EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000017868 (Gene tree)
Gene ID: 109528247
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 12626 bases
Position: chrKV880338.1:7294059-7306684
Accession: 109528247
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000014483	KH_1	PF00013.29	1.6e-54	1	3
ENSHCOP00000014483	KH_1	PF00013.29	1.6e-54	2	3
ENSHCOP00000014483	KH_1	PF00013.29	1.6e-54	3	3
ENSHCOP00000014487	KH_1	PF00013.29	1.6e-54	1	3
ENSHCOP00000014487	KH_1	PF00013.29	1.6e-54	2	3
ENSHCOP00000014487	KH_1	PF00013.29	1.6e-54	3	3
ENSHCOP00000014483	KH_2	PF07650.17	4.7e-14	1	1
ENSHCOP00000014487	KH_2	PF07650.17	4.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000022127	-	1546	XM_019890623	ENSHCOP00000014487	350 (aa)	XP_019746182	UPI000293AEF6
ENSHCOT00000022112	-	1449	XM_019890622	ENSHCOP00000014483	350 (aa)	XP_019746181	UPI000293AEF6

Gene Model

Click here to download ENSHCOG00000017868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000017868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000017868	pcbp3	93	60.923	ENSHCOG00000010838	-	65	69.737
ENSHCOG00000017868	pcbp3	95	86.228	ENSHCOG00000006067	-	97	86.228
ENSHCOG00000017868	pcbp3	64	35.802	ENSHCOG00000000910	fubp1	53	35.802
ENSHCOG00000017868	pcbp3	94	72.424	ENSHCOG00000020951	PCBP2	96	72.424
ENSHCOG00000017868	pcbp3	73	53.968	ENSHCOG00000011097	hnrnpk	58	53.968
ENSHCOG00000017868	pcbp3	65	36.923	ENSHCOG00000003639	FUBP3	58	36.923
ENSHCOG00000017868	pcbp3	94	67.273	ENSHCOG00000019886	pcbp2	96	67.273
ENSHCOG00000017868	pcbp3	81	35.294	ENSHCOG00000019870	hnrpkl	90	34.731
ENSHCOG00000017868	pcbp3	94	61.702	ENSHCOG00000000818	zgc:110045	96	66.667
ENSHCOG00000017868	pcbp3	64	42.188	ENSHCOG00000020488	khsrp	55	42.188

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000017868	pcbp3	95	90.120	ENSAPOG00000020003	pcbp3	86	90.120	Acanthochromis_polyacanthus
ENSHCOG00000017868	pcbp3	100	90.883	ENSAPOG00000016582	-	100	90.883	Acanthochromis_polyacanthus
ENSHCOG00000017868	pcbp3	93	87.537	ENSAMEG00000001697	-	96	87.537	Ailuropoda_melanoleuca
ENSHCOG00000017868	pcbp3	95	88.657	ENSACIG00000002739	-	97	88.657	Amphilophus_citrinellus
ENSHCOG00000017868	pcbp3	100	96.581	ENSACIG00000010933	pcbp3	100	96.581	Amphilophus_citrinellus
ENSHCOG00000017868	pcbp3	97	90.909	ENSAOCG00000008592	-	100	90.909	Amphiprion_ocellaris
ENSHCOG00000017868	pcbp3	91	85.902	ENSAOCG00000007806	-	97	85.902	Amphiprion_ocellaris
ENSHCOG00000017868	pcbp3	95	88.060	ENSAPEG00000005209	-	97	88.060	Amphiprion_percula
ENSHCOG00000017868	pcbp3	100	99.432	ENSAPEG00000008011	pcbp3	100	99.432	Amphiprion_percula
ENSHCOG00000017868	pcbp3	95	87.761	ENSATEG00000009833	-	97	87.761	Anabas_testudineus
