EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000018086 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 21803 bases
Position: chrKV879831.1:1106092-1127894
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000026805	zf-met	PF12874.7	5.7e-15	1	2
ENSHCOP00000026805	zf-met	PF12874.7	5.7e-15	2	2
ENSHCOP00000026805	zf-C2H2_jaz	PF12171.8	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000022348	-	405	-	ENSHCOP00000026805	134 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000018086's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000018086's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000018086	zgc:171482	99	65.152	ENSHCOG00000006516	zmat4b	100	65.152

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000018086	zgc:171482	94	89.683	ENSAPOG00000019970	zgc:171482	79	89.683	Acanthochromis_polyacanthus
ENSHCOG00000018086	zgc:171482	90	90.909	ENSACIG00000021512	zgc:171482	90	90.909	Amphilophus_citrinellus
ENSHCOG00000018086	zgc:171482	98	87.023	ENSAOCG00000000751	zgc:171482	95	87.023	Amphiprion_ocellaris
ENSHCOG00000018086	zgc:171482	99	86.364	ENSAPEG00000014154	zgc:171482	94	86.364	Amphiprion_percula
ENSHCOG00000018086	zgc:171482	86	93.043	ENSATEG00000001371	zgc:171482	79	90.083	Anabas_testudineus
ENSHCOG00000018086	zgc:171482	97	88.462	ENSACLG00000010511	zgc:171482	89	88.462	Astatotilapia_calliptera
ENSHCOG00000018086	zgc:171482	86	91.304	ENSAMXG00000002299	zgc:171482	86	91.304	Astyanax_mexicanus
ENSHCOG00000018086	zgc:171482	90	88.430	ENSCSEG00000006509	zgc:171482	78	88.430	Cynoglossus_semilaevis
ENSHCOG00000018086	zgc:171482	90	90.909	ENSCVAG00000013606	zgc:171482	80	90.909	Cyprinodon_variegatus
ENSHCOG00000018086	zgc:171482	93	85.484	ENSDARG00000074415	zgc:171482	87	89.744	Danio_rerio
ENSHCOG00000018086	zgc:171482	90	70.248	ENSELUG00000017517	-	93	60.000	Esox_lucius
ENSHCOG00000018086	zgc:171482	100	82.836	ENSELUG00000021817	zgc:171482	96	82.836	Esox_lucius
ENSHCOG00000018086	zgc:171482	94	88.889	ENSFHEG00000002233	zgc:171482	89	88.889	Fundulus_heteroclitus
ENSHCOG00000018086	zgc:171482	94	88.889	ENSGMOG00000010508	zgc:171482	79	88.889	Gadus_morhua
ENSHCOG00000018086	zgc:171482	90	91.736	ENSGAFG00000009398	zgc:171482	78	91.736	Gambusia_affinis
ENSHCOG00000018086	zgc:171482	94	90.476	ENSGACG00000007680	zgc:171482	80	90.476	Gasterosteus_aculeatus
ENSHCOG00000018086	zgc:171482	99	87.879	ENSHBUG00000023289	zgc:171482	98	87.879	Haplochromis_burtoni
ENSHCOG00000018086	zgc:171482	87	91.453	ENSIPUG00000000361	zgc:171482	84	91.453	Ictalurus_punctatus
ENSHCOG00000018086	zgc:171482	94	89.683	ENSKMAG00000005077	zgc:171482	68	89.683	Kryptolebias_marmoratus
ENSHCOG00000018086	zgc:171482	94	88.889	ENSLBEG00000023823	zgc:171482	89	88.889	Labrus_bergylta
ENSHCOG00000018086	zgc:171482	88	88.983	ENSLOCG00000008863	zgc:171482	77	84.800	Lepisosteus_oculatus
