EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000017671 (Gene tree)
Gene ID: 109530845
Gene Symbol: -
Alias: -
Full Name: UPF0676 protein C1494.01-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 5638 bases
Position: chrKV880407.1:86568-92205
Accession: 109530845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000026602	2OG-FeII_Oxy	PF03171.20	5.6e-14	1	1
ENSHCOP00000014301	2OG-FeII_Oxy	PF03171.20	5.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000021878	-	954	-	ENSHCOP00000014301	317 (aa)	-	-
ENSHCOT00000021903	-	1695	XM_019894756	ENSHCOP00000026602	312 (aa)	XP_019750315	UPI00094E6E9D

Gene Model

Click here to download ENSHCOG00000017671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017671's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000017671	-	100	84.295	ENSHCOG00000017626	si:dkey-10o6.2	100	84.295

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017671	-	83	69.884	ENSAPOG00000011678	si:dkey-10o6.2	90	69.884	Acanthochromis_polyacanthus
ENSHCOG00000017671	-	97	68.647	ENSACIG00000024115	si:dkey-10o6.2	99	66.139	Amphilophus_citrinellus
ENSHCOG00000017671	-	100	66.667	ENSACIG00000011675	-	100	66.667	Amphilophus_citrinellus
ENSHCOG00000017671	-	99	70.227	ENSAOCG00000013068	si:dkey-10o6.2	99	70.227	Amphiprion_ocellaris
ENSHCOG00000017671	-	99	69.903	ENSAPEG00000011246	si:dkey-10o6.2	99	69.903	Amphiprion_percula
ENSHCOG00000017671	-	99	69.775	ENSATEG00000000030	si:dkey-10o6.2	99	69.775	Anabas_testudineus
ENSHCOG00000017671	-	99	71.383	ENSATEG00000021945	si:dkey-10o6.2	99	71.383	Anabas_testudineus
ENSHCOG00000017671	-	99	65.595	ENSATEG00000021952	si:dkey-10o6.2	99	65.595	Anabas_testudineus
ENSHCOG00000017671	-	100	68.269	ENSACLG00000023011	si:dkey-10o6.2	100	68.269	Astatotilapia_calliptera
ENSHCOG00000017671	-	99	57.556	ENSAMXG00000021555	si:dkey-10o6.2	99	58.013	Astyanax_mexicanus
ENSHCOG00000017671	-	75	40.164	ENSCING00000011926	-	99	40.164	Ciona_intestinalis
ENSHCOG00000017671	-	91	35.714	ENSCING00000016920	-	84	35.714	Ciona_intestinalis
ENSHCOG00000017671	-	90	35.986	ENSCING00000022311	-	88	35.986	Ciona_intestinalis
ENSHCOG00000017671	-	91	39.792	ENSCING00000007255	-	86	39.792	Ciona_intestinalis
ENSHCOG00000017671	-	90	36.552	ENSCING00000012500	-	87	36.552	Ciona_intestinalis
ENSHCOG00000017671	-	77	35.223	ENSCSAVG00000001337	-	99	35.223	Ciona_savignyi
ENSHCOG00000017671	-	90	35.959	ENSCSAVG00000004616	-	88	35.959	Ciona_savignyi
ENSHCOG00000017671	-	90	34.948	ENSCSAVG00000000201	-	87	34.948	Ciona_savignyi
ENSHCOG00000017671	-	100	60.577	ENSCSEG00000000918	si:dkey-10o6.2	100	60.000	Cynoglossus_semilaevis
ENSHCOG00000017671	-	100	63.782	ENSCSEG00000000927	si:dkey-10o6.2	100	63.782	Cynoglossus_semilaevis
ENSHCOG00000017671	-	100	68.910	ENSCVAG00000015074	si:dkey-10o6.2	100	68.910	Cyprinodon_variegatus
ENSHCOG00000017671	-	99	61.613	ENSDARG00000074628	si:dkey-10o6.2	89	61.465	Danio_rerio
ENSHCOG00000017671	-	91	30.903	FBgn0053093	CG33093	85	31.250	Drosophila_melanogaster
ENSHCOG00000017671	-	99	31.889	FBgn0053099	CG33099	94	31.889	Drosophila_melanogaster
ENSHCOG00000017671	-	99	63.141	ENSELUG00000003488	si:dkey-10o6.2	99	63.344	Esox_lucius
ENSHCOG00000017671	-	100	67.949	ENSFHEG00000019035	si:dkey-10o6.2	100	67.949	Fundulus_heteroclitus
ENSHCOG00000017671	-	97	60.328	ENSGMOG00000018989	si:dkey-10o6.2	100	60.328	Gadus_morhua
ENSHCOG00000017671	-	99	67.524	ENSGAFG00000006137	si:dkey-10o6.2	99	67.524	Gambusia_affinis
ENSHCOG00000017671	-	99	63.467	ENSGACG00000006806	si:dkey-10o6.2	100	63.077	Gasterosteus_aculeatus