ENSHCOG00000017868	pcbp3	95	97.006	ENSATEG00000015787	-	100	97.006	Anabas_testudineus
ENSHCOG00000017868	pcbp3	93	85.630	ENSAPLG00000002975	-	95	85.630	Anas_platyrhynchos
ENSHCOG00000017868	pcbp3	98	77.717	ENSAPLG00000008951	-	82	77.717	Anas_platyrhynchos
ENSHCOG00000017868	pcbp3	93	86.850	ENSACAG00000009819	-	95	86.850	Anolis_carolinensis
ENSHCOG00000017868	pcbp3	93	90.778	ENSACAG00000004607	-	96	90.778	Anolis_carolinensis
ENSHCOG00000017868	pcbp3	91	87.778	ENSANAG00000030702	-	96	87.778	Aotus_nancymaae
ENSHCOG00000017868	pcbp3	100	90.313	ENSACLG00000003801	-	100	90.313	Astatotilapia_calliptera
ENSHCOG00000017868	pcbp3	100	98.580	ENSACLG00000011835	pcbp3	100	98.580	Astatotilapia_calliptera
ENSHCOG00000017868	pcbp3	95	85.886	ENSAMXG00000013588	-	100	85.886	Astyanax_mexicanus
ENSHCOG00000017868	pcbp3	100	96.866	ENSAMXG00000003440	pcbp3	100	96.866	Astyanax_mexicanus
ENSHCOG00000017868	pcbp3	94	64.571	ENSAMXG00000001760	zgc:110045	73	64.571	Astyanax_mexicanus
ENSHCOG00000017868	pcbp3	90	84.151	ENSCAFG00020019472	-	86	84.151	Canis_lupus_dingo
ENSHCOG00000017868	pcbp3	93	88.720	ENSCSAG00000007440	-	87	88.720	Chlorocebus_sabaeus
ENSHCOG00000017868	pcbp3	98	85.465	ENSCPBG00000012151	-	95	85.465	Chrysemys_picta_bellii
ENSHCOG00000017868	pcbp3	98	87.204	ENSCPBG00000000733	-	72	87.204	Chrysemys_picta_bellii
ENSHCOG00000017868	pcbp3	95	72.222	ENSCSEG00000016984	-	99	77.559	Cynoglossus_semilaevis
ENSHCOG00000017868	pcbp3	95	88.323	ENSCSEG00000000822	pcbp3	99	88.323	Cynoglossus_semilaevis
ENSHCOG00000017868	pcbp3	100	90.313	ENSCVAG00000005262	-	100	90.313	Cyprinodon_variegatus
ENSHCOG00000017868	pcbp3	100	99.715	ENSCVAG00000014482	pcbp3	100	99.715	Cyprinodon_variegatus
ENSHCOG00000017868	pcbp3	100	97.151	ENSDARG00000054378	pcbp3	100	97.151	Danio_rerio
ENSHCOG00000017868	pcbp3	93	75.305	ENSETEG00000015988	-	95	75.305	Echinops_telfairi
ENSHCOG00000017868	pcbp3	91	69.310	ENSEBUG00000016192	pcbp3	99	69.310	Eptatretus_burgeri
ENSHCOG00000017868	pcbp3	71	67.742	ENSEBUG00000005495	pcbp3	68	67.742	Eptatretus_burgeri
ENSHCOG00000017868	pcbp3	95	74.481	ENSEBUG00000007485	-	92	73.967	Eptatretus_burgeri
ENSHCOG00000017868	pcbp3	100	98.017	ENSELUG00000003521	pcbp3	100	98.017	Esox_lucius
ENSHCOG00000017868	pcbp3	100	90.598	ENSELUG00000001560	-	100	83.149	Esox_lucius
ENSHCOG00000017868	pcbp3	98	77.989	ENSFALG00000004411	-	77	77.989	Ficedula_albicollis
ENSHCOG00000017868	pcbp3	93	88.991	ENSFALG00000003949	-	95	88.991	Ficedula_albicollis
ENSHCOG00000017868	pcbp3	97	88.824	ENSFHEG00000016615	pcbp3	97	88.824	Fundulus_heteroclitus
ENSHCOG00000017868	pcbp3	95	87.463	ENSFHEG00000006539	-	97	87.463	Fundulus_heteroclitus
