EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000018521 (Gene tree)
Gene ID: 109509643
Gene Symbol: -
Alias: -
Full Name: DNA-(apurinic or apyrimidinic site) lyase 2-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 1154 bases
Position: chrLVHJ01058370.1:2-1155
Accession: 109509643
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000015002	Exo_endo_phos	PF03372.23	3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000022783	-	582	XM_019859471	ENSHCOP00000015002	194 (aa)	XP_019715030	-

Gene Model

Click here to download ENSHCOG00000018521's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000018521's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000018521	-	99	61.353	ENSCAFG00020013818	APEX2	86	61.353	Canis_lupus_dingo
ENSHCOG00000018521	-	100	61.836	ENSCGRG00000009667	Apex2	85	61.836	Cricetulus_griseus_crigri
ENSHCOG00000018521	-	100	62.319	ENSDORG00000024412	-	89	62.319	Dipodomys_ordii
ENSHCOG00000018521	-	100	61.538	ENSFDAG00000008076	APEX2	88	61.538	Fukomys_damarensis
ENSHCOG00000018521	-	96	73.118	ENSGMOG00000019681	apex2	53	73.118	Gadus_morhua
ENSHCOG00000018521	-	100	61.058	ENSHGLG00000000273	APEX2	89	61.058	Heterocephalus_glaber_female
ENSHCOG00000018521	-	100	60.096	ENSHGLG00100006734	-	98	60.096	Heterocephalus_glaber_male
ENSHCOG00000018521	-	100	62.500	ENSSTOG00000025121	APEX2	85	62.500	Ictidomys_tridecemlineatus
ENSHCOG00000018521	-	100	60.870	ENSJJAG00000019611	Apex2	90	60.870	Jaculus_jaculus
ENSHCOG00000018521	-	90	60.638	ENSMAUG00000016924	-	100	60.638	Mesocricetus_auratus
ENSHCOG00000018521	-	100	60.870	ENSMOCG00000004339	Apex2	87	60.870	Microtus_ochrogaster
ENSHCOG00000018521	-	100	63.285	MGP_CAROLIEiJ_G0033484	Apex2	83	63.285	Mus_caroli
ENSHCOG00000018521	-	100	63.285	ENSMUSG00000025269	Apex2	84	63.285	Mus_musculus
ENSHCOG00000018521	-	100	63.285	MGP_PahariEiJ_G0032023	Apex2	92	63.285	Mus_pahari
ENSHCOG00000018521	-	100	63.285	MGP_SPRETEiJ_G0034654	Apex2	84	63.285	Mus_spretus
ENSHCOG00000018521	-	99	61.836	ENSNLEG00000032067	-	50	61.836	Nomascus_leucogenys
ENSHCOG00000018521	-	100	61.538	ENSODEG00000003095	-	98	61.538	Octodon_degus
ENSHCOG00000018521	-	100	60.870	ENSPEMG00000016475	Apex2	84	60.870	Peromyscus_maniculatus_bairdii
ENSHCOG00000018521	-	98	49.485	ENSSPUG00000019279	-	83	51.031	Sphenodon_punctatus
ENSHCOG00000018521	-	99	61.836	ENSUAMG00000004720	APEX2	86	61.836	Ursus_americanus
ENSHCOG00000018521	-	99	78.756	ENSXCOG00000014274	apex2	93	78.756	Xiphophorus_couchianus