ENSHCOG00000017671	-	100	68.590	ENSHBUG00000008853	si:dkey-10o6.2	100	68.590	Haplochromis_burtoni
ENSHCOG00000017671	-	99	61.613	ENSIPUG00000018911	-	99	61.736	Ictalurus_punctatus
ENSHCOG00000017671	-	99	61.290	ENSIPUG00000018879	si:dkey-10o6.2	91	60.772	Ictalurus_punctatus
ENSHCOG00000017671	-	99	60.450	ENSKMAG00000006197	si:dkey-10o6.2	99	60.450	Kryptolebias_marmoratus
ENSHCOG00000017671	-	100	59.615	ENSLBEG00000003823	si:dkey-10o6.2	91	59.615	Labrus_bergylta
ENSHCOG00000017671	-	99	64.725	ENSLBEG00000003839	si:dkey-10o6.2	99	65.049	Labrus_bergylta
ENSHCOG00000017671	-	99	66.026	ENSMAMG00000023020	si:dkey-10o6.2	99	66.026	Mastacembelus_armatus
ENSHCOG00000017671	-	99	65.064	ENSMAMG00000023022	si:dkey-10o6.2	99	65.064	Mastacembelus_armatus
ENSHCOG00000017671	-	100	65.176	ENSMAMG00000023025	-	100	65.176	Mastacembelus_armatus
ENSHCOG00000017671	-	100	63.898	ENSMAMG00000023026	-	100	63.898	Mastacembelus_armatus
ENSHCOG00000017671	-	100	68.590	ENSMZEG00005012018	si:dkey-10o6.2	100	68.590	Maylandia_zebra
ENSHCOG00000017671	-	97	65.049	ENSMMOG00000020383	si:dkey-10o6.2	95	65.049	Mola_mola
ENSHCOG00000017671	-	100	67.834	ENSMALG00000011300	si:dkey-10o6.2	100	67.834	Monopterus_albus
ENSHCOG00000017671	-	100	62.500	ENSNBRG00000015840	si:dkey-10o6.2	100	62.500	Neolamprologus_brichardi
ENSHCOG00000017671	-	100	67.949	ENSONIG00000015572	si:dkey-10o6.2	100	67.949	Oreochromis_niloticus
ENSHCOG00000017671	-	100	59.744	ENSORLG00000001314	si:dkey-10o6.2	100	59.744	Oryzias_latipes
ENSHCOG00000017671	-	100	61.022	ENSORLG00020002660	si:dkey-10o6.2	100	61.022	Oryzias_latipes_hni
ENSHCOG00000017671	-	100	61.661	ENSOMEG00000003617	si:dkey-10o6.2	97	62.058	Oryzias_melastigma
ENSHCOG00000017671	-	99	59.936	ENSPKIG00000024109	-	98	60.938	Paramormyrops_kingsleyae
ENSHCOG00000017671	-	99	59.032	ENSPKIG00000004206	si:dkey-10o6.2	81	58.730	Paramormyrops_kingsleyae
ENSHCOG00000017671	-	99	57.742	ENSPKIG00000004183	si:dkey-10o6.2	88	57.460	Paramormyrops_kingsleyae
ENSHCOG00000017671	-	99	55.486	ENSPMGG00000021603	si:dkey-10o6.2	99	55.486	Periophthalmus_magnuspinnatus
ENSHCOG00000017671	-	99	66.343	ENSPFOG00000017244	si:dkey-10o6.2	99	65.176	Poecilia_formosa
ENSHCOG00000017671	-	99	66.667	ENSPLAG00000008037	si:dkey-10o6.2	99	66.667	Poecilia_latipinna
ENSHCOG00000017671	-	70	68.493	ENSPMEG00000020748	si:dkey-10o6.2	96	69.484	Poecilia_mexicana
ENSHCOG00000017671	-	99	63.344	ENSPREG00000005108	si:dkey-10o6.2	100	63.141	Poecilia_reticulata
ENSHCOG00000017671	-	100	67.949	ENSPNYG00000010698	si:dkey-10o6.2	100	67.949	Pundamilia_nyererei
ENSHCOG00000017671	-	99	59.425	ENSPNAG00000014123	si:dkey-10o6.2	97	59.425	Pygocentrus_nattereri
ENSHCOG00000017671	-	84	56.439	ENSPNAG00000014485	-	80	56.439	Pygocentrus_nattereri
ENSHCOG00000017671	-	98	60.390	ENSSFOG00015015345	si:dkey-10o6.2	99	60.714	Scleropages_formosus
ENSHCOG00000017671	-	100	68.910	ENSSMAG00000019016	si:dkey-10o6.2	100	68.910	Scophthalmus_maximus
ENSHCOG00000017671	-	100	71.474	ENSSDUG00000000943	si:dkey-10o6.2	100	71.474	Seriola_dumerili
ENSHCOG00000017671	-	100	71.154	ENSSLDG00000003462	si:dkey-10o6.2	100	71.154	Seriola_lalandi_dorsalis
ENSHCOG00000017671	-	99	71.197	ENSSPAG00000020962	si:dkey-10o6.2	99	71.197	Stegastes_partitus
ENSHCOG00000017671	-	99	61.935	ENSTRUG00000019532	si:dkey-10o6.2	99	61.935	Takifugu_rubripes
ENSHCOG00000017671	-	99	64.744	ENSXCOG00000000855	si:dkey-10o6.2	99	64.744	Xiphophorus_couchianus
ENSHCOG00000017671	-	99	66.238	ENSXMAG00000012432	si:dkey-10o6.2	99	66.238	Xiphophorus_maculatus