ENSHCOG00000018086	zgc:171482	99	84.962	ENSMAMG00000001031	zgc:171482	78	88.889	Mastacembelus_armatus
ENSHCOG00000018086	zgc:171482	90	86.777	ENSMZEG00005027721	zgc:171482	79	86.777	Maylandia_zebra
ENSHCOG00000018086	zgc:171482	94	91.270	ENSMMOG00000010523	zgc:171482	95	91.270	Mola_mola
ENSHCOG00000018086	zgc:171482	90	92.500	ENSMALG00000017883	zgc:171482	80	92.500	Monopterus_albus
ENSHCOG00000018086	zgc:171482	96	86.822	ENSNBRG00000021035	zgc:171482	96	86.822	Neolamprologus_brichardi
ENSHCOG00000018086	zgc:171482	94	90.476	ENSONIG00000018365	zgc:171482	78	90.476	Oreochromis_niloticus
ENSHCOG00000018086	zgc:171482	86	93.913	ENSORLG00000007607	zgc:171482	87	89.683	Oryzias_latipes
ENSHCOG00000018086	zgc:171482	86	93.043	ENSORLG00020003563	zgc:171482	87	88.889	Oryzias_latipes_hni
ENSHCOG00000018086	zgc:171482	86	93.913	ENSORLG00015008552	zgc:171482	87	89.683	Oryzias_latipes_hsok
ENSHCOG00000018086	zgc:171482	94	90.476	ENSOMEG00000003526	zgc:171482	87	90.476	Oryzias_melastigma
ENSHCOG00000018086	zgc:171482	83	90.991	ENSPKIG00000016244	zgc:171482	81	89.474	Paramormyrops_kingsleyae
ENSHCOG00000018086	zgc:171482	87	89.744	ENSPKIG00000015911	-	81	89.744	Paramormyrops_kingsleyae
ENSHCOG00000018086	zgc:171482	93	87.500	ENSPMGG00000020230	zgc:171482	82	87.500	Periophthalmus_magnuspinnatus
ENSHCOG00000018086	zgc:171482	94	91.270	ENSPFOG00000001974	zgc:171482	78	91.270	Poecilia_formosa
ENSHCOG00000018086	zgc:171482	97	89.231	ENSPLAG00000003327	zgc:171482	79	89.231	Poecilia_latipinna
ENSHCOG00000018086	zgc:171482	94	91.270	ENSPMEG00000004988	zgc:171482	78	87.879	Poecilia_mexicana
ENSHCOG00000018086	zgc:171482	94	91.270	ENSPREG00000019241	zgc:171482	90	91.270	Poecilia_reticulata
ENSHCOG00000018086	zgc:171482	97	88.462	ENSPNYG00000007773	zgc:171482	89	88.462	Pundamilia_nyererei
ENSHCOG00000018086	zgc:171482	86	90.435	ENSPNAG00000007619	zgc:171482	79	85.600	Pygocentrus_nattereri
ENSHCOG00000018086	zgc:171482	97	82.222	ENSSFOG00015021238	zgc:171482	91	82.222	Scleropages_formosus
ENSHCOG00000018086	zgc:171482	87	87.179	ENSSFOG00015016149	zgc:171482	93	87.179	Scleropages_formosus
ENSHCOG00000018086	zgc:171482	94	89.683	ENSSMAG00000002715	zgc:171482	79	89.683	Scophthalmus_maximus
ENSHCOG00000018086	zgc:171482	98	88.550	ENSSDUG00000008773	zgc:171482	91	88.550	Seriola_dumerili
ENSHCOG00000018086	zgc:171482	98	88.550	ENSSLDG00000019510	zgc:171482	91	88.550	Seriola_lalandi_dorsalis
ENSHCOG00000018086	zgc:171482	96	88.281	ENSSPAG00000013724	zgc:171482	100	88.281	Stegastes_partitus
ENSHCOG00000018086	zgc:171482	89	90.756	ENSTRUG00000005705	zgc:171482	70	90.756	Takifugu_rubripes
ENSHCOG00000018086	zgc:171482	96	66.412	ENSTNIG00000008679	zgc:171482	80	66.412	Tetraodon_nigroviridis
ENSHCOG00000018086	zgc:171482	76	87.755	ENSXETG00000013525	zmat4	80	87.755	Xenopus_tropicalis
ENSHCOG00000018086	zgc:171482	90	82.645	ENSXMAG00000002641	zgc:171482	78	82.645	Xiphophorus_maculatus