EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000017818 (Gene tree)
Gene ID: 109510878
Gene Symbol: exosc5
Alias: si:ch211-194n6.2|zgc:153707
Full Name: exosome component 5
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 3119 bases
Position: chrKV880533.1:1311881-1314999
Accession: 109510878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000014450	RNase_PH	PF01138.21	3e-22	1	1
ENSHCOP00000014450	RNase_PH_C	PF03725.15	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000022080	-	794	XM_019861552	ENSHCOP00000014450	237 (aa)	XP_019717111	UPI00094E1647

Gene Model

Click here to download ENSHCOG00000017818's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017818's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017818	exosc5	88	63.636	ENSG00000077348	EXOSC5	97	75.000	Homo_sapiens
ENSHCOG00000017818	exosc5	92	80.365	ENSAPOG00000012910	exosc5	99	80.365	Acanthochromis_polyacanthus
ENSHCOG00000017818	exosc5	88	64.593	ENSAMEG00000011623	EXOSC5	89	64.593	Ailuropoda_melanoleuca
ENSHCOG00000017818	exosc5	92	79.452	ENSACIG00000024067	exosc5	100	79.452	Amphilophus_citrinellus
ENSHCOG00000017818	exosc5	92	81.651	ENSAOCG00000006601	exosc5	99	81.651	Amphiprion_ocellaris
ENSHCOG00000017818	exosc5	92	81.651	ENSAPEG00000014199	exosc5	99	81.651	Amphiprion_percula
ENSHCOG00000017818	exosc5	93	83.636	ENSATEG00000008886	exosc5	100	83.636	Anabas_testudineus
ENSHCOG00000017818	exosc5	87	57.282	ENSACAG00000003784	EXOSC5	92	57.282	Anolis_carolinensis
ENSHCOG00000017818	exosc5	88	49.282	ENSANAG00000022449	EXOSC5	86	49.282	Aotus_nancymaae
ENSHCOG00000017818	exosc5	92	81.279	ENSACLG00000020944	exosc5	94	81.279	Astatotilapia_calliptera
ENSHCOG00000017818	exosc5	87	77.295	ENSAMXG00000034946	exosc5	94	77.295	Astyanax_mexicanus
ENSHCOG00000017818	exosc5	67	30.994	ENSAMXG00000030867	exosc4	69	30.994	Astyanax_mexicanus
ENSHCOG00000017818	exosc5	88	63.158	ENSBTAG00000016034	EXOSC5	89	63.158	Bos_taurus
ENSHCOG00000017818	exosc5	88	63.636	ENSCJAG00000020152	EXOSC5	89	63.636	Callithrix_jacchus
ENSHCOG00000017818	exosc5	81	30.244	ENSCJAG00000021458	EXOSC4	82	30.244	Callithrix_jacchus
ENSHCOG00000017818	exosc5	88	64.115	ENSCAFG00000032654	EXOSC5	89	64.115	Canis_familiaris
ENSHCOG00000017818	exosc5	88	64.115	ENSCAFG00020014770	EXOSC5	89	64.115	Canis_lupus_dingo
ENSHCOG00000017818	exosc5	88	63.158	ENSCHIG00000026498	EXOSC5	89	63.158	Capra_hircus
ENSHCOG00000017818	exosc5	95	60.268	ENSTSYG00000014183	EXOSC5	95	60.268	Carlito_syrichta
ENSHCOG00000017818	exosc5	78	44.324	ENSCAPG00000005778	EXOSC5	100	44.324	Cavia_aperea
ENSHCOG00000017818	exosc5	99	58.403	ENSCPOG00000035731	EXOSC5	99	58.403	Cavia_porcellus
