EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000018670 (Gene tree)
Gene ID: 109525959
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 33675 bases
Position: chrKV880248.1:6600756-6634430
Accession: 109525959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000015095	CPSF_A	PF03178.15	2.3e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027939	-	3356	XM_019886902	ENSHCOP00000015095	1093 (aa)	XP_019742461	-

Gene Model

Click here to download ENSHCOG00000018670's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03420	Nucleotide excision repair	KEGG
hcq04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000018670's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000018670	ddb1	98	91.053	ENSG00000167986	DDB1	100	95.890	Homo_sapiens
ENSHCOG00000018670	ddb1	98	98.141	ENSAPOG00000005036	ddb1	99	98.469	Acanthochromis_polyacanthus
ENSHCOG00000018670	ddb1	98	90.985	ENSAMEG00000016518	DDB1	94	90.985	Ailuropoda_melanoleuca
ENSHCOG00000018670	ddb1	90	98.163	ENSACIG00000020624	ddb1	99	98.163	Amphilophus_citrinellus
ENSHCOG00000018670	ddb1	98	98.048	ENSAOCG00000003066	ddb1	94	98.048	Amphiprion_ocellaris
ENSHCOG00000018670	ddb1	98	98.326	ENSAPEG00000000092	ddb1	99	98.326	Amphiprion_percula
ENSHCOG00000018670	ddb1	98	98.790	ENSATEG00000020571	ddb1	97	98.790	Anabas_testudineus
ENSHCOG00000018670	ddb1	98	89.306	ENSAPLG00000007174	DDB1	94	89.306	Anas_platyrhynchos
ENSHCOG00000018670	ddb1	98	90.242	ENSACAG00000017758	DDB1	94	90.242	Anolis_carolinensis
ENSHCOG00000018670	ddb1	98	90.892	ENSANAG00000021878	DDB1	94	90.892	Aotus_nancymaae
ENSHCOG00000018670	ddb1	98	97.955	ENSACLG00000012401	ddb1	99	97.539	Astatotilapia_calliptera
ENSHCOG00000018670	ddb1	98	90.892	ENSBTAG00000021569	DDB1	88	90.892	Bos_taurus
ENSHCOG00000018670	ddb1	98	37.376	WBGene00010890	ddb-1	94	37.376	Caenorhabditis_elegans
ENSHCOG00000018670	ddb1	98	90.892	ENSCJAG00000019319	DDB1	94	90.892	Callithrix_jacchus
ENSHCOG00000018670	ddb1	98	91.341	ENSCAFG00000016264	DDB1	99	91.341	Canis_familiaris
ENSHCOG00000018670	ddb1	98	91.341	ENSCAFG00020012722	DDB1	99	91.341	Canis_lupus_dingo
ENSHCOG00000018670	ddb1	98	90.892	ENSCHIG00000014969	DDB1	94	90.892	Capra_hircus
ENSHCOG00000018670	ddb1	98	90.520	ENSTSYG00000008027	DDB1	94	90.520	Carlito_syrichta
ENSHCOG00000018670	ddb1	97	90.900	ENSCAPG00000010786	DDB1	94	90.900	Cavia_aperea
ENSHCOG00000018670	ddb1	98	90.892	ENSCPOG00000009956	DDB1	94	90.892	Cavia_porcellus
ENSHCOG00000018670	ddb1	98	90.892	ENSCCAG00000035883	DDB1	94	90.892	Cebus_capucinus
ENSHCOG00000018670	ddb1	98	89.084	ENSCATG00000044495	DDB1	94	89.084	Cercocebus_atys
