EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000017691 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 6705 bases
Position: chrKV880079.1:3745825-3752529
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000026606	RVT_1	PF00078.27	1.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000021940	-	621	-	ENSHCOP00000026606	206 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000017691's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017691's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000017691	-	90	96.757	ENSHCOG00000011588	-	90	96.757
ENSHCOG00000017691	-	81	56.805	ENSHCOG00000000129	-	83	56.805
ENSHCOG00000017691	-	67	100.000	ENSHCOG00000015689	-	57	100.000
ENSHCOG00000017691	-	78	56.250	ENSHCOG00000006864	-	75	56.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017691	-	87	56.667	ENSEBUG00000004867	-	65	56.667	Eptatretus_burgeri
ENSHCOG00000017691	-	85	31.818	ENSMZEG00005022588	-	51	31.818	Maylandia_zebra
ENSHCOG00000017691	-	89	30.435	ENSMALG00000012850	-	53	30.435	Monopterus_albus
ENSHCOG00000017691	-	68	30.065	ENSORLG00020022651	-	75	30.065	Oryzias_latipes_hni
ENSHCOG00000017691	-	86	30.899	ENSPKIG00000018770	-	74	30.899	Paramormyrops_kingsleyae
ENSHCOG00000017691	-	85	30.168	ENSPSIG00000001144	-	52	30.168	Pelodiscus_sinensis
ENSHCOG00000017691	-	66	31.387	ENSPSIG00000001954	-	51	31.387	Pelodiscus_sinensis
ENSHCOG00000017691	-	66	31.387	ENSPSIG00000000095	-	61	31.387	Pelodiscus_sinensis
ENSHCOG00000017691	-	69	30.556	ENSPSIG00000001834	-	57	30.556	Pelodiscus_sinensis
ENSHCOG00000017691	-	85	30.168	ENSPSIG00000001253	-	62	30.168	Pelodiscus_sinensis
ENSHCOG00000017691	-	85	30.168	ENSPSIG00000001970	-	52	30.168	Pelodiscus_sinensis
ENSHCOG00000017691	-	85	30.168	ENSPSIG00000000817	-	50	30.168	Pelodiscus_sinensis
ENSHCOG00000017691	-	85	55.429	ENSSDUG00000021943	-	85	55.429	Seriola_dumerili
ENSHCOG00000017691	-	79	52.469	ENSSDUG00000004709	-	92	52.469	Seriola_dumerili
ENSHCOG00000017691	-	50	57.843	ENSSLDG00000018145	-	59	57.843	Seriola_lalandi_dorsalis