ENSHCOG00000017818	exosc5	88	64.115	ENSCCAG00000013179	EXOSC5	89	64.115	Cebus_capucinus
ENSHCOG00000017818	exosc5	91	63.134	ENSCATG00000044084	EXOSC5	92	63.134	Cercocebus_atys
ENSHCOG00000017818	exosc5	88	62.201	ENSCLAG00000001186	EXOSC5	89	62.201	Chinchilla_lanigera
ENSHCOG00000017818	exosc5	91	63.134	ENSCSAG00000003522	EXOSC5	83	63.134	Chlorocebus_sabaeus
ENSHCOG00000017818	exosc5	88	61.244	ENSCHOG00000000047	EXOSC5	89	61.244	Choloepus_hoffmanni
ENSHCOG00000017818	exosc5	86	35.681	ENSCING00000005595	-	91	35.681	Ciona_intestinalis
ENSHCOG00000017818	exosc5	86	35.514	ENSCSAVG00000009006	-	91	35.514	Ciona_savignyi
ENSHCOG00000017818	exosc5	91	62.673	ENSCANG00000039325	EXOSC5	92	62.673	Colobus_angolensis_palliatus
ENSHCOG00000017818	exosc5	88	63.636	ENSCGRG00001017207	Exosc5	89	63.636	Cricetulus_griseus_chok1gshd
ENSHCOG00000017818	exosc5	81	30.732	ENSCGRG00001020452	Exosc4	82	30.732	Cricetulus_griseus_chok1gshd
ENSHCOG00000017818	exosc5	81	51.562	ENSCGRG00000003031	Exosc5	100	51.562	Cricetulus_griseus_crigri
ENSHCOG00000017818	exosc5	81	30.732	ENSCGRG00000016505	Exosc4	82	30.732	Cricetulus_griseus_crigri
ENSHCOG00000017818	exosc5	92	80.645	ENSCSEG00000007190	exosc5	99	80.645	Cynoglossus_semilaevis
ENSHCOG00000017818	exosc5	92	81.364	ENSCVAG00000009396	exosc5	100	81.364	Cyprinodon_variegatus
ENSHCOG00000017818	exosc5	87	75.845	ENSDARG00000040557	exosc5	93	75.845	Danio_rerio
ENSHCOG00000017818	exosc5	67	30.409	ENSDARG00000103432	exosc4	70	30.409	Danio_rerio
ENSHCOG00000017818	exosc5	89	59.906	ENSDNOG00000017137	EXOSC5	92	59.906	Dasypus_novemcinctus
ENSHCOG00000017818	exosc5	97	59.130	ENSDORG00000003611	Exosc5	99	59.735	Dipodomys_ordii
ENSHCOG00000017818	exosc5	88	37.981	FBgn0037815	Rrp46	89	37.981	Drosophila_melanogaster
ENSHCOG00000017818	exosc5	95	59.471	ENSETEG00000009358	EXOSC5	97	59.471	Echinops_telfairi
ENSHCOG00000017818	exosc5	92	52.752	ENSEBUG00000000312	exosc5	96	52.752	Eptatretus_burgeri
ENSHCOG00000017818	exosc5	71	31.319	ENSEBUG00000014277	exosc4	74	31.319	Eptatretus_burgeri
ENSHCOG00000017818	exosc5	91	62.844	ENSEASG00005006327	EXOSC5	83	62.844	Equus_asinus_asinus
ENSHCOG00000017818	exosc5	88	64.115	ENSECAG00000024210	EXOSC5	89	64.115	Equus_caballus
ENSHCOG00000017818	exosc5	76	57.542	ENSEEUG00000007299	EXOSC5	75	57.542	Erinaceus_europaeus
ENSHCOG00000017818	exosc5	92	77.626	ENSELUG00000021719	exosc5	100	77.626	Esox_lucius
ENSHCOG00000017818	exosc5	67	31.579	ENSELUG00000021011	exosc4	69	31.579	Esox_lucius
ENSHCOG00000017818	exosc5	63	30.625	ENSELUG00000015515	exosc6	57	30.625	Esox_lucius
