EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000018461 (Gene tree)
Gene ID: 109531479
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 8136 bases
Position: chrKV880440.1:168284-176419
Accession: 109531479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000014935	dsrm	PF00035.26	1.6e-45	1	4
ENSHCOP00000014935	dsrm	PF00035.26	1.6e-45	2	4
ENSHCOP00000014935	dsrm	PF00035.26	1.6e-45	3	4
ENSHCOP00000014935	dsrm	PF00035.26	1.6e-45	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000022693	-	2999	XM_019895787	ENSHCOP00000014935	693 (aa)	XP_019751346	UPI00094F2A11

Gene Model

Click here to download ENSHCOG00000018461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000018461's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000018461	stau1	84	49.256	ENSHCOG00000004724	stau2	88	49.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000018461	stau1	92	68.156	ENSG00000124214	STAU1	99	71.227	Homo_sapiens
ENSHCOG00000018461	stau1	100	85.201	ENSAPOG00000017260	stau1	100	85.201	Acanthochromis_polyacanthus
ENSHCOG00000018461	stau1	92	70.140	ENSAMEG00000013681	STAU1	91	69.626	Ailuropoda_melanoleuca
ENSHCOG00000018461	stau1	100	83.333	ENSACIG00000015918	stau1	100	83.190	Amphilophus_citrinellus
ENSHCOG00000018461	stau1	100	85.920	ENSAOCG00000012224	stau1	100	85.920	Amphiprion_ocellaris
ENSHCOG00000018461	stau1	100	86.207	ENSAPEG00000012308	stau1	100	86.207	Amphiprion_percula
ENSHCOG00000018461	stau1	100	85.653	ENSATEG00000024600	stau1	100	86.248	Anabas_testudineus
ENSHCOG00000018461	stau1	99	68.472	ENSAPLG00000010527	STAU1	97	69.540	Anas_platyrhynchos
ENSHCOG00000018461	stau1	99	69.559	ENSACAG00000015909	STAU1	96	71.281	Anolis_carolinensis
ENSHCOG00000018461	stau1	92	67.219	ENSANAG00000032714	STAU1	99	67.002	Aotus_nancymaae
ENSHCOG00000018461	stau1	100	84.648	ENSACLG00000012270	stau1	100	84.648	Astatotilapia_calliptera
ENSHCOG00000018461	stau1	92	76.517	ENSAMXG00000016812	stau1	99	76.517	Astyanax_mexicanus
ENSHCOG00000018461	stau1	92	68.097	ENSBTAG00000000241	STAU1	94	68.097	Bos_taurus
ENSHCOG00000018461	stau1	94	66.306	ENSCJAG00000016233	STAU1	94	68.097	Callithrix_jacchus
ENSHCOG00000018461	stau1	92	68.971	ENSCAFG00000011347	STAU1	95	67.994	Canis_familiaris
ENSHCOG00000018461	stau1	92	68.971	ENSCAFG00020017123	STAU1	99	69.180	Canis_lupus_dingo
ENSHCOG00000018461	stau1	92	68.097	ENSCHIG00000001799	-	99	64.706	Capra_hircus
ENSHCOG00000018461	stau1	92	66.791	ENSTSYG00000036179	-	94	66.791	Carlito_syrichta
ENSHCOG00000018461	stau1	71	70.221	ENSCAPG00000017041	STAU1	99	70.020	Cavia_aperea
ENSHCOG00000018461	stau1	70	67.606	ENSCPOG00000005566	STAU1	99	67.606	Cavia_porcellus
