EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000017676 (Gene tree)
Gene ID: -
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 13957 bases
Position: chrKV879731.1:716767-730723
Accession: ZDB-GENE-030131-6451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000026570	TUDOR	PF00567.24	1.5e-80	1	5
ENSHCOP00000026570	TUDOR	PF00567.24	1.5e-80	2	5
ENSHCOP00000026570	TUDOR	PF00567.24	1.5e-80	3	5
ENSHCOP00000026570	TUDOR	PF00567.24	1.5e-80	4	5
ENSHCOP00000026570	TUDOR	PF00567.24	1.5e-80	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000021864	-	3483	-	ENSHCOP00000026570	1160 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000017676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017676's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017676	rnf17	71	52.174	ENSG00000132972	RNF17	98	33.923	Homo_sapiens
ENSHCOG00000017676	rnf17	91	49.083	ENSAPOG00000017034	rnf17	90	49.083	Acanthochromis_polyacanthus
ENSHCOG00000017676	rnf17	78	39.855	ENSAMEG00000017340	RNF17	63	39.855	Ailuropoda_melanoleuca
ENSHCOG00000017676	rnf17	94	49.789	ENSAOCG00000018283	rnf17	81	49.789	Amphiprion_ocellaris
ENSHCOG00000017676	rnf17	99	50.345	ENSAPEG00000022338	rnf17	93	50.497	Amphiprion_percula
ENSHCOG00000017676	rnf17	90	50.689	ENSATEG00000002067	rnf17	90	50.689	Anabas_testudineus
ENSHCOG00000017676	rnf17	79	40.441	ENSAPLG00000003969	RNF17	71	40.441	Anas_platyrhynchos
ENSHCOG00000017676	rnf17	79	42.647	ENSACAG00000001418	RNF17	73	42.647	Anolis_carolinensis
ENSHCOG00000017676	rnf17	74	41.176	ENSANAG00000029969	RNF17	97	31.229	Aotus_nancymaae
ENSHCOG00000017676	rnf17	96	64.865	ENSACLG00000018279	rnf17	81	64.865	Astatotilapia_calliptera
ENSHCOG00000017676	rnf17	94	42.352	ENSAMXG00000011002	rnf17	91	40.898	Astyanax_mexicanus
ENSHCOG00000017676	rnf17	78	43.478	ENSCJAG00000018937	RNF17	98	34.091	Callithrix_jacchus
ENSHCOG00000017676	rnf17	75	45.455	ENSCAFG00000007418	RNF17	65	45.455	Canis_familiaris
ENSHCOG00000017676	rnf17	79	39.855	ENSCHIG00000026716	RNF17	76	39.855	Capra_hircus
ENSHCOG00000017676	rnf17	78	44.203	ENSTSYG00000000365	RNF17	98	33.017	Carlito_syrichta
ENSHCOG00000017676	rnf17	78	43.478	ENSCCAG00000026725	RNF17	98	33.601	Cebus_capucinus
ENSHCOG00000017676	rnf17	78	44.928	ENSCATG00000040352	RNF17	98	33.923	Cercocebus_atys
ENSHCOG00000017676	rnf17	79	41.304	ENSCLAG00000004127	RNF17	63	41.304	Chinchilla_lanigera
ENSHCOG00000017676	rnf17	78	44.928	ENSCSAG00000018019	RNF17	63	44.928	Chlorocebus_sabaeus
ENSHCOG00000017676	rnf17	79	46.377	ENSCPBG00000020920	RNF17	66	46.377	Chrysemys_picta_bellii
ENSHCOG00000017676	rnf17	78	44.203	ENSCANG00000032927	RNF17	98	33.547	Colobus_angolensis_palliatus
ENSHCOG00000017676	rnf17	78	41.304	ENSCGRG00001022658	Rnf17	62	41.304	Cricetulus_griseus_chok1gshd