ENSHCOG00000017818	exosc5	88	63.636	ENSFCAG00000033818	EXOSC5	89	63.636	Felis_catus
ENSHCOG00000017818	exosc5	80	62.632	ENSFALG00000012886	EXOSC5	99	62.632	Ficedula_albicollis
ENSHCOG00000017818	exosc5	88	62.201	ENSFDAG00000001207	EXOSC5	89	62.201	Fukomys_damarensis
ENSHCOG00000017818	exosc5	81	30.097	ENSFDAG00000006708	EXOSC4	82	30.097	Fukomys_damarensis
ENSHCOG00000017818	exosc5	95	80.531	ENSFHEG00000021919	exosc5	95	80.531	Fundulus_heteroclitus
ENSHCOG00000017818	exosc5	63	31.288	ENSGMOG00000002113	exosc4	65	31.288	Gadus_morhua
ENSHCOG00000017818	exosc5	89	82.464	ENSGMOG00000015865	exosc5	98	82.464	Gadus_morhua
ENSHCOG00000017818	exosc5	95	80.000	ENSGAFG00000015767	exosc5	95	80.000	Gambusia_affinis
ENSHCOG00000017818	exosc5	90	83.568	ENSGACG00000012986	exosc5	99	83.568	Gasterosteus_aculeatus
ENSHCOG00000017818	exosc5	65	57.792	ENSGAGG00000003166	EXOSC5	84	57.792	Gopherus_agassizii
ENSHCOG00000017818	exosc5	89	63.208	ENSGGOG00000008428	EXOSC5	90	63.208	Gorilla_gorilla
ENSHCOG00000017818	exosc5	92	81.279	ENSHBUG00000010082	exosc5	94	81.279	Haplochromis_burtoni
ENSHCOG00000017818	exosc5	81	30.097	ENSHGLG00000016299	EXOSC4	82	30.097	Heterocephalus_glaber_female
ENSHCOG00000017818	exosc5	88	61.722	ENSHGLG00000008975	EXOSC5	89	61.722	Heterocephalus_glaber_female
ENSHCOG00000017818	exosc5	81	30.097	ENSHGLG00100018786	EXOSC4	82	30.097	Heterocephalus_glaber_male
ENSHCOG00000017818	exosc5	88	61.244	ENSHGLG00100016097	EXOSC5	89	61.244	Heterocephalus_glaber_male
ENSHCOG00000017818	exosc5	67	31.579	ENSIPUG00000011922	Exosc4	69	31.579	Ictalurus_punctatus
ENSHCOG00000017818	exosc5	87	77.295	ENSIPUG00000011820	Exosc5	95	77.295	Ictalurus_punctatus
ENSHCOG00000017818	exosc5	91	63.303	ENSSTOG00000019738	EXOSC5	93	63.303	Ictidomys_tridecemlineatus
ENSHCOG00000017818	exosc5	90	61.972	ENSJJAG00000013914	Exosc5	96	61.972	Jaculus_jaculus
ENSHCOG00000017818	exosc5	81	30.732	ENSJJAG00000009655	Exosc4	82	30.732	Jaculus_jaculus
ENSHCOG00000017818	exosc5	92	80.365	ENSKMAG00000009517	exosc5	100	80.365	Kryptolebias_marmoratus
ENSHCOG00000017818	exosc5	93	66.364	ENSLBEG00000018216	exosc5	100	66.364	Labrus_bergylta
ENSHCOG00000017818	exosc5	76	49.444	ENSLACG00000018233	EXOSC5	90	49.444	Latimeria_chalumnae
ENSHCOG00000017818	exosc5	70	30.556	ENSLOCG00000008878	exosc4	72	30.556	Lepisosteus_oculatus
ENSHCOG00000017818	exosc5	89	67.136	ENSLOCG00000014220	exosc5	91	67.136	Lepisosteus_oculatus
ENSHCOG00000017818	exosc5	88	61.722	ENSLAFG00000013753	EXOSC5	89	61.722	Loxodonta_africana
ENSHCOG00000017818	exosc5	91	63.134	ENSMFAG00000045851	EXOSC5	83	63.134	Macaca_fascicularis
ENSHCOG00000017818	exosc5	91	63.134	ENSMMUG00000014345	EXOSC5	92	63.134	Macaca_mulatta