ENSHCOG00000018461	stau1	92	67.219	ENSCCAG00000034339	STAU1	95	67.343	Cebus_capucinus
ENSHCOG00000018461	stau1	92	71.757	ENSCATG00000028474	STAU1	99	70.378	Cercocebus_atys
ENSHCOG00000018461	stau1	71	57.056	ENSCLAG00000002784	-	99	56.452	Chinchilla_lanigera
ENSHCOG00000018461	stau1	70	71.227	ENSCLAG00000006516	-	99	71.227	Chinchilla_lanigera
ENSHCOG00000018461	stau1	71	71.429	ENSCSAG00000014986	STAU1	99	71.429	Chlorocebus_sabaeus
ENSHCOG00000018461	stau1	92	68.773	ENSCHOG00000001511	STAU1	94	68.901	Choloepus_hoffmanni
ENSHCOG00000018461	stau1	100	69.633	ENSCPBG00000026741	STAU1	96	71.365	Chrysemys_picta_bellii
ENSHCOG00000018461	stau1	92	68.343	ENSCANG00000039220	STAU1	94	68.470	Colobus_angolensis_palliatus
ENSHCOG00000018461	stau1	70	68.008	ENSCGRG00001013453	Stau1	99	68.008	Cricetulus_griseus_chok1gshd
ENSHCOG00000018461	stau1	70	68.008	ENSCGRG00000007216	Stau1	99	68.008	Cricetulus_griseus_crigri
ENSHCOG00000018461	stau1	100	73.633	ENSCSEG00000000792	stau1	100	74.474	Cynoglossus_semilaevis
ENSHCOG00000018461	stau1	92	80.279	ENSCVAG00000005906	stau1	100	81.076	Cyprinodon_variegatus
ENSHCOG00000018461	stau1	100	76.040	ENSDARG00000044182	stau1	100	77.201	Danio_rerio
ENSHCOG00000018461	stau1	92	68.587	ENSDNOG00000014933	STAU1	92	68.529	Dasypus_novemcinctus
ENSHCOG00000018461	stau1	70	70.265	ENSDORG00000030220	Stau1	99	70.265	Dipodomys_ordii
ENSHCOG00000018461	stau1	67	75.333	ENSETEG00000018235	STAU1	82	75.333	Echinops_telfairi
ENSHCOG00000018461	stau1	92	69.444	ENSEASG00005023343	STAU1	96	69.444	Equus_asinus_asinus
ENSHCOG00000018461	stau1	92	70.031	ENSECAG00000012894	STAU1	96	69.718	Equus_caballus
ENSHCOG00000018461	stau1	64	76.020	ENSEEUG00000014344	STAU1	68	76.020	Erinaceus_europaeus
ENSHCOG00000018461	stau1	99	76.695	ENSELUG00000002529	stau1	99	78.660	Esox_lucius
ENSHCOG00000018461	stau1	92	69.278	ENSFCAG00000001447	STAU1	99	66.197	Felis_catus
ENSHCOG00000018461	stau1	99	70.714	ENSFALG00000012940	STAU1	97	71.513	Ficedula_albicollis
ENSHCOG00000018461	stau1	71	53.815	ENSFDAG00000020837	-	99	53.213	Fukomys_damarensis
ENSHCOG00000018461	stau1	70	70.423	ENSFDAG00000014119	-	99	70.423	Fukomys_damarensis
ENSHCOG00000018461	stau1	99	82.615	ENSFHEG00000013517	stau1	99	82.615	Fundulus_heteroclitus
ENSHCOG00000018461	stau1	100	67.318	ENSGMOG00000016850	stau1	100	66.899	Gadus_morhua
ENSHCOG00000018461	stau1	99	70.630	ENSGALG00000004736	STAU1	97	71.810	Gallus_gallus
ENSHCOG00000018461	stau1	99	82.471	ENSGAFG00000010437	stau1	99	82.471	Gambusia_affinis
ENSHCOG00000018461	stau1	100	82.640	ENSGACG00000001352	stau1	100	82.640	Gasterosteus_aculeatus
ENSHCOG00000018461	stau1	100	70.370	ENSGAGG00000009825	STAU1	96	72.156	Gopherus_agassizii