ENSHCOG00000018670	ddb1	98	90.799	ENSCLAG00000004126	DDB1	94	90.799	Chinchilla_lanigera
ENSHCOG00000018670	ddb1	98	90.892	ENSCSAG00000006392	DDB1	94	90.892	Chlorocebus_sabaeus
ENSHCOG00000018670	ddb1	88	83.910	ENSCHOG00000011377	DDB1	86	83.910	Choloepus_hoffmanni
ENSHCOG00000018670	ddb1	98	90.428	ENSCPBG00000017728	DDB1	94	90.428	Chrysemys_picta_bellii
ENSHCOG00000018670	ddb1	98	61.121	ENSCING00000007437	-	94	61.121	Ciona_intestinalis
ENSHCOG00000018670	ddb1	92	60.511	ENSCSAVG00000004783	-	100	60.048	Ciona_savignyi
ENSHCOG00000018670	ddb1	98	90.892	ENSCANG00000019948	DDB1	94	90.892	Colobus_angolensis_palliatus
ENSHCOG00000018670	ddb1	98	90.985	ENSCGRG00001016599	Ddb1	98	90.205	Cricetulus_griseus_chok1gshd
ENSHCOG00000018670	ddb1	98	90.985	ENSCGRG00000013427	Ddb1	94	90.985	Cricetulus_griseus_crigri
ENSHCOG00000018670	ddb1	97	97.832	ENSCSEG00000012499	ddb1	99	96.154	Cynoglossus_semilaevis
ENSHCOG00000018670	ddb1	99	97.124	ENSCVAG00000019531	ddb1	99	97.124	Cyprinodon_variegatus
ENSHCOG00000018670	ddb1	98	91.978	ENSDARG00000074431	ddb1	94	91.978	Danio_rerio
ENSHCOG00000018670	ddb1	98	91.341	ENSDNOG00000014884	DDB1	97	91.341	Dasypus_novemcinctus
ENSHCOG00000018670	ddb1	81	94.091	ENSDORG00000000127	Ddb1	93	94.091	Dipodomys_ordii
ENSHCOG00000018670	ddb1	98	60.962	FBgn0260962	pic	94	60.962	Drosophila_melanogaster
ENSHCOG00000018670	ddb1	74	30.065	FBgn0024698	Cpsf160	63	30.065	Drosophila_melanogaster
ENSHCOG00000018670	ddb1	67	93.701	ENSETEG00000001053	-	64	93.701	Echinops_telfairi
ENSHCOG00000018670	ddb1	81	84.027	ENSEBUG00000014593	ddb1	97	84.027	Eptatretus_burgeri
ENSHCOG00000018670	ddb1	98	90.985	ENSEASG00005008184	DDB1	94	90.985	Equus_asinus_asinus
ENSHCOG00000018670	ddb1	98	90.985	ENSECAG00000012136	DDB1	94	90.985	Equus_caballus
ENSHCOG00000018670	ddb1	89	87.205	ENSEEUG00000003194	DDB1	85	87.205	Erinaceus_europaeus
ENSHCOG00000018670	ddb1	98	96.283	ENSELUG00000023868	ddb1	94	96.283	Esox_lucius
ENSHCOG00000018670	ddb1	98	90.985	ENSFCAG00000029716	DDB1	94	90.985	Felis_catus
ENSHCOG00000018670	ddb1	99	90.176	ENSFALG00000011981	DDB1	94	90.176	Ficedula_albicollis
ENSHCOG00000018670	ddb1	98	90.799	ENSFDAG00000005128	DDB1	94	90.799	Fukomys_damarensis
ENSHCOG00000018670	ddb1	88	97.826	ENSFHEG00000022133	ddb1	93	97.826	Fundulus_heteroclitus
ENSHCOG00000018670	ddb1	82	97.659	ENSGMOG00000019386	ddb1	94	97.659	Gadus_morhua
ENSHCOG00000018670	ddb1	98	90.335	ENSGALG00000042333	DDB1	94	90.335	Gallus_gallus
ENSHCOG00000018670	ddb1	99	97.586	ENSGAFG00000013142	ddb1	99	97.586	Gambusia_affinis
ENSHCOG00000018670	ddb1	98	98.037	ENSGACG00000017182	ddb1	98	98.037	Gasterosteus_aculeatus
ENSHCOG00000018670	ddb1	93	90.196	ENSGAGG00000014124	DDB1	94	90.196	Gopherus_agassizii