ENSHCOG00000017818	exosc5	91	63.134	ENSMNEG00000044403	EXOSC5	83	63.134	Macaca_nemestrina
ENSHCOG00000017818	exosc5	91	63.134	ENSMLEG00000042915	EXOSC5	92	63.134	Mandrillus_leucophaeus
ENSHCOG00000017818	exosc5	95	82.301	ENSMAMG00000014323	exosc5	96	82.301	Mastacembelus_armatus
ENSHCOG00000017818	exosc5	92	81.279	ENSMZEG00005024196	exosc5	94	81.481	Maylandia_zebra
ENSHCOG00000017818	exosc5	84	59.596	ENSMAUG00000010419	Exosc5	87	59.596	Mesocricetus_auratus
ENSHCOG00000017818	exosc5	81	30.732	ENSMAUG00000007911	Exosc4	82	30.732	Mesocricetus_auratus
ENSHCOG00000017818	exosc5	88	63.636	ENSMICG00000002016	EXOSC5	89	63.636	Microcebus_murinus
ENSHCOG00000017818	exosc5	98	59.574	ENSMOCG00000002379	Exosc5	97	59.574	Microtus_ochrogaster
ENSHCOG00000017818	exosc5	81	30.732	ENSMOCG00000020295	Exosc4	82	30.732	Microtus_ochrogaster
ENSHCOG00000017818	exosc5	94	83.482	ENSMMOG00000004799	exosc5	95	83.482	Mola_mola
ENSHCOG00000017818	exosc5	93	60.360	ENSMODG00000008642	EXOSC5	94	60.360	Monodelphis_domestica
ENSHCOG00000017818	exosc5	93	83.182	ENSMALG00000009453	exosc5	100	83.182	Monopterus_albus
ENSHCOG00000017818	exosc5	91	62.844	MGP_CAROLIEiJ_G0029376	Exosc5	93	62.844	Mus_caroli
ENSHCOG00000017818	exosc5	80	31.034	MGP_CAROLIEiJ_G0019919	Exosc4	82	31.034	Mus_caroli
ENSHCOG00000017818	exosc5	91	62.844	ENSMUSG00000061286	Exosc5	93	62.844	Mus_musculus
ENSHCOG00000017818	exosc5	80	31.034	ENSMUSG00000034259	Exosc4	82	31.034	Mus_musculus
ENSHCOG00000017818	exosc5	81	30.732	MGP_PahariEiJ_G0019929	Exosc4	82	30.732	Mus_pahari
ENSHCOG00000017818	exosc5	91	62.844	MGP_PahariEiJ_G0021229	Exosc5	93	62.844	Mus_pahari
ENSHCOG00000017818	exosc5	91	62.844	MGP_SPRETEiJ_G0030472	Exosc5	93	62.844	Mus_spretus
ENSHCOG00000017818	exosc5	80	31.034	MGP_SPRETEiJ_G0020822	Exosc4	82	31.034	Mus_spretus
ENSHCOG00000017818	exosc5	88	63.636	ENSMPUG00000017649	EXOSC5	89	63.636	Mustela_putorius_furo
ENSHCOG00000017818	exosc5	95	60.000	ENSMLUG00000013104	EXOSC5	96	60.000	Myotis_lucifugus
ENSHCOG00000017818	exosc5	88	64.115	ENSNGAG00000005929	Exosc5	89	64.115	Nannospalax_galili
ENSHCOG00000017818	exosc5	92	81.735	ENSNBRG00000004340	exosc5	100	81.735	Neolamprologus_brichardi
ENSHCOG00000017818	exosc5	88	63.636	ENSNLEG00000013696	EXOSC5	89	63.636	Nomascus_leucogenys
ENSHCOG00000017818	exosc5	88	48.325	ENSMEUG00000010485	EXOSC5	90	48.325	Notamacropus_eugenii
ENSHCOG00000017818	exosc5	88	43.458	ENSODEG00000000427	EXOSC5	87	43.925	Octodon_degus
ENSHCOG00000017818	exosc5	92	82.192	ENSONIG00000004023	exosc5	94	82.192	Oreochromis_niloticus
