EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000018630 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: si:dkey-109n11.2
Full Name: sal-like protein 3
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6490 bases
Position: chrKV880315.1:661715-668204
Accession: 109528031
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000027091	zf-C2H2	PF00096.26	5.3e-34	1	7
ENSHCOP00000027091	zf-C2H2	PF00096.26	5.3e-34	2	7
ENSHCOP00000027091	zf-C2H2	PF00096.26	5.3e-34	3	7
ENSHCOP00000027091	zf-C2H2	PF00096.26	5.3e-34	4	7
ENSHCOP00000027091	zf-C2H2	PF00096.26	5.3e-34	5	7
ENSHCOP00000027091	zf-C2H2	PF00096.26	5.3e-34	6	7
ENSHCOP00000027091	zf-C2H2	PF00096.26	5.3e-34	7	7
ENSHCOP00000027091	zf-met	PF12874.7	7.1e-09	1	2
ENSHCOP00000027091	zf-met	PF12874.7	7.1e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027933	-	3915	XM_019890297	ENSHCOP00000027091	1304 (aa)	XP_019745856	-

Gene Model

Click here to download ENSHCOG00000018630's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000018630's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000018630	-	63	72.362	ENSAPOG00000014819	-	99	74.275	Acanthochromis_polyacanthus
ENSHCOG00000018630	-	60	80.531	ENSAOCG00000022926	-	96	78.761	Amphiprion_ocellaris
ENSHCOG00000018630	-	99	71.386	ENSCSEG00000016863	-	99	70.112	Cynoglossus_semilaevis
ENSHCOG00000018630	-	99	70.203	ENSCVAG00000022101	-	99	70.601	Cyprinodon_variegatus
ENSHCOG00000018630	-	63	69.978	ENSKMAG00000018789	-	99	70.875	Kryptolebias_marmoratus
ENSHCOG00000018630	-	61	71.846	ENSMMOG00000013085	-	99	72.185	Mola_mola
ENSHCOG00000018630	-	50	48.276	MGP_CAROLIEiJ_G0029143	-	79	48.276	Mus_caroli
ENSHCOG00000018630	-	50	48.276	MGP_PahariEiJ_G0021011	-	79	48.276	Mus_pahari
ENSHCOG00000018630	-	98	74.102	ENSORLG00015019057	-	97	73.720	Oryzias_latipes_hsok
ENSHCOG00000018630	-	81	62.763	ENSPKIG00000012449	si:dkeyp-69b9.6	82	47.532	Paramormyrops_kingsleyae
ENSHCOG00000018630	-	98	73.465	ENSPFOG00000007425	-	100	73.147	Poecilia_formosa
ENSHCOG00000018630	-	99	71.102	ENSPLAG00000013476	-	99	71.183	Poecilia_latipinna
ENSHCOG00000018630	-	99	69.699	ENSPMEG00000010070	-	99	70.515	Poecilia_mexicana
ENSHCOG00000018630	-	91	75.269	ENSSFOG00015000866	si:dkeyp-69b9.6	82	50.884	Scleropages_formosus
ENSHCOG00000018630	-	63	72.973	ENSSMAG00000016019	-	99	73.964	Scophthalmus_maximus
ENSHCOG00000018630	-	62	81.967	ENSSPAG00000001452	-	99	80.328	Stegastes_partitus