ENSHCOG00000018670	ddb1	98	90.892	ENSGGOG00000004052	DDB1	94	90.892	Gorilla_gorilla
ENSHCOG00000018670	ddb1	98	97.955	ENSHBUG00000008873	ddb1	94	97.955	Haplochromis_burtoni
ENSHCOG00000018670	ddb1	98	90.799	ENSHGLG00000018430	DDB1	94	90.799	Heterocephalus_glaber_female
ENSHCOG00000018670	ddb1	98	89.777	ENSHGLG00100014475	DDB1	94	89.777	Heterocephalus_glaber_male
ENSHCOG00000018670	ddb1	99	94.986	ENSIPUG00000005612	DDB1	98	95.349	Ictalurus_punctatus
ENSHCOG00000018670	ddb1	98	90.892	ENSSTOG00000007552	DDB1	94	90.892	Ictidomys_tridecemlineatus
ENSHCOG00000018670	ddb1	98	90.892	ENSJJAG00000017769	Ddb1	94	90.892	Jaculus_jaculus
ENSHCOG00000018670	ddb1	98	97.767	ENSKMAG00000002315	ddb1	100	97.767	Kryptolebias_marmoratus
ENSHCOG00000018670	ddb1	88	98.647	ENSLBEG00000017065	ddb1	99	98.647	Labrus_bergylta
ENSHCOG00000018670	ddb1	99	90.344	ENSLACG00000017611	DDB1	97	90.417	Latimeria_chalumnae
ENSHCOG00000018670	ddb1	91	86.353	ENSLOCG00000000012	ddb1	95	86.353	Lepisosteus_oculatus
ENSHCOG00000018670	ddb1	98	90.799	ENSLAFG00000011513	DDB1	94	90.799	Loxodonta_africana
ENSHCOG00000018670	ddb1	98	90.892	ENSMFAG00000042035	DDB1	94	90.892	Macaca_fascicularis
ENSHCOG00000018670	ddb1	98	90.892	ENSMMUG00000002691	DDB1	100	95.775	Macaca_mulatta
ENSHCOG00000018670	ddb1	98	90.892	ENSMNEG00000031559	DDB1	94	90.892	Macaca_nemestrina
ENSHCOG00000018670	ddb1	98	90.892	ENSMLEG00000044136	DDB1	98	89.687	Mandrillus_leucophaeus
ENSHCOG00000018670	ddb1	98	98.513	ENSMAMG00000014372	ddb1	94	98.513	Mastacembelus_armatus
ENSHCOG00000018670	ddb1	98	97.862	ENSMZEG00005013835	ddb1	94	97.862	Maylandia_zebra
ENSHCOG00000018670	ddb1	92	89.703	ENSMGAG00000004990	DDB1	94	89.703	Meleagris_gallopavo
ENSHCOG00000018670	ddb1	98	90.985	ENSMAUG00000012926	Ddb1	94	90.985	Mesocricetus_auratus
ENSHCOG00000018670	ddb1	98	91.078	ENSMICG00000013703	DDB1	94	91.078	Microcebus_murinus
ENSHCOG00000018670	ddb1	98	91.078	ENSMOCG00000020499	Ddb1	94	91.078	Microtus_ochrogaster
ENSHCOG00000018670	ddb1	90	98.776	ENSMMOG00000001758	ddb1	99	98.776	Mola_mola
ENSHCOG00000018670	ddb1	98	82.931	ENSMODG00000020353	DDB1	93	82.931	Monodelphis_domestica
ENSHCOG00000018670	ddb1	98	98.234	ENSMALG00000014071	ddb1	94	98.234	Monopterus_albus
ENSHCOG00000018670	ddb1	98	90.985	MGP_CAROLIEiJ_G0022695	Ddb1	94	90.985	Mus_caroli
ENSHCOG00000018670	ddb1	98	91.078	ENSMUSG00000024740	Ddb1	94	91.078	Mus_musculus
ENSHCOG00000018670	ddb1	98	90.985	MGP_PahariEiJ_G0014189	Ddb1	94	90.985	Mus_pahari
ENSHCOG00000018670	ddb1	98	91.078	MGP_SPRETEiJ_G0023609	Ddb1	94	91.078	Mus_spretus
ENSHCOG00000018670	ddb1	98	87.732	ENSMPUG00000014200	DDB1	94	87.732	Mustela_putorius_furo