ENSHCOG00000017818	exosc5	80	31.034	ENSOCUG00000021243	EXOSC4	82	31.034	Oryctolagus_cuniculus
ENSHCOG00000017818	exosc5	88	62.679	ENSOCUG00000011497	EXOSC5	89	62.679	Oryctolagus_cuniculus
ENSHCOG00000017818	exosc5	92	80.822	ENSORLG00000023035	exosc5	100	80.822	Oryzias_latipes
ENSHCOG00000017818	exosc5	92	80.822	ENSORLG00020017279	exosc5	100	80.822	Oryzias_latipes_hni
ENSHCOG00000017818	exosc5	92	80.822	ENSORLG00015001719	exosc5	100	80.822	Oryzias_latipes_hsok
ENSHCOG00000017818	exosc5	92	79.452	ENSOMEG00000021763	exosc5	100	79.452	Oryzias_melastigma
ENSHCOG00000017818	exosc5	88	64.115	ENSOGAG00000016075	EXOSC5	89	64.115	Otolemur_garnettii
ENSHCOG00000017818	exosc5	88	63.158	ENSOARG00000007412	EXOSC5	89	63.158	Ovis_aries
ENSHCOG00000017818	exosc5	88	64.115	ENSPPAG00000024210	EXOSC5	89	64.115	Pan_paniscus
ENSHCOG00000017818	exosc5	88	63.636	ENSPPRG00000003713	EXOSC5	89	63.636	Panthera_pardus
ENSHCOG00000017818	exosc5	88	63.636	ENSPTIG00000015884	EXOSC5	89	63.636	Panthera_tigris_altaica
ENSHCOG00000017818	exosc5	88	64.115	ENSPTRG00000011024	EXOSC5	89	64.115	Pan_troglodytes
ENSHCOG00000017818	exosc5	91	63.134	ENSPANG00000004945	EXOSC5	92	63.134	Papio_anubis
ENSHCOG00000017818	exosc5	96	71.366	ENSPKIG00000013092	exosc5	98	71.366	Paramormyrops_kingsleyae
ENSHCOG00000017818	exosc5	71	30.939	ENSPKIG00000018362	exosc4	73	30.939	Paramormyrops_kingsleyae
ENSHCOG00000017818	exosc5	92	78.995	ENSPMGG00000015323	exosc5	98	78.995	Periophthalmus_magnuspinnatus
ENSHCOG00000017818	exosc5	88	63.636	ENSPEMG00000018589	Exosc5	89	63.636	Peromyscus_maniculatus_bairdii
ENSHCOG00000017818	exosc5	81	30.732	ENSPEMG00000017031	Exosc4	82	30.732	Peromyscus_maniculatus_bairdii
ENSHCOG00000017818	exosc5	81	30.732	ENSPCIG00000009102	EXOSC4	82	30.732	Phascolarctos_cinereus
ENSHCOG00000017818	exosc5	88	62.201	ENSPCIG00000016745	EXOSC5	94	62.201	Phascolarctos_cinereus
ENSHCOG00000017818	exosc5	92	78.636	ENSPFOG00000014158	exosc5	100	78.636	Poecilia_formosa
ENSHCOG00000017818	exosc5	94	81.081	ENSPLAG00000005701	exosc5	86	81.081	Poecilia_latipinna
ENSHCOG00000017818	exosc5	95	79.556	ENSPMEG00000020815	exosc5	96	78.571	Poecilia_mexicana
ENSHCOG00000017818	exosc5	95	78.667	ENSPREG00000017723	exosc5	95	78.667	Poecilia_reticulata
ENSHCOG00000017818	exosc5	78	62.366	ENSPPYG00000010016	-	99	62.366	Pongo_abelii
ENSHCOG00000017818	exosc5	88	56.938	ENSPCAG00000005946	EXOSC5	89	56.938	Procavia_capensis
ENSHCOG00000017818	exosc5	81	30.244	ENSPCOG00000020992	EXOSC4	82	30.244	Propithecus_coquereli
ENSHCOG00000017818	exosc5	88	63.636	ENSPCOG00000020582	EXOSC5	89	63.636	Propithecus_coquereli
ENSHCOG00000017818	exosc5	88	47.847	ENSPVAG00000013083	EXOSC5	86	47.847	Pteropus_vampyrus
