EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000018428 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 563 bases
Position: chrLVHJ01058440.1:711-1273
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000014928	RRM_1	PF00076.22	7.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027878	-	375	-	ENSHCOP00000014928	124 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000018428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000018428's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000018428	-	74	34.783	ENSHCOG00000017795	-	51	36.364
ENSHCOG00000018428	-	89	88.618	ENSHCOG00000017311	srsf9	51	88.618
ENSHCOG00000018428	-	90	99.099	ENSHCOG00000017326	srsf9	93	99.099
ENSHCOG00000018428	-	74	35.870	ENSHCOG00000000149	srsf3b	59	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000018428	-	83	69.524	ENSG00000111786	SRSF9	88	71.429	Homo_sapiens
ENSHCOG00000018428	-	92	66.379	ENSANAG00000035910	SRSF9	52	68.966	Aotus_nancymaae
ENSHCOG00000018428	-	83	69.524	ENSCJAG00000001187	SRSF9	88	71.429	Callithrix_jacchus
ENSHCOG00000018428	-	83	69.524	ENSCCAG00000036053	SRSF9	88	71.429	Cebus_capucinus
ENSHCOG00000018428	-	76	61.856	ENSCATG00000000421	-	53	61.856	Cercocebus_atys
ENSHCOG00000018428	-	83	69.524	ENSCATG00000021315	SRSF9	88	71.429	Cercocebus_atys
ENSHCOG00000018428	-	87	45.455	ENSETEG00000002606	SRSF9	50	45.455	Echinops_telfairi
ENSHCOG00000018428	-	83	69.524	ENSECAG00000009116	SRSF9	88	71.429	Equus_caballus
ENSHCOG00000018428	-	85	76.471	ENSGMOG00000007980	srsf9	52	63.889	Gadus_morhua
ENSHCOG00000018428	-	85	81.579	ENSGAFG00000009123	srsf9	53	82.456	Gambusia_affinis
ENSHCOG00000018428	-	84	54.808	ENSGGOG00000022012	-	88	54.808	Gorilla_gorilla
ENSHCOG00000018428	-	83	69.524	ENSSTOG00000007344	SRSF9	88	71.429	Ictidomys_tridecemlineatus
ENSHCOG00000018428	-	93	65.812	ENSJJAG00000013374	Srsf9	53	65.812	Jaculus_jaculus
ENSHCOG00000018428	-	90	86.607	ENSLBEG00000017430	srsf9	50	72.388	Labrus_bergylta
ENSHCOG00000018428	-	85	68.750	ENSLACG00000018228	SRSF9	50	72.321	Latimeria_chalumnae
ENSHCOG00000018428	-	89	55.455	ENSMMUG00000040941	-	54	54.128	Macaca_mulatta
ENSHCOG00000018428	-	83	69.524	ENSMNEG00000044129	SRSF9	88	71.429	Macaca_nemestrina
ENSHCOG00000018428	-	82	70.192	ENSMLEG00000041155	SRSF9	50	73.077	Mandrillus_leucophaeus
ENSHCOG00000018428	-	83	69.524	ENSMICG00000008674	SRSF9	88	71.429	Microcebus_murinus
ENSHCOG00000018428	-	83	72.381	ENSMUSG00000029538	Srsf9	56	80.000	Mus_musculus
ENSHCOG00000018428	-	83	69.524	ENSNLEG00000015661	SRSF9	88	71.429	Nomascus_leucogenys
ENSHCOG00000018428	-	84	62.264	ENSNLEG00000033316	-	86	62.264	Nomascus_leucogenys
ENSHCOG00000018428	-	84	72.115	ENSMEUG00000004069	SRSF9	66	73.077	Notamacropus_eugenii
ENSHCOG00000018428	-	83	69.524	ENSODEG00000006061	SRSF9	87	71.698	Octodon_degus
ENSHCOG00000018428	-	84	61.905	ENSPPAG00000026547	-	89	61.905	Pan_paniscus
ENSHCOG00000018428	-	83	69.524	ENSPTRG00000005535	SRSF9	88	71.429	Pan_troglodytes
ENSHCOG00000018428	-	84	61.905	ENSPTRG00000052688	-	89	61.905	Pan_troglodytes
ENSHCOG00000018428	-	83	69.524	ENSPANG00000016072	SRSF9	88	71.429	Papio_anubis
ENSHCOG00000018428	-	83	69.524	ENSPCOG00000015115	SRSF9	88	71.429	Propithecus_coquereli
ENSHCOG00000018428	-	81	69.524	ENSSPUG00000015680	SRSF9	50	67.797	Sphenodon_punctatus
ENSHCOG00000018428	-	91	78.125	ENSTRUG00000012723	srsf9	52	78.125	Takifugu_rubripes
ENSHCOG00000018428	-	83	69.524	ENSUAMG00000015527	SRSF9	88	71.429	Ursus_americanus
ENSHCOG00000018428	-	83	72.381	ENSVVUG00000021065	SRSF9	88	71.429	Vulpes_vulpes
ENSHCOG00000018428	-	85	80.702	ENSXMAG00000001438	srsf9	54	81.579	Xiphophorus_maculatus