ENSHCOG00000017676	rnf17	78	41.304	ENSCGRG00000009924	Rnf17	62	41.304	Cricetulus_griseus_crigri
ENSHCOG00000017676	rnf17	94	65.789	ENSCSEG00000008626	rnf17	76	65.789	Cynoglossus_semilaevis
ENSHCOG00000017676	rnf17	91	41.363	ENSCVAG00000017008	rnf17	100	41.363	Cyprinodon_variegatus
ENSHCOG00000017676	rnf17	86	48.175	ENSDARG00000056387	rnf17	69	48.175	Danio_rerio
ENSHCOG00000017676	rnf17	79	39.130	ENSDNOG00000006115	RNF17	62	39.130	Dasypus_novemcinctus
ENSHCOG00000017676	rnf17	79	41.304	ENSECAG00000017152	RNF17	62	41.304	Equus_caballus
ENSHCOG00000017676	rnf17	55	31.624	ENSEEUG00000000332	RNF17	50	31.624	Erinaceus_europaeus
ENSHCOG00000017676	rnf17	99	42.101	ENSELUG00000005626	rnf17	87	42.219	Esox_lucius
ENSHCOG00000017676	rnf17	78	39.855	ENSFCAG00000004914	RNF17	76	39.855	Felis_catus
ENSHCOG00000017676	rnf17	82	43.478	ENSFALG00000008766	RNF17	68	43.478	Ficedula_albicollis
ENSHCOG00000017676	rnf17	78	39.855	ENSFDAG00000017857	RNF17	62	39.855	Fukomys_damarensis
ENSHCOG00000017676	rnf17	99	46.560	ENSFHEG00000014822	rnf17	85	46.560	Fundulus_heteroclitus
ENSHCOG00000017676	rnf17	50	46.186	ENSGMOG00000015560	-	98	46.186	Gadus_morhua
ENSHCOG00000017676	rnf17	99	48.010	ENSGAFG00000004463	rnf17	99	48.010	Gambusia_affinis
ENSHCOG00000017676	rnf17	68	33.702	ENSGAGG00000016999	RNF17	59	33.702	Gopherus_agassizii
ENSHCOG00000017676	rnf17	78	44.928	ENSGGOG00000014491	RNF17	98	33.708	Gorilla_gorilla
ENSHCOG00000017676	rnf17	93	50.000	ENSHBUG00000003554	rnf17	79	50.000	Haplochromis_burtoni
ENSHCOG00000017676	rnf17	78	41.304	ENSHGLG00000007270	RNF17	62	41.304	Heterocephalus_glaber_female
ENSHCOG00000017676	rnf17	78	41.304	ENSHGLG00100017393	RNF17	63	41.304	Heterocephalus_glaber_male
ENSHCOG00000017676	rnf17	97	42.197	ENSIPUG00000001087	rnf17	93	42.124	Ictalurus_punctatus
ENSHCOG00000017676	rnf17	79	39.130	ENSJJAG00000016584	Rnf17	62	39.130	Jaculus_jaculus
ENSHCOG00000017676	rnf17	96	75.758	ENSKMAG00000013403	rnf17	82	75.758	Kryptolebias_marmoratus
ENSHCOG00000017676	rnf17	89	52.647	ENSLBEG00000014910	rnf17	85	52.647	Labrus_bergylta
ENSHCOG00000017676	rnf17	70	34.244	ENSLACG00000000323	RNF17	83	34.454	Latimeria_chalumnae
ENSHCOG00000017676	rnf17	78	46.763	ENSLOCG00000010768	rnf17	63	46.763	Lepisosteus_oculatus
ENSHCOG00000017676	rnf17	78	44.928	ENSMFAG00000032388	RNF17	98	33.923	Macaca_fascicularis
ENSHCOG00000017676	rnf17	79	44.928	ENSMMUG00000014610	RNF17	98	33.923	Macaca_mulatta
ENSHCOG00000017676	rnf17	79	44.928	ENSMNEG00000011234	RNF17	98	34.421	Macaca_nemestrina
ENSHCOG00000017676	rnf17	78	44.928	ENSMLEG00000030227	RNF17	78	32.707	Mandrillus_leucophaeus
ENSHCOG00000017676	rnf17	99	52.083	ENSMAMG00000020403	rnf17	99	52.083	Mastacembelus_armatus
ENSHCOG00000017676	rnf17	96	64.865	ENSMZEG00005019166	rnf17	81	64.865	Maylandia_zebra
ENSHCOG00000017676	rnf17	78	40.580	ENSMGAG00000015138	RNF17	81	40.580	Meleagris_gallopavo