ENSHCOG00000017818	exosc5	92	81.279	ENSPNYG00000007712	exosc5	94	81.279	Pundamilia_nyererei
ENSHCOG00000017818	exosc5	87	78.744	ENSPNAG00000030099	exosc5	95	78.744	Pygocentrus_nattereri
ENSHCOG00000017818	exosc5	91	62.385	ENSRNOG00000020635	Exosc5	93	62.385	Rattus_norvegicus
ENSHCOG00000017818	exosc5	81	30.732	ENSRNOG00000012348	Exosc4	82	30.732	Rattus_norvegicus
ENSHCOG00000017818	exosc5	91	63.134	ENSRBIG00000040585	EXOSC5	83	63.134	Rhinopithecus_bieti
ENSHCOG00000017818	exosc5	91	63.134	ENSRROG00000044020	EXOSC5	83	63.134	Rhinopithecus_roxellana
ENSHCOG00000017818	exosc5	88	55.981	ENSSBOG00000031753	EXOSC5	87	55.981	Saimiri_boliviensis_boliviensis
ENSHCOG00000017818	exosc5	81	30.732	ENSSHAG00000005397	EXOSC4	82	30.732	Sarcophilus_harrisii
ENSHCOG00000017818	exosc5	95	75.556	ENSSFOG00015022999	exosc5	99	75.556	Scleropages_formosus
ENSHCOG00000017818	exosc5	70	30.556	ENSSFOG00015004133	exosc4	72	30.556	Scleropages_formosus
ENSHCOG00000017818	exosc5	59	30.000	ENSSFOG00015011830	exosc6	63	30.000	Scleropages_formosus
ENSHCOG00000017818	exosc5	99	78.298	ENSSMAG00000020240	exosc5	98	78.298	Scophthalmus_maximus
ENSHCOG00000017818	exosc5	93	83.710	ENSSDUG00000000339	exosc5	86	83.710	Seriola_dumerili
ENSHCOG00000017818	exosc5	93	83.710	ENSSLDG00000005218	exosc5	86	83.710	Seriola_lalandi_dorsalis
ENSHCOG00000017818	exosc5	88	48.325	ENSSARG00000010083	-	90	48.325	Sorex_araneus
ENSHCOG00000017818	exosc5	92	82.192	ENSSPAG00000018306	exosc5	99	82.192	Stegastes_partitus
ENSHCOG00000017818	exosc5	78	62.500	ENSSSCG00000003015	EXOSC5	100	59.794	Sus_scrofa
ENSHCOG00000017818	exosc5	81	62.304	ENSTGUG00000014136	EXOSC5	98	62.304	Taeniopygia_guttata
ENSHCOG00000017818	exosc5	92	81.279	ENSTRUG00000009689	exosc5	100	81.279	Takifugu_rubripes
ENSHCOG00000017818	exosc5	92	73.661	ENSTNIG00000000238	exosc5	100	73.661	Tetraodon_nigroviridis
ENSHCOG00000017818	exosc5	86	61.463	ENSTBEG00000007203	EXOSC5	100	61.463	Tupaia_belangeri
ENSHCOG00000017818	exosc5	88	63.636	ENSTTRG00000012863	EXOSC5	89	63.636	Tursiops_truncatus
ENSHCOG00000017818	exosc5	88	50.239	ENSUAMG00000010104	EXOSC5	87	50.239	Ursus_americanus
ENSHCOG00000017818	exosc5	76	63.333	ENSUMAG00000005660	EXOSC5	81	63.333	Ursus_maritimus
ENSHCOG00000017818	exosc5	88	64.115	ENSVVUG00000005320	EXOSC5	89	64.115	Vulpes_vulpes
ENSHCOG00000017818	exosc5	88	62.981	ENSXETG00000018752	exosc5	92	62.981	Xenopus_tropicalis
ENSHCOG00000017818	exosc5	97	78.112	ENSXCOG00000012487	exosc5	99	78.112	Xiphophorus_couchianus
ENSHCOG00000017818	exosc5	89	80.952	ENSXMAG00000004786	exosc5	71	80.952	Xiphophorus_maculatus