ENSHCOG00000018670	ddb1	98	91.078	ENSMLUG00000013232	DDB1	94	91.078	Myotis_lucifugus
ENSHCOG00000018670	ddb1	98	90.892	ENSNGAG00000009384	Ddb1	94	90.892	Nannospalax_galili
ENSHCOG00000018670	ddb1	98	98.048	ENSNBRG00000019581	ddb1	94	98.048	Neolamprologus_brichardi
ENSHCOG00000018670	ddb1	98	88.622	ENSNLEG00000002022	DDB1	94	88.622	Nomascus_leucogenys
ENSHCOG00000018670	ddb1	88	95.455	ENSMEUG00000001099	DDB1	87	95.455	Notamacropus_eugenii
ENSHCOG00000018670	ddb1	88	81.696	ENSOPRG00000008254	DDB1	85	81.696	Ochotona_princeps
ENSHCOG00000018670	ddb1	99	90.463	ENSODEG00000002419	DDB1	94	90.892	Octodon_degus
ENSHCOG00000018670	ddb1	98	98.048	ENSONIG00000005804	ddb1	94	98.048	Oreochromis_niloticus
ENSHCOG00000018670	ddb1	89	90.393	ENSOANG00000004897	DDB1	94	90.393	Ornithorhynchus_anatinus
ENSHCOG00000018670	ddb1	98	90.985	ENSOCUG00000001667	DDB1	94	90.985	Oryctolagus_cuniculus
ENSHCOG00000018670	ddb1	98	97.207	ENSORLG00000001399	ddb1	98	97.022	Oryzias_latipes
ENSHCOG00000018670	ddb1	98	97.114	ENSORLG00020001277	ddb1	95	97.114	Oryzias_latipes_hni
ENSHCOG00000018670	ddb1	98	97.207	ENSORLG00015002080	ddb1	99	97.207	Oryzias_latipes_hsok
ENSHCOG00000018670	ddb1	99	97.307	ENSOMEG00000006181	ddb1	97	97.307	Oryzias_melastigma
ENSHCOG00000018670	ddb1	98	91.078	ENSOGAG00000016103	DDB1	94	91.078	Otolemur_garnettii
ENSHCOG00000018670	ddb1	98	90.892	ENSOARG00000011716	DDB1	93	90.892	Ovis_aries
ENSHCOG00000018670	ddb1	98	90.892	ENSPPAG00000035343	DDB1	94	90.892	Pan_paniscus
ENSHCOG00000018670	ddb1	98	90.985	ENSPPRG00000013300	DDB1	94	90.985	Panthera_pardus
ENSHCOG00000018670	ddb1	97	90.995	ENSPTIG00000006909	DDB1	93	90.995	Panthera_tigris_altaica
ENSHCOG00000018670	ddb1	98	90.892	ENSPTRG00000003737	DDB1	94	90.892	Pan_troglodytes
ENSHCOG00000018670	ddb1	98	90.892	ENSPANG00000000242	DDB1	94	90.892	Papio_anubis
ENSHCOG00000018670	ddb1	99	94.936	ENSPKIG00000019213	ddb1	95	94.936	Paramormyrops_kingsleyae
ENSHCOG00000018670	ddb1	97	90.000	ENSPSIG00000013275	DDB1	94	90.000	Pelodiscus_sinensis
ENSHCOG00000018670	ddb1	90	98.265	ENSPMGG00000021179	ddb1	99	98.265	Periophthalmus_magnuspinnatus
ENSHCOG00000018670	ddb1	98	90.985	ENSPEMG00000012241	Ddb1	94	90.985	Peromyscus_maniculatus_bairdii
ENSHCOG00000018670	ddb1	93	86.248	ENSPMAG00000008479	ddb1	100	86.248	Petromyzon_marinus
ENSHCOG00000018670	ddb1	98	91.171	ENSPCIG00000002643	DDB1	94	91.171	Phascolarctos_cinereus
ENSHCOG00000018670	ddb1	98	97.946	ENSPFOG00000002768	ddb1	94	97.946	Poecilia_formosa
ENSHCOG00000018670	ddb1	99	97.235	ENSPLAG00000017227	ddb1	99	97.235	Poecilia_latipinna
ENSHCOG00000018670	ddb1	99	97.235	ENSPMEG00000011398	ddb1	99	97.235	Poecilia_mexicana