ENSHCOG00000017676	rnf17	81	33.716	ENSMAUG00000004788	Rnf17	66	33.716	Mesocricetus_auratus
ENSHCOG00000017676	rnf17	78	39.855	ENSMICG00000010364	RNF17	76	39.855	Microcebus_murinus
ENSHCOG00000017676	rnf17	52	41.304	ENSMOCG00000011818	-	79	41.304	Microtus_ochrogaster
ENSHCOG00000017676	rnf17	91	55.474	ENSMMOG00000019514	rnf17	91	55.474	Mola_mola
ENSHCOG00000017676	rnf17	78	45.652	ENSMODG00000007827	RNF17	61	45.652	Monodelphis_domestica
ENSHCOG00000017676	rnf17	85	55.556	ENSMALG00000016943	rnf17	82	54.217	Monopterus_albus
ENSHCOG00000017676	rnf17	78	39.130	MGP_CAROLIEiJ_G0019337	Rnf17	62	39.130	Mus_caroli
ENSHCOG00000017676	rnf17	78	40.580	ENSMUSG00000000365	Rnf17	62	40.580	Mus_musculus
ENSHCOG00000017676	rnf17	78	41.304	MGP_PahariEiJ_G0030355	Rnf17	62	41.304	Mus_pahari
ENSHCOG00000017676	rnf17	78	41.304	MGP_SPRETEiJ_G0020228	Rnf17	62	41.304	Mus_spretus
ENSHCOG00000017676	rnf17	78	39.855	ENSMPUG00000013305	RNF17	63	39.855	Mustela_putorius_furo
ENSHCOG00000017676	rnf17	78	41.304	ENSMLUG00000003903	RNF17	63	41.304	Myotis_lucifugus
ENSHCOG00000017676	rnf17	78	42.029	ENSNGAG00000013553	Rnf17	62	42.029	Nannospalax_galili
ENSHCOG00000017676	rnf17	99	45.644	ENSNBRG00000012006	rnf17	99	45.644	Neolamprologus_brichardi
ENSHCOG00000017676	rnf17	79	44.928	ENSNLEG00000013780	RNF17	98	34.249	Nomascus_leucogenys
ENSHCOG00000017676	rnf17	96	64.865	ENSONIG00000015746	rnf17	99	47.778	Oreochromis_niloticus
ENSHCOG00000017676	rnf17	79	41.304	ENSOCUG00000007384	RNF17	63	41.304	Oryctolagus_cuniculus
ENSHCOG00000017676	rnf17	94	44.755	ENSORLG00000012818	rnf17	91	44.842	Oryzias_latipes
ENSHCOG00000017676	rnf17	94	44.416	ENSORLG00020009879	-	81	45.013	Oryzias_latipes_hni
ENSHCOG00000017676	rnf17	94	44.182	ENSORLG00015013027	-	81	44.690	Oryzias_latipes_hsok
ENSHCOG00000017676	rnf17	91	43.176	ENSOMEG00000009891	rnf17	99	43.199	Oryzias_melastigma
ENSHCOG00000017676	rnf17	78	40.580	ENSOGAG00000014803	RNF17	63	40.580	Otolemur_garnettii
ENSHCOG00000017676	rnf17	79	39.855	ENSOARG00000014641	RNF17	63	39.855	Ovis_aries
ENSHCOG00000017676	rnf17	78	44.928	ENSPPAG00000028779	RNF17	98	34.087	Pan_paniscus
ENSHCOG00000017676	rnf17	78	39.855	ENSPPRG00000009230	RNF17	75	39.855	Panthera_pardus
ENSHCOG00000017676	rnf17	78	39.855	ENSPTIG00000001738	RNF17	75	39.855	Panthera_tigris_altaica
ENSHCOG00000017676	rnf17	78	44.928	ENSPTRG00000005713	RNF17	98	34.087	Pan_troglodytes
ENSHCOG00000017676	rnf17	79	44.928	ENSPANG00000007640	RNF17	98	33.923	Papio_anubis
ENSHCOG00000017676	rnf17	81	42.940	ENSPKIG00000001648	rnf17	82	42.940	Paramormyrops_kingsleyae
ENSHCOG00000017676	rnf17	78	45.652	ENSPSIG00000011245	RNF17	79	58.696	Pelodiscus_sinensis
ENSHCOG00000017676	rnf17	78	41.304	ENSPEMG00000008693	Rnf17	62	41.304	Peromyscus_maniculatus_bairdii
