOG00000017644	patz1	84	35.000	ENSHCOG00000017431	zbtb24	74	35.135
ENSHCOG00000017644	patz1	65	37.963	ENSHCOG00000008115	ZBTB14	92	34.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017644	patz1	98	61.372	ENSG00000100105	PATZ1	98	62.846	Homo_sapiens
ENSHCOG00000017644	patz1	99	78.920	ENSAPOG00000018447	patz1	100	80.885	Acanthochromis_polyacanthus
ENSHCOG00000017644	patz1	93	54.735	ENSAMEG00000007074	PATZ1	100	54.596	Ailuropoda_melanoleuca
ENSHCOG00000017644	patz1	99	76.115	ENSACIG00000016779	patz1	99	78.512	Amphilophus_citrinellus
ENSHCOG00000017644	patz1	93	80.945	ENSAPEG00000013354	patz1	100	80.488	Amphiprion_percula
ENSHCOG00000017644	patz1	99	80.688	ENSATEG00000011260	patz1	100	81.893	Anabas_testudineus
ENSHCOG00000017644	patz1	89	52.135	ENSAPLG00000003934	PATZ1	99	53.028	Anas_platyrhynchos
ENSHCOG00000017644	patz1	98	61.372	ENSANAG00000029603	PATZ1	98	62.846	Aotus_nancymaae
ENSHCOG00000017644	patz1	99	64.768	ENSAMXG00000002273	patz1	99	65.430	Astyanax_mexicanus
ENSHCOG00000017644	patz1	93	57.988	ENSBTAG00000005478	PATZ1	98	62.846	Bos_taurus
ENSHCOG00000017644	patz1	98	61.372	ENSCJAG00000010978	PATZ1	98	62.846	Callithrix_jacchus
ENSHCOG00000017644	patz1	93	57.879	ENSCAFG00000013087	PATZ1	97	62.846	Canis_familiaris
ENSHCOG00000017644	patz1	98	61.388	ENSCHIG00000020203	PATZ1	98	62.846	Capra_hircus
ENSHCOG00000017644	patz1	93	58.136	ENSTSYG00000033183	PATZ1	98	62.846	Carlito_syrichta
ENSHCOG00000017644	patz1	98	61.372	ENSCCAG00000028772	PATZ1	98	62.846	Cebus_capucinus
ENSHCOG00000017644	patz1	98	61.552	ENSCATG00000006101	PATZ1	98	62.846	Cercocebus_atys
ENSHCOG00000017644	patz1	98	52.995	ENSCPBG00000011277	PATZ1	98	59.125	Chrysemys_picta_bellii
ENSHCOG00000017644	patz1	98	61.552	ENSCANG00000024972	PATZ1	98	62.846	Colobus_angolensis_palliatus
ENSHCOG00000017644	patz1	93	56.213	ENSCGRG00001004071	Patz1	98	60.672	Cricetulus_griseus_chok1gshd
ENSHCOG00000017644	patz1	94	59.351	ENSCGRG00000004814	Patz1	100	60.714	Cricetulus_griseus_crigri
ENSHCOG00000017644	patz1	91	77.193	ENSCSEG00000001385	patz1	100	68.613	Cynoglossus_semilaevis
ENSHCOG00000017644	patz1	99	78.990	ENSCVAG00000007684	patz1	99	80.244	Cyprinodon_variegatus
ENSHCOG00000017644	patz1	99	65.995	ENSDARG00000076584	patz1	100	66.771	Danio_rerio
ENSHCOG00000017644	patz1	83	54.250	ENSDNOG00000003183	PATZ1	100	54.308	Dasypus_novemcinctus
ENSHCOG00000017644	patz1	93	58.136	ENSDORG00000023834	Patz1	98	63.043	Dipodomys_ordii
ENSHCOG00000017644	patz1	93	57.988	ENSECAG00000025030	PATZ1	98	62.846	Equus_caballus
ENSHCOG00000017644	patz1	93	73.146	ENSELUG00000002333	patz1	100	73.146	Esox_lucius
ENSHCOG00000017644	patz1	93	57.988	ENSFCAG00000030253	PATZ1	98	62.846	Felis_catus
ENSHCOG00000017644	patz1	90	52.993	ENSFALG00000007450	PATZ1	100	53.971	Ficedula_albicollis
ENSHCOG00000017644	patz1	89	51.304	ENSFDAG00000005614	PATZ1	100	51.594	Fukomys_damarensis
