EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000018388 (Gene tree)
Gene ID: 109519267
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing protein 1 homolog A-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 17907 bases
Position: chrKV880067.1:464358-482264
Accession: 109519267
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000026968	Nop52	PF05997.12	2.3e-57	1	2
ENSHCOP00000026968	Nop52	PF05997.12	2.3e-57	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000022642	-	3310	XM_019875686	ENSHCOP00000026968	883 (aa)	XP_019731245	-

Gene Model

Click here to download ENSHCOG00000018388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000018388's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000018388	-	60	47.656	ENSG00000160208	RRP1B	64	47.656	Homo_sapiens
ENSHCOG00000018388	-	71	61.235	ENSAPOG00000007490	-	62	60.880	Acanthochromis_polyacanthus
ENSHCOG00000018388	-	60	43.590	ENSAMEG00000011401	RRP1B	65	45.299	Ailuropoda_melanoleuca
ENSHCOG00000018388	-	57	67.568	ENSAOCG00000017894	-	99	72.527	Amphiprion_ocellaris
ENSHCOG00000018388	-	80	55.676	ENSAPEG00000024150	-	84	53.774	Amphiprion_percula
ENSHCOG00000018388	-	65	61.085	ENSATEG00000005045	-	66	55.948	Anabas_testudineus
ENSHCOG00000018388	-	57	43.750	ENSAPLG00000004310	RRP1B	69	43.351	Anas_platyrhynchos
ENSHCOG00000018388	-	62	45.238	ENSACAG00000017851	RRP1B	63	45.244	Anolis_carolinensis
ENSHCOG00000018388	-	60	46.875	ENSANAG00000034889	RRP1B	64	46.875	Aotus_nancymaae
ENSHCOG00000018388	-	53	39.423	ENSAMXG00000043138	-	53	39.566	Astyanax_mexicanus
ENSHCOG00000018388	-	61	42.254	ENSBTAG00000017418	RRP1B	67	42.254	Bos_taurus
ENSHCOG00000018388	-	60	45.312	ENSCJAG00000017077	RRP1B	64	47.656	Callithrix_jacchus
ENSHCOG00000018388	-	58	42.188	ENSCAFG00000010621	RRP1B	63	44.531	Canis_familiaris
ENSHCOG00000018388	-	62	42.188	ENSCAFG00020018901	RRP1B	66	44.531	Canis_lupus_dingo
ENSHCOG00000018388	-	62	43.919	ENSCHIG00000021519	RRP1B	67	43.919	Capra_hircus
ENSHCOG00000018388	-	59	42.029	ENSCPOG00000002396	RRP1B	68	43.478	Cavia_porcellus
ENSHCOG00000018388	-	60	46.875	ENSCCAG00000029384	RRP1B	64	46.875	Cebus_capucinus
ENSHCOG00000018388	-	54	39.167	ENSCCAG00000029828	RRP1	89	39.212	Cebus_capucinus
ENSHCOG00000018388	-	60	46.094	ENSCATG00000017423	RRP1B	64	46.094	Cercocebus_atys
ENSHCOG00000018388	-	60	46.479	ENSCLAG00000005622	RRP1B	70	46.479	Chinchilla_lanigera
ENSHCOG00000018388	-	60	47.656	ENSCSAG00000007961	RRP1B	64	47.656	Chlorocebus_sabaeus
ENSHCOG00000018388	-	60	47.656	ENSCANG00000040952	RRP1B	64	47.656	Colobus_angolensis_palliatus
ENSHCOG00000018388	-	60	43.972	ENSCGRG00001010889	-	68	43.972	Cricetulus_griseus_chok1gshd
ENSHCOG00000018388	-	60	43.972	ENSCGRG00001023882	-	60	57.353	Cricetulus_griseus_chok1gshd
ENSHCOG00000018388	-	57	43.972	ENSCGRG00000001553	Rrp1b	65	43.972	Cricetulus_griseus_crigri
ENSHCOG00000018388	-	57	59.902	ENSCSEG00000020711	-	80	59.902	Cynoglossus_semilaevis
ENSHCOG00000018388	-	57	45.855	ENSDARG00000103337	rrp1	63	45.906	Danio_rerio
ENSHCOG00000018388	-	58	36.138	ENSDNOG00000019880	RRP1	82	40.482	Dasypus_novemcinctus
ENSHCOG00000018388	-	65	42.038	ENSDNOG00000032774	RRP1B	68	42.038	Dasypus_novemcinctus
ENSHCOG00000018388	-	50	45.926	ENSDORG00000005496	Rrp1b	63	45.255	Dipodomys_ordii