ENSHCOG00000017868	pcbp3	95	76.620	ENSGMOG00000011992	pcbp3	96	76.685	Gadus_morhua
ENSHCOG00000017868	pcbp3	95	67.330	ENSGMOG00000008611	-	100	67.330	Gadus_morhua
ENSHCOG00000017868	pcbp3	93	88.439	ENSGALG00000004394	-	96	88.439	Gallus_gallus
ENSHCOG00000017868	pcbp3	93	87.077	ENSGALG00000013155	-	98	84.098	Gallus_gallus
ENSHCOG00000017868	pcbp3	100	90.313	ENSGAFG00000010274	-	100	90.313	Gambusia_affinis
ENSHCOG00000017868	pcbp3	95	95.210	ENSGAFG00000011430	pcbp3	96	95.210	Gambusia_affinis
ENSHCOG00000017868	pcbp3	96	84.181	ENSGACG00000002266	-	97	84.181	Gasterosteus_aculeatus
ENSHCOG00000017868	pcbp3	95	84.091	ENSGACG00000014955	-	97	84.091	Gasterosteus_aculeatus
ENSHCOG00000017868	pcbp3	82	82.479	ENSGAGG00000006956	-	93	82.479	Gopherus_agassizii
ENSHCOG00000017868	pcbp3	94	81.226	ENSGAGG00000000271	-	100	81.379	Gopherus_agassizii
ENSHCOG00000017868	pcbp3	100	99.145	ENSHBUG00000010697	pcbp3	100	99.145	Haplochromis_burtoni
ENSHCOG00000017868	pcbp3	100	90.313	ENSHBUG00000021782	-	100	90.313	Haplochromis_burtoni
ENSHCOG00000017868	pcbp3	95	95.821	ENSIPUG00000006238	pcbp3	97	95.821	Ictalurus_punctatus
ENSHCOG00000017868	pcbp3	100	89.459	ENSKMAG00000018530	-	100	89.459	Kryptolebias_marmoratus
ENSHCOG00000017868	pcbp3	100	99.148	ENSKMAG00000003046	pcbp3	100	99.148	Kryptolebias_marmoratus
ENSHCOG00000017868	pcbp3	100	79.143	ENSLBEG00000006542	-	100	79.714	Labrus_bergylta
ENSHCOG00000017868	pcbp3	96	89.021	ENSLBEG00000006201	pcbp3	96	89.021	Labrus_bergylta
ENSHCOG00000017868	pcbp3	98	77.808	ENSLACG00000010804	zgc:110045	77	77.808	Latimeria_chalumnae
ENSHCOG00000017868	pcbp3	97	85.714	ENSLACG00000010386	pcbp3	77	85.714	Latimeria_chalumnae
ENSHCOG00000017868	pcbp3	93	86.239	ENSLOCG00000005058	zgc:110045	80	86.239	Lepisosteus_oculatus
ENSHCOG00000017868	pcbp3	93	95.732	ENSLOCG00000009369	pcbp3	96	95.732	Lepisosteus_oculatus
ENSHCOG00000017868	pcbp3	95	86.567	ENSMAMG00000011620	-	97	86.567	Mastacembelus_armatus
ENSHCOG00000017868	pcbp3	95	90.390	ENSMAMG00000022336	pcbp3	93	90.390	Mastacembelus_armatus
ENSHCOG00000017868	pcbp3	100	96.296	ENSMZEG00005008993	pcbp3	100	96.296	Maylandia_zebra
ENSHCOG00000017868	pcbp3	100	87.143	ENSMZEG00005014882	-	100	87.252	Maylandia_zebra
ENSHCOG00000017868	pcbp3	98	77.989	ENSMGAG00000006794	-	77	77.989	Meleagris_gallopavo
ENSHCOG00000017868	pcbp3	94	80.172	ENSMGAG00000001883	-	96	80.172	Meleagris_gallopavo
ENSHCOG00000017868	pcbp3	95	89.552	ENSMMOG00000000730	pcbp3	88	89.552	Mola_mola
ENSHCOG00000017868	pcbp3	95	87.164	ENSMMOG00000005216	-	97	87.164	Mola_mola
ENSHCOG00000017868	pcbp3	71	85.981	ENSMODG00000027884	-	93	85.981	Monodelphis_domestica