ENSHCOG00000017644	patz1	93	77.017	ENSFHEG00000014755	patz1	100	76.829	Fundulus_heteroclitus
ENSHCOG00000017644	patz1	99	63.221	ENSGMOG00000001062	patz1	100	66.715	Gadus_morhua
ENSHCOG00000017644	patz1	98	53.101	ENSGALG00000006934	PATZ1	100	53.186	Gallus_gallus
ENSHCOG00000017644	patz1	93	77.744	ENSGAFG00000010053	patz1	99	79.394	Gambusia_affinis
ENSHCOG00000017644	patz1	89	58.945	ENSGAGG00000003214	PATZ1	100	58.486	Gopherus_agassizii
ENSHCOG00000017644	patz1	98	61.372	ENSGGOG00000017171	PATZ1	98	62.846	Gorilla_gorilla
ENSHCOG00000017644	patz1	99	66.131	ENSIPUG00000017653	patz1	99	68.465	Ictalurus_punctatus
ENSHCOG00000017644	patz1	98	61.372	ENSSTOG00000020707	PATZ1	98	62.846	Ictidomys_tridecemlineatus
ENSHCOG00000017644	patz1	93	57.080	ENSJJAG00000015259	Patz1	98	61.961	Jaculus_jaculus
ENSHCOG00000017644	patz1	93	73.383	ENSKMAG00000008157	patz1	99	80.183	Kryptolebias_marmoratus
ENSHCOG00000017644	patz1	98	62.847	ENSLAFG00000002317	PATZ1	100	55.461	Loxodonta_africana
ENSHCOG00000017644	patz1	98	61.733	ENSMFAG00000040968	PATZ1	98	62.846	Macaca_fascicularis
ENSHCOG00000017644	patz1	98	61.733	ENSMNEG00000037588	PATZ1	98	62.846	Macaca_nemestrina
ENSHCOG00000017644	patz1	98	61.552	ENSMLEG00000030938	PATZ1	98	62.846	Mandrillus_leucophaeus
ENSHCOG00000017644	patz1	93	82.290	ENSMAMG00000023652	patz1	100	81.679	Mastacembelus_armatus
ENSHCOG00000017644	patz1	89	49.559	ENSMGAG00000008439	PATZ1	100	50.163	Meleagris_gallopavo
ENSHCOG00000017644	patz1	98	61.191	ENSMAUG00000004129	Patz1	98	62.648	Mesocricetus_auratus
ENSHCOG00000017644	patz1	93	57.988	ENSMICG00000005430	PATZ1	98	62.846	Microcebus_murinus
ENSHCOG00000017644	patz1	98	61.191	ENSMOCG00000014488	Patz1	97	62.648	Microtus_ochrogaster
ENSHCOG00000017644	patz1	99	74.471	ENSMMOG00000021679	patz1	99	74.339	Mola_mola
ENSHCOG00000017644	patz1	99	73.540	ENSMALG00000021172	patz1	99	80.503	Monopterus_albus
ENSHCOG00000017644	patz1	98	61.191	MGP_CAROLIEiJ_G0016007	Patz1	97	62.648	Mus_caroli
ENSHCOG00000017644	patz1	98	61.191	ENSMUSG00000020453	Patz1	98	62.648	Mus_musculus
ENSHCOG00000017644	patz1	98	61.191	MGP_PahariEiJ_G0016884	Patz1	98	62.648	Mus_pahari
ENSHCOG00000017644	patz1	98	61.191	MGP_SPRETEiJ_G0016846	Patz1	98	62.648	Mus_spretus
ENSHCOG00000017644	patz1	93	58.136	ENSMLUG00000009942	PATZ1	98	62.846	Myotis_lucifugus
ENSHCOG00000017644	patz1	98	60.980	ENSNGAG00000010268	Patz1	98	62.624	Nannospalax_galili
ENSHCOG00000017644	patz1	99	76.115	ENSNBRG00000016032	patz1	100	76.626	Neolamprologus_brichardi
ENSHCOG00000017644	patz1	62	51.639	ENSMEUG00000016293	PATZ1	99	51.639	Notamacropus_eugenii
ENSHCOG00000017644	patz1	93	57.801	ENSODEG00000003589	PATZ1	98	62.823	Octodon_degus
ENSHCOG00000017644	patz1	93	79.726	ENSONIG00000004248	patz1	100	79.421	Oreochromis_niloticus
ENSHCOG00000017644	patz1	98	53.264	ENSOANG00000014654	PATZ1	100	54.635	Ornithorhynchus_anatinus
ENSHCOG00000017644	patz1	93	78.254	ENSORLG00020010937	patz1	99	78.819	Oryzias_latipes_hni