ENSHCOG00000018388	-	59	47.312	ENSETEG00000019489	RRP1B	60	50.515	Echinops_telfairi
ENSHCOG00000018388	-	61	45.455	ENSEASG00005001687	RRP1B	66	45.455	Equus_asinus_asinus
ENSHCOG00000018388	-	61	45.455	ENSECAG00000018018	RRP1B	66	45.455	Equus_caballus
ENSHCOG00000018388	-	68	55.116	ENSELUG00000015885	-	93	51.157	Esox_lucius
ENSHCOG00000018388	-	60	45.736	ENSFCAG00000010272	RRP1B	66	47.287	Felis_catus
ENSHCOG00000018388	-	53	41.718	ENSFALG00000002024	RRP1B	63	42.899	Ficedula_albicollis
ENSHCOG00000018388	-	58	43.056	ENSFDAG00000010899	RRP1B	65	43.448	Fukomys_damarensis
ENSHCOG00000018388	-	51	37.832	ENSFDAG00000013728	RRP1	74	42.216	Fukomys_damarensis
ENSHCOG00000018388	-	63	59.200	ENSFHEG00000016314	-	61	59.200	Fundulus_heteroclitus
ENSHCOG00000018388	-	66	55.831	ENSGMOG00000001953	-	73	55.501	Gadus_morhua
ENSHCOG00000018388	-	71	57.598	ENSGACG00000001438	rrp1	79	60.000	Gasterosteus_aculeatus
ENSHCOG00000018388	-	60	47.656	ENSGGOG00000012069	RRP1B	64	47.656	Gorilla_gorilla
ENSHCOG00000018388	-	62	42.763	ENSHGLG00000004968	RRP1B	68	42.763	Heterocephalus_glaber_female
ENSHCOG00000018388	-	55	42.763	ENSHGLG00100002232	RRP1B	60	42.763	Heterocephalus_glaber_male
ENSHCOG00000018388	-	54	57.000	ENSIPUG00000000673	-	76	46.575	Ictalurus_punctatus
ENSHCOG00000018388	-	59	41.481	ENSSTOG00000011790	RRP1B	66	42.754	Ictidomys_tridecemlineatus
ENSHCOG00000018388	-	55	45.312	ENSJJAG00000021279	Rrp1b	67	45.312	Jaculus_jaculus
ENSHCOG00000018388	-	65	57.920	ENSKMAG00000005539	rrp1	82	57.920	Kryptolebias_marmoratus
ENSHCOG00000018388	-	60	44.048	ENSLACG00000017332	-	67	44.048	Latimeria_chalumnae
ENSHCOG00000018388	-	59	52.792	ENSLOCG00000004064	-	68	52.736	Lepisosteus_oculatus
ENSHCOG00000018388	-	50	44.275	ENSLAFG00000000766	RRP1B	86	41.076	Loxodonta_africana
ENSHCOG00000018388	-	60	46.875	ENSMFAG00000039152	RRP1B	64	46.875	Macaca_fascicularis
ENSHCOG00000018388	-	56	48.936	ENSMMUG00000000104	RRP1B	60	48.936	Macaca_mulatta
ENSHCOG00000018388	-	60	47.287	ENSMNEG00000034269	RRP1B	64	47.287	Macaca_nemestrina
ENSHCOG00000018388	-	55	46.875	ENSMLEG00000040044	RRP1B	61	46.875	Mandrillus_leucophaeus
ENSHCOG00000018388	-	71	61.111	ENSMAMG00000007131	-	55	64.604	Mastacembelus_armatus
ENSHCOG00000018388	-	57	44.366	ENSMAUG00000021508	Rrp1b	63	44.366	Mesocricetus_auratus
ENSHCOG00000018388	-	61	47.287	ENSMICG00000004686	RRP1B	67	47.287	Microcebus_murinus
ENSHCOG00000018388	-	58	43.704	ENSMOCG00000001117	Rrp1b	64	43.704	Microtus_ochrogaster
ENSHCOG00000018388	-	62	44.531	ENSMODG00000021033	RRP1B	66	44.961	Monodelphis_domestica
ENSHCOG00000018388	-	60	42.958	MGP_CAROLIEiJ_G0021376	Rrp1b	58	54.412	Mus_caroli
ENSHCOG00000018388	-	60	43.972	ENSMUSG00000058392	Rrp1b	94	43.972	Mus_musculus
ENSHCOG00000018388	-	60	43.262	MGP_PahariEiJ_G0023695	Rrp1b	58	54.412	Mus_pahari
ENSHCOG00000018388	-	60	43.972	MGP_SPRETEiJ_G0022290	Rrp1b	58	55.882	Mus_spretus
ENSHCOG00000018388	-	60	44.615	ENSMLUG00000007738	RRP1B	64	44.615	Myotis_lucifugus
ENSHCOG00000018388	-	65	46.358	ENSNGAG00000021073	Rrp1b	69	46.753	Nannospalax_galili
ENSHCOG00000018388	-	62	47.656	ENSNLEG00000001490	RRP1B	66	47.656	Nomascus_leucogenys
ENSHCOG00000018388	-	58	42.361	ENSODEG00000013177	RRP1B	66	42.361	Octodon_degus
ENSHCOG00000018388	-	57	66.667	ENSONIG00000004264	rrp1	60	66.667	Oreochromis_niloticus