ENSHCOG00000017676	rnf17	67	33.890	ENSPCIG00000009190	-	87	33.890	Phascolarctos_cinereus
ENSHCOG00000017676	rnf17	92	48.088	ENSPFOG00000007124	rnf17	79	48.569	Poecilia_formosa
ENSHCOG00000017676	rnf17	93	48.498	ENSPLAG00000006198	rnf17	80	49.063	Poecilia_latipinna
ENSHCOG00000017676	rnf17	93	48.584	ENSPMEG00000022432	rnf17	91	48.732	Poecilia_mexicana
ENSHCOG00000017676	rnf17	90	52.101	ENSPREG00000001414	rnf17	94	47.987	Poecilia_reticulata
ENSHCOG00000017676	rnf17	78	44.928	ENSPPYG00000005215	RNF17	63	44.928	Pongo_abelii
ENSHCOG00000017676	rnf17	59	47.727	ENSPCOG00000020211	RNF17	52	47.727	Propithecus_coquereli
ENSHCOG00000017676	rnf17	78	43.478	ENSPVAG00000013021	RNF17	64	43.478	Pteropus_vampyrus
ENSHCOG00000017676	rnf17	99	41.660	ENSPNAG00000027505	rnf17	99	41.660	Pygocentrus_nattereri
ENSHCOG00000017676	rnf17	78	41.304	ENSRNOG00000008059	Rnf17	62	41.304	Rattus_norvegicus
ENSHCOG00000017676	rnf17	87	32.146	ENSRBIG00000027010	RNF17	79	32.283	Rhinopithecus_bieti
ENSHCOG00000017676	rnf17	79	44.928	ENSRROG00000022801	RNF17	98	33.977	Rhinopithecus_roxellana
ENSHCOG00000017676	rnf17	78	42.029	ENSSBOG00000021661	RNF17	98	32.797	Saimiri_boliviensis_boliviensis
ENSHCOG00000017676	rnf17	78	45.652	ENSSHAG00000005609	RNF17	62	45.652	Sarcophilus_harrisii
ENSHCOG00000017676	rnf17	86	42.390	ENSSFOG00015023037	rnf17	89	42.390	Scleropages_formosus
ENSHCOG00000017676	rnf17	86	49.294	ENSSMAG00000007429	rnf17	81	49.294	Scophthalmus_maximus
ENSHCOG00000017676	rnf17	91	50.916	ENSSDUG00000013530	rnf17	91	50.919	Seriola_dumerili
ENSHCOG00000017676	rnf17	86	56.627	ENSSLDG00000019577	rnf17	81	56.627	Seriola_lalandi_dorsalis
ENSHCOG00000017676	rnf17	70	40.580	ENSSARG00000003016	RNF17	50	40.580	Sorex_araneus
ENSHCOG00000017676	rnf17	90	45.455	ENSSPUG00000008917	RNF17	78	45.455	Sphenodon_punctatus
ENSHCOG00000017676	rnf17	89	49.717	ENSSPAG00000001925	rnf17	89	49.716	Stegastes_partitus
ENSHCOG00000017676	rnf17	79	41.304	ENSSSCG00000009572	RNF17	70	41.304	Sus_scrofa
ENSHCOG00000017676	rnf17	52	31.124	ENSTGUG00000011267	-	100	31.124	Taeniopygia_guttata
ENSHCOG00000017676	rnf17	93	43.025	ENSTRUG00000015498	rnf17	83	43.025	Takifugu_rubripes
ENSHCOG00000017676	rnf17	85	42.770	ENSTNIG00000015681	rnf17	99	42.596	Tetraodon_nigroviridis
ENSHCOG00000017676	rnf17	70	40.580	ENSTBEG00000000282	RNF17	55	40.580	Tupaia_belangeri
ENSHCOG00000017676	rnf17	68	41.304	ENSTTRG00000012698	RNF17	54	41.304	Tursiops_truncatus
ENSHCOG00000017676	rnf17	78	39.855	ENSVVUG00000006226	RNF17	74	39.855	Vulpes_vulpes
ENSHCOG00000017676	rnf17	73	42.446	ENSXETG00000034020	RNF17	83	42.446	Xenopus_tropicalis
ENSHCOG00000017676	rnf17	90	48.187	ENSXCOG00000018295	rnf17	90	48.826	Xiphophorus_couchianus
ENSHCOG00000017676	rnf17	90	47.887	ENSXMAG00000014747	rnf17	90	48.547	Xiphophorus_maculatus