ENSHCOG00000017644	patz1	93	78.341	ENSORLG00015007396	patz1	100	78.341	Oryzias_latipes_hsok
ENSHCOG00000017644	patz1	99	73.628	ENSOMEG00000006636	patz1	99	79.261	Oryzias_melastigma
ENSHCOG00000017644	patz1	93	54.596	ENSOGAG00000027905	PATZ1	100	54.735	Otolemur_garnettii
ENSHCOG00000017644	patz1	98	61.372	ENSPPAG00000033227	PATZ1	98	62.846	Pan_paniscus
ENSHCOG00000017644	patz1	93	57.988	ENSPPRG00000001573	PATZ1	98	62.846	Panthera_pardus
ENSHCOG00000017644	patz1	81	54.531	ENSPTIG00000007937	PATZ1	90	54.355	Panthera_tigris_altaica
ENSHCOG00000017644	patz1	98	61.372	ENSPTRG00000014268	PATZ1	98	62.846	Pan_troglodytes
ENSHCOG00000017644	patz1	98	61.552	ENSPANG00000006821	PATZ1	96	62.846	Papio_anubis
ENSHCOG00000017644	patz1	99	71.375	ENSPKIG00000019584	patz1	100	68.639	Paramormyrops_kingsleyae
ENSHCOG00000017644	patz1	53	58.678	ENSPSIG00000016553	-	85	58.629	Pelodiscus_sinensis
ENSHCOG00000017644	patz1	51	75.701	ENSPSIG00000011562	-	99	75.701	Pelodiscus_sinensis
ENSHCOG00000017644	patz1	99	76.342	ENSPMGG00000010196	patz1	100	73.543	Periophthalmus_magnuspinnatus
ENSHCOG00000017644	patz1	98	61.121	ENSPEMG00000005321	Patz1	98	62.451	Peromyscus_maniculatus_bairdii
ENSHCOG00000017644	patz1	99	78.990	ENSPLAG00000010425	patz1	99	79.798	Poecilia_latipinna
ENSHCOG00000017644	patz1	99	78.990	ENSPMEG00000000255	patz1	99	79.798	Poecilia_mexicana
ENSHCOG00000017644	patz1	93	73.094	ENSPREG00000002440	patz1	100	73.669	Poecilia_reticulata
ENSHCOG00000017644	patz1	98	61.372	ENSPPYG00000011732	PATZ1	100	54.596	Pongo_abelii
ENSHCOG00000017644	patz1	98	60.000	ENSPCOG00000019729	PATZ1	98	62.846	Propithecus_coquereli
ENSHCOG00000017644	patz1	93	54.457	ENSPVAG00000001749	PATZ1	100	54.596	Pteropus_vampyrus
ENSHCOG00000017644	patz1	93	79.878	ENSPNYG00000013542	patz1	100	79.573	Pundamilia_nyererei
ENSHCOG00000017644	patz1	89	56.598	ENSPNAG00000017222	patz1	100	56.913	Pygocentrus_nattereri
ENSHCOG00000017644	patz1	98	61.552	ENSRBIG00000044231	PATZ1	98	62.846	Rhinopithecus_bieti
ENSHCOG00000017644	patz1	98	61.552	ENSRROG00000037155	PATZ1	98	62.846	Rhinopithecus_roxellana
ENSHCOG00000017644	patz1	98	61.372	ENSSBOG00000003894	PATZ1	98	62.846	Saimiri_boliviensis_boliviensis
ENSHCOG00000017644	patz1	74	95.513	ENSSFOG00015013244	patz1	78	95.513	Scleropages_formosus
ENSHCOG00000017644	patz1	99	52.067	ENSSPUG00000015298	PATZ1	95	58.240	Sphenodon_punctatus
ENSHCOG00000017644	patz1	81	58.669	ENSSSCG00000010027	PATZ1	99	63.133	Sus_scrofa
ENSHCOG00000017644	patz1	99	71.391	ENSTRUG00000015366	patz1	100	76.025	Takifugu_rubripes
ENSHCOG00000017644	patz1	93	54.318	ENSTTRG00000010279	PATZ1	100	54.457	Tursiops_truncatus
ENSHCOG00000017644	patz1	93	57.988	ENSUAMG00000015014	PATZ1	98	62.846	Ursus_americanus
ENSHCOG00000017644	patz1	99	50.654	ENSXETG00000004190	patz1	100	52.847	Xenopus_tropicalis
ENSHCOG00000017644	patz1	99	78.788	ENSXMAG00000015531	patz1	100	78.811	Xiphophorus_maculatus