ENSHCOG00000017868	pcbp3	100	97.151	ENSMALG00000000691	pcbp3	100	97.151	Monopterus_albus
ENSHCOG00000017868	pcbp3	93	78.613	ENSMPUG00000001779	-	88	78.613	Mustela_putorius_furo
ENSHCOG00000017868	pcbp3	100	96.857	ENSNBRG00000016409	-	100	96.857	Neolamprologus_brichardi
ENSHCOG00000017868	pcbp3	100	89.356	ENSNBRG00000016714	-	100	89.356	Neolamprologus_brichardi
ENSHCOG00000017868	pcbp3	93	88.081	ENSOPRG00000003431	-	99	88.081	Ochotona_princeps
ENSHCOG00000017868	pcbp3	95	89.552	ENSONIG00000004611	-	97	89.552	Oreochromis_niloticus
ENSHCOG00000017868	pcbp3	95	94.318	ENSONIG00000012122	-	98	94.318	Oreochromis_niloticus
ENSHCOG00000017868	pcbp3	93	88.685	ENSOCUG00000002696	-	87	88.685	Oryctolagus_cuniculus
ENSHCOG00000017868	pcbp3	95	92.515	ENSORLG00000000059	pcbp3	100	92.515	Oryzias_latipes
ENSHCOG00000017868	pcbp3	99	89.714	ENSORLG00000022739	-	99	89.714	Oryzias_latipes
ENSHCOG00000017868	pcbp3	95	92.515	ENSORLG00020012671	pcbp3	97	92.515	Oryzias_latipes_hni
ENSHCOG00000017868	pcbp3	99	89.429	ENSORLG00020006124	-	99	89.429	Oryzias_latipes_hni
ENSHCOG00000017868	pcbp3	95	92.515	ENSORLG00015000429	pcbp3	97	92.515	Oryzias_latipes_hsok
ENSHCOG00000017868	pcbp3	99	89.714	ENSORLG00015008051	-	99	89.714	Oryzias_latipes_hsok
ENSHCOG00000017868	pcbp3	91	90.492	ENSOMEG00000020811	pcbp3	97	90.492	Oryzias_melastigma
ENSHCOG00000017868	pcbp3	95	89.254	ENSOMEG00000020162	-	97	89.254	Oryzias_melastigma
ENSHCOG00000017868	pcbp3	93	82.720	ENSOGAG00000008044	-	96	82.720	Otolemur_garnettii
ENSHCOG00000017868	pcbp3	76	79.524	ENSPKIG00000020913	-	91	79.524	Paramormyrops_kingsleyae
ENSHCOG00000017868	pcbp3	100	90.286	ENSPKIG00000019329	pcbp3	100	90.286	Paramormyrops_kingsleyae
ENSHCOG00000017868	pcbp3	94	81.226	ENSPSIG00000008350	-	72	81.226	Pelodiscus_sinensis
ENSHCOG00000017868	pcbp3	93	76.744	ENSPSIG00000014970	-	95	77.326	Pelodiscus_sinensis
ENSHCOG00000017868	pcbp3	100	98.575	ENSPMGG00000022383	pcbp3	100	98.575	Periophthalmus_magnuspinnatus
ENSHCOG00000017868	pcbp3	95	69.048	ENSPMAG00000004551	pcbp3	90	69.048	Petromyzon_marinus
ENSHCOG00000017868	pcbp3	76	89.362	ENSPMAG00000004637	-	97	89.362	Petromyzon_marinus
ENSHCOG00000017868	pcbp3	93	95.427	ENSPCIG00000028092	-	96	95.427	Phascolarctos_cinereus
ENSHCOG00000017868	pcbp3	100	84.211	ENSPLAG00000011449	pcbp3	100	84.211	Poecilia_latipinna
ENSHCOG00000017868	pcbp3	94	84.795	ENSPLAG00000004074	-	89	84.795	Poecilia_latipinna
ENSHCOG00000017868	pcbp3	100	88.571	ENSPMEG00000006653	-	100	88.571	Poecilia_mexicana
ENSHCOG00000017868	pcbp3	100	98.588	ENSPMEG00000021239	pcbp3	100	98.588	Poecilia_mexicana
ENSHCOG00000017868	pcbp3	95	87.164	ENSPREG00000020585	-	97	87.164	Poecilia_reticulata
