EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000018462 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 11651 bases
Position: chrKV880315.1:868567-880217
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000026987	ResIII	PF04851.15	1.1e-09	1	1
ENSHCOP00000026973	ResIII	PF04851.15	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027873	-	1143	-	ENSHCOP00000026973	380 (aa)	-	-
ENSHCOT00000022684	-	1359	-	ENSHCOP00000026987	452 (aa)	-	-
ENSHCOT00000022696	-	1263	-	ENSHCOP00000026996	420 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000018462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000018462's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000018462	-	71	47.324	ENSHCOG00000012108	-	62	47.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000018462	-	70	81.073	ENSGAFG00000015359	-	88	80.892	Gambusia_affinis
ENSHCOG00000018462	-	71	79.630	ENSIPUG00000000057	-	89	79.688	Ictalurus_punctatus
ENSHCOG00000018462	-	77	72.180	ENSLACG00000022233	-	51	78.125	Latimeria_chalumnae
ENSHCOG00000018462	-	63	80.556	ENSORLG00015005151	-	85	71.968	Oryzias_latipes_hsok
ENSHCOG00000018462	-	61	86.833	ENSPMGG00000006573	-	77	86.691	Periophthalmus_magnuspinnatus
ENSHCOG00000018462	-	61	86.643	ENSSPAG00000004124	-	82	77.848	Stegastes_partitus