ENSHCOG00000018461	stau1	92	64.683	ENSGGOG00000025351	STAU1	99	75.414	Gorilla_gorilla
ENSHCOG00000018461	stau1	100	84.505	ENSHBUG00000023668	stau1	100	84.505	Haplochromis_burtoni
ENSHCOG00000018461	stau1	70	71.894	ENSHGLG00000008730	STAU1	99	71.894	Heterocephalus_glaber_female
ENSHCOG00000018461	stau1	70	71.894	ENSHGLG00100000098	STAU1	99	71.894	Heterocephalus_glaber_male
ENSHCOG00000018461	stau1	100	72.230	ENSIPUG00000023725	stau1	100	71.942	Ictalurus_punctatus
ENSHCOG00000018461	stau1	70	71.283	ENSSTOG00000003634	STAU1	99	71.283	Ictidomys_tridecemlineatus
ENSHCOG00000018461	stau1	70	70.061	ENSJJAG00000020032	Stau1	99	70.061	Jaculus_jaculus
ENSHCOG00000018461	stau1	99	80.029	ENSKMAG00000007135	stau1	99	80.891	Kryptolebias_marmoratus
ENSHCOG00000018461	stau1	100	83.764	ENSLBEG00000020172	stau1	100	83.764	Labrus_bergylta
ENSHCOG00000018461	stau1	98	70.216	ENSLACG00000016157	STAU1	94	71.768	Latimeria_chalumnae
ENSHCOG00000018461	stau1	99	72.374	ENSLOCG00000003134	stau1	96	74.850	Lepisosteus_oculatus
ENSHCOG00000018461	stau1	72	71.485	ENSLAFG00000003238	STAU1	98	71.485	Loxodonta_africana
ENSHCOG00000018461	stau1	92	71.757	ENSMFAG00000040931	STAU1	99	76.119	Macaca_fascicularis
ENSHCOG00000018461	stau1	92	64.683	ENSMMUG00000002302	STAU1	99	76.119	Macaca_mulatta
ENSHCOG00000018461	stau1	92	70.868	ENSMNEG00000033821	STAU1	99	70.378	Macaca_nemestrina
ENSHCOG00000018461	stau1	92	68.343	ENSMLEG00000031383	STAU1	94	68.470	Mandrillus_leucophaeus
ENSHCOG00000018461	stau1	100	85.201	ENSMAMG00000017586	stau1	100	86.078	Mastacembelus_armatus
ENSHCOG00000018461	stau1	100	84.770	ENSMZEG00005015605	stau1	100	84.770	Maylandia_zebra
ENSHCOG00000018461	stau1	99	68.472	ENSMGAG00000004719	STAU1	97	69.540	Meleagris_gallopavo
ENSHCOG00000018461	stau1	70	68.008	ENSMAUG00000013846	Stau1	99	68.008	Mesocricetus_auratus
ENSHCOG00000018461	stau1	92	66.851	ENSMICG00000001995	STAU1	95	68.919	Microcebus_murinus
ENSHCOG00000018461	stau1	70	69.057	ENSMOCG00000018743	Stau1	99	68.612	Microtus_ochrogaster
ENSHCOG00000018461	stau1	100	82.927	ENSMMOG00000015455	stau1	100	82.927	Mola_mola
ENSHCOG00000018461	stau1	96	70.387	ENSMODG00000016276	STAU1	96	72.050	Monodelphis_domestica
ENSHCOG00000018461	stau1	100	84.770	ENSMALG00000000045	stau1	100	84.770	Monopterus_albus
ENSHCOG00000018461	stau1	70	69.121	MGP_CAROLIEiJ_G0024699	Stau1	99	69.121	Mus_caroli
ENSHCOG00000018461	stau1	70	68.916	ENSMUSG00000039536	Stau1	99	68.916	Mus_musculus
ENSHCOG00000018461	stau1	70	68.635	MGP_PahariEiJ_G0026141	Stau1	99	68.635	Mus_pahari
ENSHCOG00000018461	stau1	70	68.916	MGP_SPRETEiJ_G0025619	Stau1	99	68.916	Mus_spretus