ENSHCOG00000017868	pcbp3	95	88.095	ENSPREG00000015736	pcbp3	99	88.095	Poecilia_reticulata
ENSHCOG00000017868	pcbp3	95	87.164	ENSPNYG00000013205	-	97	87.164	Pundamilia_nyererei
ENSHCOG00000017868	pcbp3	95	89.820	ENSPNYG00000012326	pcbp3	95	89.820	Pundamilia_nyererei
ENSHCOG00000017868	pcbp3	95	90.149	ENSPNAG00000015104	pcbp3	97	90.149	Pygocentrus_nattereri
ENSHCOG00000017868	pcbp3	100	94.587	ENSPNAG00000008541	-	100	94.587	Pygocentrus_nattereri
ENSHCOG00000017868	pcbp3	93	88.720	ENSRNOG00000001245	Pcbp3	95	88.720	Rattus_norvegicus
ENSHCOG00000017868	pcbp3	93	79.888	ENSRBIG00000028177	-	96	79.888	Rhinopithecus_bieti
ENSHCOG00000017868	pcbp3	93	84.857	ENSSHAG00000007890	-	96	84.104	Sarcophilus_harrisii
ENSHCOG00000017868	pcbp3	100	90.857	ENSSFOG00015010205	pcbp3	100	94.895	Scleropages_formosus
ENSHCOG00000017868	pcbp3	100	95.143	ENSSFOG00015014706	pcbp3	100	95.143	Scleropages_formosus
ENSHCOG00000017868	pcbp3	93	78.769	ENSSFOG00015007118	-	93	78.769	Scleropages_formosus
ENSHCOG00000017868	pcbp3	100	90.028	ENSSMAG00000003135	-	100	90.028	Scophthalmus_maximus
ENSHCOG00000017868	pcbp3	95	90.120	ENSSMAG00000011929	pcbp3	97	90.120	Scophthalmus_maximus
ENSHCOG00000017868	pcbp3	100	89.429	ENSSDUG00000008502	-	100	89.429	Seriola_dumerili
ENSHCOG00000017868	pcbp3	95	97.305	ENSSDUG00000011608	pcbp3	99	97.305	Seriola_dumerili
ENSHCOG00000017868	pcbp3	100	90.883	ENSSLDG00000020161	-	100	90.883	Seriola_lalandi_dorsalis
ENSHCOG00000017868	pcbp3	95	97.305	ENSSLDG00000008518	pcbp3	99	97.305	Seriola_lalandi_dorsalis
ENSHCOG00000017868	pcbp3	91	85.467	ENSSPUG00000013214	-	91	85.467	Sphenodon_punctatus
ENSHCOG00000017868	pcbp3	91	85.902	ENSSPAG00000004190	-	97	85.902	Stegastes_partitus
ENSHCOG00000017868	pcbp3	100	86.325	ENSSPAG00000023341	-	100	86.325	Stegastes_partitus
ENSHCOG00000017868	pcbp3	93	82.927	ENSTGUG00000008158	-	96	82.927	Taeniopygia_guttata
ENSHCOG00000017868	pcbp3	93	80.980	ENSTGUG00000003316	-	96	80.980	Taeniopygia_guttata
ENSHCOG00000017868	pcbp3	100	92.877	ENSTRUG00000013604	pcbp3	100	92.877	Takifugu_rubripes
ENSHCOG00000017868	pcbp3	91	89.073	ENSTRUG00000006280	-	89	89.073	Takifugu_rubripes
ENSHCOG00000017868	pcbp3	93	88.728	ENSTTRG00000015075	-	96	88.728	Tursiops_truncatus
ENSHCOG00000017868	pcbp3	93	82.997	ENSXETG00000011483	pcbp1	96	82.997	Xenopus_tropicalis
ENSHCOG00000017868	pcbp3	95	76.771	ENSXETG00000010491	pcbp2	77	76.771	Xenopus_tropicalis
ENSHCOG00000017868	pcbp3	100	98.588	ENSXCOG00000020481	pcbp3	100	98.588	Xiphophorus_couchianus
ENSHCOG00000017868	pcbp3	100	90.598	ENSXMAG00000028711	-	100	90.598	Xiphophorus_maculatus
ENSHCOG00000017868	pcbp3	100	99.432	ENSXMAG00000008175	pcbp3	100	99.432	Xiphophorus_maculatus