ENSHCOG00000018388	-	53	41.379	ENSOCUG00000025931	RRP1B	63	41.379	Oryctolagus_cuniculus
ENSHCOG00000018388	-	67	55.660	ENSORLG00020007199	-	63	56.206	Oryzias_latipes_hni
ENSHCOG00000018388	-	56	63.736	ENSOMEG00000016910	-	63	56.127	Oryzias_melastigma
ENSHCOG00000018388	-	53	54.545	ENSOGAG00000009872	RRP1B	70	54.545	Otolemur_garnettii
ENSHCOG00000018388	-	52	47.115	ENSOARG00000011314	RRP1B	61	47.115	Ovis_aries
ENSHCOG00000018388	-	55	47.656	ENSPPAG00000035319	RRP1B	61	47.656	Pan_paniscus
ENSHCOG00000018388	-	60	43.939	ENSPPRG00000010356	RRP1B	66	45.455	Panthera_pardus
ENSHCOG00000018388	-	60	41.781	ENSPTIG00000016894	RRP1B	73	47.107	Panthera_tigris_altaica
ENSHCOG00000018388	-	60	47.656	ENSPTRG00000013958	RRP1B	64	47.656	Pan_troglodytes
ENSHCOG00000018388	-	60	46.094	ENSPANG00000011090	RRP1B	64	46.875	Papio_anubis
ENSHCOG00000018388	-	80	54.032	ENSPKIG00000003422	-	83	54.032	Paramormyrops_kingsleyae
ENSHCOG00000018388	-	60	47.500	ENSPSIG00000008152	RRP1B	61	47.761	Pelodiscus_sinensis
ENSHCOG00000018388	-	60	44.928	ENSPEMG00000022490	Rrp1b	68	45.324	Peromyscus_maniculatus_bairdii
ENSHCOG00000018388	-	56	37.205	ENSPCIG00000015523	-	79	40.952	Phascolarctos_cinereus
ENSHCOG00000018388	-	58	48.387	ENSPCIG00000015513	RRP1B	65	48.387	Phascolarctos_cinereus
ENSHCOG00000018388	-	72	58.111	ENSPFOG00000007424	-	69	58.596	Poecilia_formosa
ENSHCOG00000018388	-	60	47.656	ENSPPYG00000011470	RRP1B	64	47.656	Pongo_abelii
ENSHCOG00000018388	-	51	42.484	ENSPCAG00000013723	RRP1B	54	44.275	Procavia_capensis
ENSHCOG00000018388	-	64	45.752	ENSPCOG00000017927	RRP1B	71	45.752	Propithecus_coquereli
ENSHCOG00000018388	-	64	40.972	ENSPVAG00000001436	RRP1B	66	40.278	Pteropus_vampyrus
ENSHCOG00000018388	-	56	46.875	ENSRBIG00000041689	RRP1B	63	46.875	Rhinopithecus_bieti
ENSHCOG00000018388	-	60	46.875	ENSRROG00000031499	RRP1B	64	46.875	Rhinopithecus_roxellana
ENSHCOG00000018388	-	52	40.000	ENSSBOG00000034689	RRP1	80	42.143	Saimiri_boliviensis_boliviensis
ENSHCOG00000018388	-	55	46.875	ENSSBOG00000034727	RRP1B	62	46.875	Saimiri_boliviensis_boliviensis
ENSHCOG00000018388	-	62	44.961	ENSSHAG00000017789	RRP1B	65	44.961	Sarcophilus_harrisii
ENSHCOG00000018388	-	76	66.187	ENSSMAG00000016847	-	88	63.747	Scophthalmus_maximus
ENSHCOG00000018388	-	52	41.606	ENSSARG00000003108	-	61	42.336	Sorex_araneus
ENSHCOG00000018388	-	59	44.330	ENSSPUG00000002834	RRP1B	69	43.341	Sphenodon_punctatus
ENSHCOG00000018388	-	64	59.122	ENSSPAG00000005370	-	84	52.913	Stegastes_partitus
ENSHCOG00000018388	-	56	48.936	ENSSSCG00000021698	RRP1B	65	48.936	Sus_scrofa
ENSHCOG00000018388	-	56	44.667	ENSTGUG00000005926	RRP1B	63	44.667	Taeniopygia_guttata
ENSHCOG00000018388	-	56	59.375	ENSTNIG00000005053	rrp1	72	59.375	Tetraodon_nigroviridis
ENSHCOG00000018388	-	59	38.259	ENSTBEG00000000422	RRP1B	83	38.259	Tupaia_belangeri
ENSHCOG00000018388	-	61	39.437	ENSTTRG00000000723	RRP1B	68	39.655	Tursiops_truncatus
ENSHCOG00000018388	-	60	43.750	ENSUAMG00000026765	RRP1B	73	40.789	Ursus_americanus
ENSHCOG00000018388	-	58	41.892	ENSUMAG00000025510	RRP1B	89	41.892	Ursus_maritimus
ENSHCOG00000018388	-	58	42.969	ENSVVUG00000024509	RRP1B	63	44.531	Vulpes_vulpes
ENSHCOG00000018388	-	62	38.537	ENSXETG00000013683	rrp1b	75	38.443	Xenopus_tropicalis
ENSHCOG00000018388	-	76	55.819	ENSXMAG00000023123	-	100	43.162	Xiphophorus_maculatus