ENSHCOG00000018461	stau1	92	69.315	ENSMPUG00000017581	STAU1	95	69.315	Mustela_putorius_furo
ENSHCOG00000018461	stau1	92	69.141	ENSMLUG00000008407	STAU1	92	69.141	Myotis_lucifugus
ENSHCOG00000018461	stau1	70	69.014	ENSNGAG00000007108	Stau1	99	69.014	Nannospalax_galili
ENSHCOG00000018461	stau1	100	84.505	ENSNBRG00000017596	stau1	100	84.505	Neolamprologus_brichardi
ENSHCOG00000018461	stau1	92	67.970	ENSNLEG00000006955	STAU1	99	70.179	Nomascus_leucogenys
ENSHCOG00000018461	stau1	66	76.790	ENSMEUG00000003263	STAU1	80	76.087	Notamacropus_eugenii
ENSHCOG00000018461	stau1	77	66.729	ENSOPRG00000014569	STAU1	93	66.357	Ochotona_princeps
ENSHCOG00000018461	stau1	71	71.026	ENSODEG00000006523	STAU1	99	71.026	Octodon_degus
ENSHCOG00000018461	stau1	100	81.869	ENSONIG00000004152	stau1	99	81.869	Oreochromis_niloticus
ENSHCOG00000018461	stau1	96	70.606	ENSOANG00000006394	STAU1	96	70.015	Ornithorhynchus_anatinus
ENSHCOG00000018461	stau1	92	69.727	ENSOCUG00000006214	STAU1	94	69.727	Oryctolagus_cuniculus
ENSHCOG00000018461	stau1	99	81.727	ENSOMEG00000002388	stau1	99	81.727	Oryzias_melastigma
ENSHCOG00000018461	stau1	92	67.598	ENSOGAG00000002127	STAU1	92	69.727	Otolemur_garnettii
ENSHCOG00000018461	stau1	71	50.201	ENSOGAG00000028222	-	98	48.692	Otolemur_garnettii
ENSHCOG00000018461	stau1	92	69.255	ENSOARG00000012204	STAU1	95	69.255	Ovis_aries
ENSHCOG00000018461	stau1	92	62.821	ENSPPAG00000032023	STAU1	99	75.414	Pan_paniscus
ENSHCOG00000018461	stau1	92	70.703	ENSPPRG00000003436	STAU1	99	71.630	Panthera_pardus
ENSHCOG00000018461	stau1	92	70.703	ENSPTIG00000011768	STAU1	99	70.635	Panthera_tigris_altaica
ENSHCOG00000018461	stau1	92	62.821	ENSPTRG00000023130	STAU1	99	75.414	Pan_troglodytes
ENSHCOG00000018461	stau1	92	71.757	ENSPANG00000020560	STAU1	94	71.757	Papio_anubis
ENSHCOG00000018461	stau1	100	74.217	ENSPKIG00000024588	stau1	100	74.893	Paramormyrops_kingsleyae
ENSHCOG00000018461	stau1	99	70.613	ENSPSIG00000010731	STAU1	95	72.305	Pelodiscus_sinensis
ENSHCOG00000018461	stau1	99	80.201	ENSPMGG00000018553	stau1	100	79.513	Periophthalmus_magnuspinnatus
ENSHCOG00000018461	stau1	70	68.410	ENSPEMG00000022045	Stau1	99	68.410	Peromyscus_maniculatus_bairdii
ENSHCOG00000018461	stau1	99	68.376	ENSPCIG00000023269	STAU1	98	71.540	Phascolarctos_cinereus
ENSHCOG00000018461	stau1	100	81.948	ENSPFOG00000017253	stau1	99	81.923	Poecilia_formosa
ENSHCOG00000018461	stau1	58	81.546	ENSPLAG00000014829	stau1	97	77.320	Poecilia_latipinna
ENSHCOG00000018461	stau1	100	78.940	ENSPMEG00000007495	stau1	99	78.910	Poecilia_mexicana
ENSHCOG00000018461	stau1	100	82.092	ENSPREG00000003477	stau1	99	82.066	Poecilia_reticulata
ENSHCOG00000018461	stau1	92	68.343	ENSPPYG00000011111	STAU1	94	67.537	Pongo_abelii
