EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000018058 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 1472 bases
Position: chrLVHJ01058646.1:357-1828
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000014626	RRM_1	PF00076.22	5.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027754	-	342	-	ENSHCOP00000014626	113 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000018058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000018058's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000018058	-	64	43.056	ENSHCOG00000008598	-	56	43.056
ENSHCOG00000018058	-	100	99.115	ENSHCOG00000006314	tra2a	57	99.115
ENSHCOG00000018058	-	65	46.575	ENSHCOG00000001170	cirbpa	65	44.304

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000018058	-	99	76.786	ENSG00000164548	TRA2A	61	78.182	Homo_sapiens
ENSHCOG00000018058	-	99	78.571	ENSAPOG00000017425	tra2a	55	80.000	Acanthochromis_polyacanthus
ENSHCOG00000018058	-	99	78.571	ENSACIG00000001333	tra2a	60	80.000	Amphilophus_citrinellus
ENSHCOG00000018058	-	99	77.679	ENSAPEG00000018557	tra2a	58	79.091	Amphiprion_percula
ENSHCOG00000018058	-	99	76.786	ENSTSYG00000000388	TRA2A	61	78.182	Carlito_syrichta
ENSHCOG00000018058	-	99	76.786	ENSCCAG00000019576	TRA2A	61	78.182	Cebus_capucinus
ENSHCOG00000018058	-	99	76.786	ENSCATG00000041219	TRA2A	61	78.182	Cercocebus_atys
ENSHCOG00000018058	-	99	76.786	ENSCANG00000031292	TRA2A	61	78.182	Colobus_angolensis_palliatus
ENSHCOG00000018058	-	97	78.182	ENSCSEG00000012193	tra2a	55	78.182	Cynoglossus_semilaevis
ENSHCOG00000018058	-	88	79.798	ENSDARG00000007863	tra2a	50	79.798	Danio_rerio
ENSHCOG00000018058	-	99	76.786	ENSGGOG00000009053	TRA2A	61	78.182	Gorilla_gorilla
ENSHCOG00000018058	-	99	76.786	ENSMFAG00000043211	TRA2A	61	78.182	Macaca_fascicularis
ENSHCOG00000018058	-	99	76.786	ENSMMUG00000006286	TRA2A	58	82.828	Macaca_mulatta
ENSHCOG00000018058	-	99	76.786	ENSMNEG00000040670	TRA2A	61	78.182	Macaca_nemestrina
ENSHCOG00000018058	-	99	76.786	ENSMLEG00000032154	TRA2A	61	78.182	Mandrillus_leucophaeus
ENSHCOG00000018058	-	99	76.786	ENSMICG00000043639	-	61	78.182	Microcebus_murinus
ENSHCOG00000018058	-	87	71.000	ENSMOCG00000006467	-	52	71.000	Microtus_ochrogaster
ENSHCOG00000018058	-	99	78.571	ENSNBRG00000005992	tra2a	53	80.000	Neolamprologus_brichardi
ENSHCOG00000018058	-	99	56.250	ENSNLEG00000029659	-	63	56.250	Nomascus_leucogenys
ENSHCOG00000018058	-	99	76.786	ENSNLEG00000014794	TRA2A	61	78.182	Nomascus_leucogenys
ENSHCOG00000018058	-	99	76.786	ENSPPAG00000034382	TRA2A	61	78.182	Pan_paniscus
ENSHCOG00000018058	-	99	76.786	ENSPTRG00000018988	TRA2A	61	78.182	Pan_troglodytes
ENSHCOG00000018058	-	99	78.571	ENSPNYG00000020134	tra2a	54	80.000	Pundamilia_nyererei
ENSHCOG00000018058	-	97	78.182	ENSRBIG00000036805	TRA2A	57	78.182	Rhinopithecus_bieti
ENSHCOG00000018058	-	99	76.786	ENSRROG00000030758	TRA2A	61	78.182	Rhinopithecus_roxellana
ENSHCOG00000018058	-	99	76.786	ENSSBOG00000031562	TRA2A	61	78.182	Saimiri_boliviensis_boliviensis
ENSHCOG00000018058	-	99	77.679	ENSSLDG00000025577	tra2a	59	79.091	Seriola_lalandi_dorsalis
ENSHCOG00000018058	-	99	76.786	ENSUMAG00000001181	TRA2A	58	76.786	Ursus_maritimus