ENSHCOG00000018670	ddb1	99	97.410	ENSPREG00000004440	ddb1	98	97.410	Poecilia_reticulata
ENSHCOG00000018670	ddb1	98	87.266	ENSPPYG00000003193	DDB1	93	87.266	Pongo_abelii
ENSHCOG00000018670	ddb1	82	88.944	ENSPCAG00000011040	DDB1	79	88.944	Procavia_capensis
ENSHCOG00000018670	ddb1	98	90.791	ENSPCOG00000015176	DDB1	94	90.791	Propithecus_coquereli
ENSHCOG00000018670	ddb1	98	90.799	ENSPVAG00000003847	DDB1	94	90.799	Pteropus_vampyrus
ENSHCOG00000018670	ddb1	98	96.186	ENSPNAG00000006635	ddb1	97	96.186	Pygocentrus_nattereri
ENSHCOG00000018670	ddb1	98	91.078	ENSRNOG00000020715	Ddb1	94	91.078	Rattus_norvegicus
ENSHCOG00000018670	ddb1	98	90.892	ENSRBIG00000033611	DDB1	95	90.892	Rhinopithecus_bieti
ENSHCOG00000018670	ddb1	98	90.892	ENSRROG00000041407	DDB1	94	90.892	Rhinopithecus_roxellana
ENSHCOG00000018670	ddb1	98	90.985	ENSSBOG00000019775	DDB1	94	90.985	Saimiri_boliviensis_boliviensis
ENSHCOG00000018670	ddb1	92	88.569	ENSSHAG00000011600	DDB1	94	88.569	Sarcophilus_harrisii
ENSHCOG00000018670	ddb1	98	96.097	ENSSFOG00015011151	ddb1	97	96.097	Scleropages_formosus
ENSHCOG00000018670	ddb1	98	97.862	ENSSMAG00000009495	ddb1	94	97.862	Scophthalmus_maximus
ENSHCOG00000018670	ddb1	98	98.327	ENSSDUG00000004642	ddb1	94	98.327	Seriola_dumerili
ENSHCOG00000018670	ddb1	98	98.327	ENSSLDG00000015804	ddb1	94	98.327	Seriola_lalandi_dorsalis
ENSHCOG00000018670	ddb1	71	94.340	ENSSARG00000003290	-	71	94.340	Sorex_araneus
ENSHCOG00000018670	ddb1	98	90.335	ENSSPUG00000019338	DDB1	94	90.335	Sphenodon_punctatus
ENSHCOG00000018670	ddb1	98	98.696	ENSSPAG00000009888	ddb1	99	98.696	Stegastes_partitus
ENSHCOG00000018670	ddb1	98	90.739	ENSSSCG00000013094	DDB1	94	90.739	Sus_scrofa
ENSHCOG00000018670	ddb1	98	90.713	ENSTGUG00000006414	DDB1	94	90.713	Taeniopygia_guttata
ENSHCOG00000018670	ddb1	99	96.044	ENSTRUG00000016682	ddb1	99	96.044	Takifugu_rubripes
ENSHCOG00000018670	ddb1	86	91.045	ENSTNIG00000009565	ddb1	94	91.045	Tetraodon_nigroviridis
ENSHCOG00000018670	ddb1	90	85.551	ENSTTRG00000011055	DDB1	88	85.551	Tursiops_truncatus
ENSHCOG00000018670	ddb1	98	91.341	ENSUAMG00000017793	DDB1	93	91.341	Ursus_americanus
ENSHCOG00000018670	ddb1	98	91.341	ENSUMAG00000011788	DDB1	98	91.341	Ursus_maritimus
ENSHCOG00000018670	ddb1	88	86.024	ENSVPAG00000007963	DDB1	86	86.024	Vicugna_pacos
ENSHCOG00000018670	ddb1	98	90.985	ENSVVUG00000004987	DDB1	94	90.985	Vulpes_vulpes
ENSHCOG00000018670	ddb1	98	87.963	ENSXETG00000008820	ddb1	94	87.963	Xenopus_tropicalis
ENSHCOG00000018670	ddb1	90	97.857	ENSXCOG00000013956	ddb1	99	97.857	Xiphophorus_couchianus
ENSHCOG00000018670	ddb1	99	97.679	ENSXMAG00000000022	ddb1	99	97.679	Xiphophorus_maculatus