EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000017802 (Gene tree)
Gene ID: 109511141
Gene Symbol: tnrc6c2
Alias: si:dkey-10p5.9
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 32572 bases
Position: chrKV880534.1:7563102-7595673
Accession: 109511141
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000026677	RRM_1	PF00076.22	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000022066	-	9199	XM_019861961	ENSHCOP00000026677	1880 (aa)	XP_019717520	UPI00094E35E3

Gene Model

Click here to download ENSHCOG00000017802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017802's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017802	tnrc6c2	99	78.190	ENSAOCG00000017648	tnrc6c2	99	78.696	Amphiprion_ocellaris
ENSHCOG00000017802	tnrc6c2	83	84.978	ENSATEG00000003656	tnrc6c2	57	85.526	Anabas_testudineus
ENSHCOG00000017802	tnrc6c2	99	77.582	ENSACLG00000006469	tnrc6c2	99	78.251	Astatotilapia_calliptera
ENSHCOG00000017802	tnrc6c2	87	56.324	ENSAMXG00000009579	tnrc6c2	100	56.213	Astyanax_mexicanus
ENSHCOG00000017802	tnrc6c2	88	57.355	ENSDARG00000103851	tnrc6c2	100	57.134	Danio_rerio
ENSHCOG00000017802	tnrc6c2	79	66.162	ENSELUG00000008149	-	99	51.913	Esox_lucius
ENSHCOG00000017802	tnrc6c2	87	59.065	ENSELUG00000007206	tnrc6c2	100	59.395	Esox_lucius
ENSHCOG00000017802	tnrc6c2	92	74.269	ENSFHEG00000003901	tnrc6c2	100	75.858	Fundulus_heteroclitus
ENSHCOG00000017802	tnrc6c2	99	77.540	ENSHBUG00000018310	tnrc6c2	99	78.209	Haplochromis_burtoni
ENSHCOG00000017802	tnrc6c2	87	52.070	ENSIPUG00000022767	tnrc6c2	100	50.767	Ictalurus_punctatus
ENSHCOG00000017802	tnrc6c2	87	81.345	ENSMAMG00000001718	tnrc6c2	100	81.791	Mastacembelus_armatus
ENSHCOG00000017802	tnrc6c2	99	77.582	ENSMZEG00005023905	tnrc6c2	99	78.251	Maylandia_zebra
ENSHCOG00000017802	tnrc6c2	87	79.147	ENSMALG00000020932	tnrc6c2	100	79.520	Monopterus_albus
ENSHCOG00000017802	tnrc6c2	83	85.120	ENSNBRG00000000452	tnrc6c2	57	85.011	Neolamprologus_brichardi
ENSHCOG00000017802	tnrc6c2	85	77.868	ENSONIG00000018123	tnrc6c2	100	78.394	Oreochromis_niloticus
ENSHCOG00000017802	tnrc6c2	100	73.579	ENSORLG00000003327	tnrc6c2	99	73.832	Oryzias_latipes
ENSHCOG00000017802	tnrc6c2	100	73.593	ENSORLG00020010730	tnrc6c2	99	73.899	Oryzias_latipes_hni
ENSHCOG00000017802	tnrc6c2	100	73.474	ENSORLG00015009232	tnrc6c2	99	74.045	Oryzias_latipes_hsok
ENSHCOG00000017802	tnrc6c2	100	73.803	ENSOMEG00000017952	tnrc6c2	99	74.284	Oryzias_melastigma
ENSHCOG00000017802	tnrc6c2	91	73.312	ENSPFOG00000011590	tnrc6c2	53	74.051	Poecilia_formosa
ENSHCOG00000017802	tnrc6c2	87	72.040	ENSPLAG00000006992	tnrc6c2	100	72.830	Poecilia_latipinna
ENSHCOG00000017802	tnrc6c2	99	73.553	ENSPMEG00000012946	tnrc6c2	99	74.758	Poecilia_mexicana
ENSHCOG00000017802	tnrc6c2	87	72.623	ENSPREG00000015823	tnrc6c2	100	73.301	Poecilia_reticulata
ENSHCOG00000017802	tnrc6c2	87	79.333	ENSPNYG00000002582	tnrc6c2	100	80.133	Pundamilia_nyererei
ENSHCOG00000017802	tnrc6c2	87	55.746	ENSPNAG00000026838	tnrc6c2	100	55.340	Pygocentrus_nattereri
ENSHCOG00000017802	tnrc6c2	87	79.651	ENSSMAG00000015145	tnrc6c2	100	80.433	Scophthalmus_maximus
ENSHCOG00000017802	tnrc6c2	87	81.950	ENSSDUG00000020741	tnrc6c2	100	83.586	Seriola_dumerili
ENSHCOG00000017802	tnrc6c2	87	81.890	ENSSLDG00000002077	tnrc6c2	100	83.465	Seriola_lalandi_dorsalis
ENSHCOG00000017802	tnrc6c2	99	80.339	ENSSPAG00000013052	tnrc6c2	99	80.763	Stegastes_partitus
ENSHCOG00000017802	tnrc6c2	84	81.630	ENSTNIG00000004178	tnrc6c2	95	81.848	Tetraodon_nigroviridis
ENSHCOG00000017802	tnrc6c2	87	77.016	ENSXMAG00000006739	tnrc6c2	100	76.761	Xiphophorus_maculatus