ENSHCOG00000018461	stau1	73	62.327	ENSPCAG00000002459	STAU1	95	64.315	Procavia_capensis
ENSHCOG00000018461	stau1	92	67.598	ENSPCOG00000027746	STAU1	99	69.781	Propithecus_coquereli
ENSHCOG00000018461	stau1	62	77.333	ENSPVAG00000015019	STAU1	82	77.333	Pteropus_vampyrus
ENSHCOG00000018461	stau1	100	84.505	ENSPNYG00000014436	stau1	100	84.505	Pundamilia_nyererei
ENSHCOG00000018461	stau1	100	73.963	ENSPNAG00000011323	stau1	100	75.536	Pygocentrus_nattereri
ENSHCOG00000018461	stau1	70	68.209	ENSRNOG00000007781	Stau1	99	68.209	Rattus_norvegicus
ENSHCOG00000018461	stau1	71	70.600	ENSRBIG00000037345	STAU1	99	70.400	Rhinopithecus_bieti
ENSHCOG00000018461	stau1	92	72.340	ENSRROG00000039008	STAU1	99	70.400	Rhinopithecus_roxellana
ENSHCOG00000018461	stau1	92	67.219	ENSSBOG00000034448	STAU1	99	68.200	Saimiri_boliviensis_boliviensis
ENSHCOG00000018461	stau1	96	72.710	ENSSHAG00000009492	STAU1	96	71.894	Sarcophilus_harrisii
ENSHCOG00000018461	stau1	100	76.504	ENSSFOG00015021497	stau1	100	76.184	Scleropages_formosus
ENSHCOG00000018461	stau1	100	84.195	ENSSMAG00000017410	stau1	100	84.195	Scophthalmus_maximus
ENSHCOG00000018461	stau1	100	86.207	ENSSDUG00000019439	stau1	100	86.207	Seriola_dumerili
ENSHCOG00000018461	stau1	100	86.494	ENSSLDG00000025040	stau1	100	86.494	Seriola_lalandi_dorsalis
ENSHCOG00000018461	stau1	99	69.886	ENSSPUG00000017983	STAU1	95	72.868	Sphenodon_punctatus
ENSHCOG00000018461	stau1	100	86.207	ENSSPAG00000019275	stau1	100	86.207	Stegastes_partitus
ENSHCOG00000018461	stau1	92	68.156	ENSSSCG00000027444	STAU1	99	71.227	Sus_scrofa
ENSHCOG00000018461	stau1	100	68.138	ENSTGUG00000008784	STAU1	97	68.911	Taeniopygia_guttata
ENSHCOG00000018461	stau1	100	82.328	ENSTRUG00000005837	stau1	100	83.046	Takifugu_rubripes
ENSHCOG00000018461	stau1	97	80.798	ENSTNIG00000014732	stau1	99	80.798	Tetraodon_nigroviridis
ENSHCOG00000018461	stau1	92	58.287	ENSTBEG00000009404	STAU1	95	58.287	Tupaia_belangeri
ENSHCOG00000018461	stau1	66	71.304	ENSTTRG00000004285	STAU1	79	71.304	Tursiops_truncatus
ENSHCOG00000018461	stau1	71	70.437	ENSUAMG00000025449	STAU1	99	70.040	Ursus_americanus
ENSHCOG00000018461	stau1	54	67.539	ENSUMAG00000024475	STAU1	88	67.016	Ursus_maritimus
ENSHCOG00000018461	stau1	92	67.970	ENSVPAG00000001313	STAU1	94	68.097	Vicugna_pacos
ENSHCOG00000018461	stau1	92	69.124	ENSVVUG00000022325	STAU1	95	68.147	Vulpes_vulpes
ENSHCOG00000018461	stau1	96	67.814	ENSXETG00000001783	stau1	95	67.515	Xenopus_tropicalis
ENSHCOG00000018461	stau1	54	80.965	ENSXCOG00000008804	stau1	94	79.625	Xiphophorus_couchianus
ENSHCOG00000018461	stau1	99	82.040	ENSXMAG00000016175	stau1	99	82.040	Xiphophorus_maculatus